RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 PKD1P98161 4303 aa9.77□□□□□ -0.85
PRDM1-202ENST00000369091 RYR2Q92736 4967 aa9.69□□□□□ -0.86
PRDM1-202ENST00000369091 KRTAP3-2Q9BYR7 98 aa9.68□□□□□ -0.86
PRDM1-202ENST00000369091 KRTAP3-3Q9BYR6 98 aa9.68□□□□□ -0.86
PRDM1-202ENST00000369091 RPS29P62273 56 aaKnown RBP9.66□□□□□ -0.86
PRDM1-202ENST00000369091 S4R3F8 94 aa9.63□□□□□ -0.87
PRDM1-202ENST00000369091 KRTAP12-2P59991 146 aa9.62□□□□□ -0.87
PRDM1-202ENST00000369091 EPPK1P58107 5090 aaKnown RBP9.49□□□□□ -0.89
PRDM1-202ENST00000369091 PKHD1L1Q86WI1 4243 aa9.48□□□□□ -0.89
PRDM1-202ENST00000369091 SMR3BP02814 79 aaPredicted RBP9.48□□□□□ -0.89
PRDM1-202ENST00000369091 PKHD1P08F94 4074 aa9.48□□□□□ -0.89
PRDM1-202ENST00000369091 A0A0A0MQY5 61 aa9.45□□□□□ -0.9
PRDM1-202ENST00000369091 KRTAP12-1P59990 96 aa9.44□□□□□ -0.9
PRDM1-202ENST00000369091 KRTAP10-8P60410 259 aa9.43□□□□□ -0.9
PRDM1-202ENST00000369091 XP32Q5T750 250 aa9.4□□□□□ -0.9
PRDM1-202ENST00000369091 FAT1Q14517 4588 aa9.35□□□□□ -0.91
PRDM1-202ENST00000369091 APOBP04114 4563 aaKnown RBP9.31□□□□□ -0.92
PRDM1-202ENST00000369091 DYNC1H1Q14204 4646 aaKnown RBP9.28□□□□□ -0.92
PRDM1-202ENST00000369091 HSPG2P98160 4391 aa9.26□□□□□ -0.93
PRDM1-202ENST00000369091 LRP1Q07954 4544 aaKnown RBP9.22□□□□□ -0.93
PRDM1-202ENST00000369091 KIAA1109Q2LD37 5005 aa9.2□□□□□ -0.94
PRDM1-202ENST00000369091 FAT3Q8TDW7 4589 aa9.19□□□□□ -0.94
PRDM1-202ENST00000369091 KRTAP10-4P60372 401 aaPredicted RBP9.18□□□□□ -0.94
PRDM1-202ENST00000369091 LUZP6Q538Z0 58 aa9.18□□□□□ -0.94
PRDM1-202ENST00000369091 MYCBP2O75592 4640 aa9.1□□□□□ -0.95
PRDM1-202ENST00000369091 PLAC4Q8WY50 150 aa9.1□□□□□ -0.95
PRDM1-202ENST00000369091 BIRC6Q9NR09 4857 aa9.08□□□□□ -0.96
PRDM1-202ENST00000369091 A0A1B0GVY2 172 aa9.06□□□□□ -0.96
PRDM1-202ENST00000369091 M0QZ58 72 aa9.06□□□□□ -0.96
PRDM1-202ENST00000369091 TNXBP22105 4242 aa9.06□□□□□ -0.96
PRDM1-202ENST00000369091 RYR1P21817 5038 aa8.99□□□□□ -0.97
PRDM1-202ENST00000369091 LPAP08519 4548 aa8.96□□□□□ -0.98
PRDM1-202ENST00000369091 KRTAP17-1Q9BYP8 105 aa8.9□□□□□ -0.98
PRDM1-202ENST00000369091 HERC2O95714 4834 aa8.87□□□□□ -0.99
PRDM1-202ENST00000369091 ABCA13Q86UQ4 5058 aa8.86□□□□□ -0.99
PRDM1-202ENST00000369091 PCLOQ9Y6V0 5065 aa8.86□□□□□ -0.99
PRDM1-202ENST00000369091 R4GN34 69 aa8.82□□□□□ -1
PRDM1-202ENST00000369091 KRTAP4-5Q9BYR2 181 aa8.76□□□□□ -1.01
PRDM1-202ENST00000369091 LORP23490 312 aaPredicted RBP8.73□□□□□ -1.01
PRDM1-202ENST00000369091 LRP2P98164 4655 aa8.68□□□□□ -1.02
PRDM1-202ENST00000369091 Q5VSD8 79 aa8.62□□□□□ -1.03
PRDM1-202ENST00000369091 HERC1Q15751 4861 aa8.56□□□□□ -1.04
PRDM1-202ENST00000369091 PP632Q6XCG6 107 aa8.55□□□□□ -1.04
PRDM1-202ENST00000369091 CAMK2N1Q7Z7J9 78 aa8.48□□□□□ -1.05
PRDM1-202ENST00000369091 MT1HL1P0DM35 61 aa8.42□□□□□ -1.06
PRDM1-202ENST00000369091 SPRR5A0A1B0GTR4 108 aa8.3□□□□□ -1.08
PRDM1-202ENST00000369091 MUC17Q685J3 4493 aa8.23□□□□□ -1.09
PRDM1-202ENST00000369091 J3QL48 77 aa8.21□□□□□ -1.1
PRDM1-202ENST00000369091 SEC61BP60468 96 aaKnown RBP8.18□□□□□ -1.1
PRDM1-202ENST00000369091 TNP1P09430 55 aa8.17□□□□□ -1.1
PRDM1-202ENST00000369091 KRTAP4-1Q9BYQ7 146 aa8.15□□□□□ -1.1
PRDM1-202ENST00000369091 HMCN2Q8NDA2 5059 aa8.15□□□□□ -1.1
PRDM1-202ENST00000369091 UBR4Q5T4S7 5183 aa8.11□□□□□ -1.11
PRDM1-202ENST00000369091 PRO2289Q9P1D8 64 aa8.02□□□□□ -1.12
PRDM1-202ENST00000369091 KRTAP23-1A1A580 65 aa8.02□□□□□ -1.13
PRDM1-202ENST00000369091 RNF213Q63HN8 5207 aa8□□□□□ -1.13
PRDM1-202ENST00000369091 KRTAP19-2Q3LHN2 52 aa7.99□□□□□ -1.13
PRDM1-202ENST00000369091 MUC2Q02817 5179 aa7.94□□□□□ -1.14
PRDM1-202ENST00000369091 LCE3AQ5TA76 89 aa7.78□□□□□ -1.16
PRDM1-202ENST00000369091 INE1O15225 51 aa7.76□□□□□ -1.17
PRDM1-202ENST00000369091 FLGP20930 4061 aaPredicted RBP7.75□□□□□ -1.17
PRDM1-202ENST00000369091 FAT4Q6V0I7 4981 aa7.59□□□□□ -1.19
PRDM1-202ENST00000369091 KRTAP19-1Q8IUB9 90 aa7.5□□□□□ -1.21
PRDM1-202ENST00000369091 SPRR2GQ9BYE4 73 aa7.48□□□□□ -1.21
PRDM1-202ENST00000369091 KRTAP8-1Q8IUC2 63 aa7.44□□□□□ -1.22
PRDM1-202ENST00000369091 KRTAP10-12P60413 245 aa7.31□□□□□ -1.24
PRDM1-202ENST00000369091 KRTAP12-3P60328 96 aa7.31□□□□□ -1.24
PRDM1-202ENST00000369091 LCE2CQ5TA81 110 aa7.24□□□□□ -1.25
PRDM1-202ENST00000369091 M0R2T5 61 aa7.17□□□□□ -1.26
PRDM1-202ENST00000369091 KRTAP10-5P60370 271 aa7.16□□□□□ -1.26
PRDM1-202ENST00000369091 MT1FP04733 61 aa7.14□□□□□ -1.27
PRDM1-202ENST00000369091 MT1XP80297 61 aa7.14□□□□□ -1.27
PRDM1-202ENST00000369091 KRTAP10-10P60014 251 aa7.13□□□□□ -1.27
PRDM1-202ENST00000369091 MT2AP02795 61 aa7.07□□□□□ -1.28
PRDM1-202ENST00000369091 KRTAP10-7P60409 375 aaPredicted RBP7.06□□□□□ -1.28
PRDM1-202ENST00000369091 MT1BP07438 61 aa7.02□□□□□ -1.29
PRDM1-202ENST00000369091 KRTAP19-8Q3LI54 63 aa7.01□□□□□ -1.29
PRDM1-202ENST00000369091 MT1HP80294 61 aa6.99□□□□□ -1.29
PRDM1-202ENST00000369091 LCE2AQ5TA79 106 aaPredicted RBP6.99□□□□□ -1.29
PRDM1-202ENST00000369091 KRTAP9-8Q9BYQ0 159 aa6.93□□□□□ -1.3
PRDM1-202ENST00000369091 FSIP2Q5CZC0 6907 aa6.93□□□□□ -1.3
PRDM1-202ENST00000369091 LCE3CQ5T5A8 94 aa6.9□□□□□ -1.3
PRDM1-202ENST00000369091 KRTAP19-5Q3LI72 72 aa6.85□□□□□ -1.31
PRDM1-202ENST00000369091 KRTAP9-6A8MVA2 160 aa6.84□□□□□ -1.31
PRDM1-202ENST00000369091 USH2AO75445 5202 aa6.72□□□□□ -1.33
PRDM1-202ENST00000369091 KMT2DO14686 5537 aa6.72□□□□□ -1.33
PRDM1-202ENST00000369091 KRTAP2-3P0C7H8 128 aa6.69□□□□□ -1.34
PRDM1-202ENST00000369091 KRTAP2-4Q9BYR9 128 aa6.69□□□□□ -1.34
PRDM1-202ENST00000369091 KRTAP2-1Q9BYU5 128 aa6.69□□□□□ -1.34
PRDM1-202ENST00000369091 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
PRDM1-202ENST00000369091 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
PRDM1-202ENST00000369091 KRTAP9-2Q9BYQ4 174 aa6.58□□□□□ -1.36
PRDM1-202ENST00000369091 KRTAP4-8A0A0G2JLE6 195 aa6.53□□□□□ -1.36
PRDM1-202ENST00000369091 KRTAP4-8Q9BYQ9 185 aa6.53□□□□□ -1.36
PRDM1-202ENST00000369091 SSPOA2VEC9 5147 aa6.46□□□□□ -1.38
PRDM1-202ENST00000369091 LCE2DQ5TA82 110 aaPredicted RBP6.39□□□□□ -1.39
PRDM1-202ENST00000369091 LCE2BO14633 110 aa6.38□□□□□ -1.39
PRDM1-202ENST00000369091 KRTAP19-7Q3SYF9 63 aa6.34□□□□□ -1.39
PRDM1-202ENST00000369091 CRCT1Q9UGL9 99 aa6.23□□□□□ -1.41
PRDM1-202ENST00000369091 FCGBPQ9Y6R7 5405 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms