RNA–Protein interactions for RNA: ENST00000368259.6

CCT3-204, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2 BASIC

Gene CCT3, Length 1,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-204ENST00000368259 KRTAP10-1P60331 282 aa6.83□□□□□ -1.32
CCT3-204ENST00000368259 A0A1B0GVY2 172 aa6.82□□□□□ -1.32
CCT3-204ENST00000368259 FAT2Q9NYQ8 4349 aa6.81□□□□□ -1.32
CCT3-204ENST00000368259 DNAH5Q8TE73 4624 aa6.81□□□□□ -1.32
CCT3-204ENST00000368259 KRTAP4-5Q9BYR2 181 aa6.8□□□□□ -1.32
CCT3-204ENST00000368259 PKD1P98161 4303 aa6.79□□□□□ -1.32
CCT3-204ENST00000368259 KRTAP3-2Q9BYR7 98 aa6.78□□□□□ -1.32
CCT3-204ENST00000368259 KRTAP13-4Q3LI77 160 aa6.78□□□□□ -1.32
CCT3-204ENST00000368259 KRTAP3-3Q9BYR6 98 aa6.76□□□□□ -1.33
CCT3-204ENST00000368259 S4R3F8 94 aa6.76□□□□□ -1.33
CCT3-204ENST00000368259 C9orf92A6NGG3 77 aa6.75□□□□□ -1.33
CCT3-204ENST00000368259 PKHD1P08F94 4074 aa6.74□□□□□ -1.33
CCT3-204ENST00000368259 FLG2Q5D862 2391 aaPredicted RBP6.72□□□□□ -1.33
CCT3-204ENST00000368259 XP32Q5T750 250 aa6.72□□□□□ -1.33
CCT3-204ENST00000368259 HSPG2P98160 4391 aa6.7□□□□□ -1.34
CCT3-204ENST00000368259 A0A0D9SG42 100 aa6.69□□□□□ -1.34
CCT3-204ENST00000368259 C10orf95Q9H7T3 257 aa6.69□□□□□ -1.34
CCT3-204ENST00000368259 LRP1BQ9NZR2 4599 aa6.68□□□□□ -1.34
CCT3-204ENST00000368259 HERC1Q15751 4861 aa6.64□□□□□ -1.35
CCT3-204ENST00000368259 M0QZ58 72 aa6.64□□□□□ -1.35
CCT3-204ENST00000368259 KRTAP12-1P59990 96 aa6.63□□□□□ -1.35
CCT3-204ENST00000368259 KRTAP12-2P59991 146 aa6.62□□□□□ -1.35
CCT3-204ENST00000368259 DMBT1Q9UGM3 2413 aaPredicted RBP6.62□□□□□ -1.35
CCT3-204ENST00000368259 PKHD1L1Q86WI1 4243 aa6.6□□□□□ -1.35
CCT3-204ENST00000368259 VPS13BQ7Z7G8 4022 aa6.59□□□□□ -1.36
CCT3-204ENST00000368259 APOBP04114 4563 aaKnown RBP6.55□□□□□ -1.36
CCT3-204ENST00000368259 A0A0A0MQY5 61 aa6.55□□□□□ -1.36
CCT3-204ENST00000368259 KRTAP10-4P60372 401 aaPredicted RBP6.48□□□□□ -1.37
CCT3-204ENST00000368259 LUZP6Q538Z0 58 aa6.47□□□□□ -1.37
CCT3-204ENST00000368259 J3QL48 77 aa6.43□□□□□ -1.38
CCT3-204ENST00000368259 Q5VSD8 79 aa6.43□□□□□ -1.38
CCT3-204ENST00000368259 MYCBP2O75592 4640 aa6.43□□□□□ -1.38
CCT3-204ENST00000368259 UBR4Q5T4S7 5183 aa6.42□□□□□ -1.38
CCT3-204ENST00000368259 SMR3BP02814 79 aaPredicted RBP6.42□□□□□ -1.38
CCT3-204ENST00000368259 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
CCT3-204ENST00000368259 KRTAP10-8P60410 259 aa6.39□□□□□ -1.39
CCT3-204ENST00000368259 FAT1Q14517 4588 aa6.37□□□□□ -1.39
CCT3-204ENST00000368259 PP632Q6XCG6 107 aa6.37□□□□□ -1.39
CCT3-204ENST00000368259 HMCN2Q8NDA2 5059 aa6.31□□□□□ -1.4
CCT3-204ENST00000368259 LRP1Q07954 4544 aaKnown RBP6.28□□□□□ -1.4
CCT3-204ENST00000368259 TNXBP22105 4242 aa6.27□□□□□ -1.41
CCT3-204ENST00000368259 FAT3Q8TDW7 4589 aa6.23□□□□□ -1.41
CCT3-204ENST00000368259 R4GN34 69 aa6.2□□□□□ -1.42
CCT3-204ENST00000368259 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
CCT3-204ENST00000368259 SEC61BP60468 96 aaKnown RBP6.08□□□□□ -1.44
CCT3-204ENST00000368259 RNF213Q63HN8 5207 aa6.08□□□□□ -1.44
CCT3-204ENST00000368259 SPRR5A0A1B0GTR4 108 aa6.06□□□□□ -1.44
CCT3-204ENST00000368259 MT1HL1P0DM35 61 aa6.04□□□□□ -1.44
CCT3-204ENST00000368259 LRP2P98164 4655 aa5.99□□□□□ -1.45
CCT3-204ENST00000368259 KRTAP9-2Q9BYQ4 174 aa5.97□□□□□ -1.45
CCT3-204ENST00000368259 CAMK2N1Q7Z7J9 78 aa5.97□□□□□ -1.45
CCT3-204ENST00000368259 KRTAP9-6A0A140TA67 174 aa5.95□□□□□ -1.46
CCT3-204ENST00000368259 TNP1P09430 55 aa5.86□□□□□ -1.47
CCT3-204ENST00000368259 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
CCT3-204ENST00000368259 LORP23490 312 aaPredicted RBP5.84□□□□□ -1.47
CCT3-204ENST00000368259 INE1O15225 51 aa5.79□□□□□ -1.48
CCT3-204ENST00000368259 FAT4Q6V0I7 4981 aa5.78□□□□□ -1.48
CCT3-204ENST00000368259 LPAP08519 4548 aa5.7□□□□□ -1.5
CCT3-204ENST00000368259 LCE2AQ5TA79 106 aaPredicted RBP5.69□□□□□ -1.5
CCT3-204ENST00000368259 KRTAP19-2Q3LHN2 52 aa5.62□□□□□ -1.51
CCT3-204ENST00000368259 LCE2DQ5TA82 110 aaPredicted RBP5.6□□□□□ -1.51
CCT3-204ENST00000368259 MUC17Q685J3 4493 aa5.59□□□□□ -1.52
CCT3-204ENST00000368259 CRCT1Q9UGL9 99 aa5.58□□□□□ -1.52
CCT3-204ENST00000368259 MUC2Q02817 5179 aa5.55□□□□□ -1.52
CCT3-204ENST00000368259 KRTAP4-1Q9BYQ7 146 aa5.49□□□□□ -1.53
CCT3-204ENST00000368259 FLGP20930 4061 aaPredicted RBP5.49□□□□□ -1.53
CCT3-204ENST00000368259 SPRR2GQ9BYE4 73 aa5.42□□□□□ -1.54
CCT3-204ENST00000368259 KRTAP8-1Q8IUC2 63 aa5.41□□□□□ -1.54
CCT3-204ENST00000368259 FSIP2Q5CZC0 6907 aa5.4□□□□□ -1.54
CCT3-204ENST00000368259 LCE3AQ5TA76 89 aa5.35□□□□□ -1.55
CCT3-204ENST00000368259 KRTAP9-7A8MTY7 169 aa5.29□□□□□ -1.56
CCT3-204ENST00000368259 KRTAP19-1Q8IUB9 90 aa5.23□□□□□ -1.57
CCT3-204ENST00000368259 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.21□□□□□ -1.58
CCT3-204ENST00000368259 LCE2CQ5TA81 110 aa5.19□□□□□ -1.58
CCT3-204ENST00000368259 KRTAP12-3P60328 96 aa5.15□□□□□ -1.59
CCT3-204ENST00000368259 KRTAP10-12P60413 245 aa5.15□□□□□ -1.59
CCT3-204ENST00000368259 MT1HP80294 61 aa5.13□□□□□ -1.59
CCT3-204ENST00000368259 KRTAP19-8Q3LI54 63 aa5.12□□□□□ -1.59
CCT3-204ENST00000368259 KRTAP10-5P60370 271 aa5.04□□□□□ -1.6
CCT3-204ENST00000368259 M0R2T5 61 aa5.02□□□□□ -1.61
CCT3-204ENST00000368259 KRTAP10-10P60014 251 aa5.02□□□□□ -1.61
CCT3-204ENST00000368259 MT1XP80297 61 aa4.97□□□□□ -1.61
CCT3-204ENST00000368259 SSPOA2VEC9 5147 aa4.93□□□□□ -1.62
CCT3-204ENST00000368259 MT2AP02795 61 aa4.92□□□□□ -1.62
CCT3-204ENST00000368259 KRTAP19-4Q3LI73 84 aa4.9□□□□□ -1.62
CCT3-204ENST00000368259 FCGBPQ9Y6R7 5405 aaPredicted RBP4.9□□□□□ -1.63
CCT3-204ENST00000368259 MT1FP04733 61 aa4.9□□□□□ -1.63
CCT3-204ENST00000368259 MT1BP07438 61 aa4.9□□□□□ -1.63
CCT3-204ENST00000368259 LCE3CQ5T5A8 94 aa4.9□□□□□ -1.63
CCT3-204ENST00000368259 USH2AO75445 5202 aa4.89□□□□□ -1.63
CCT3-204ENST00000368259 KRTAP9-8Q9BYQ0 159 aa4.89□□□□□ -1.63
CCT3-204ENST00000368259 MACF1Q9UPN3 7388 aaKnown RBP4.84□□□□□ -1.63
CCT3-204ENST00000368259 KRTAP2-3P0C7H8 128 aa4.83□□□□□ -1.64
CCT3-204ENST00000368259 KRTAP2-4Q9BYR9 128 aa4.83□□□□□ -1.64
CCT3-204ENST00000368259 KRTAP2-1Q9BYU5 128 aa4.83□□□□□ -1.64
CCT3-204ENST00000368259 SYNE2Q8WXH0 6885 aaKnown RBP4.83□□□□□ -1.64
CCT3-204ENST00000368259 KRTAP10-7P60409 375 aaPredicted RBP4.79□□□□□ -1.64
CCT3-204ENST00000368259 KRTAP6-3Q3LI67 103 aa4.76□□□□□ -1.65
CCT3-204ENST00000368259 LCE2BO14633 110 aa4.71□□□□□ -1.66
CCT3-204ENST00000368259 KRTAP9-3Q9BYQ3 159 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms