RNA–Protein interactions for RNA: ENST00000367718.5

TNFSF4-202, Transcript of TNF superfamily member 4, humanhuman

TSL 1 (best) BASIC

Gene TNFSF4, Length 3,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-202ENST00000367718 CRIPTQ9P021 101 aa3.08□□□□□ -1.92
TNFSF4-202ENST00000367718 HSPG2P98160 4391 aa3.08□□□□□ -1.92
TNFSF4-202ENST00000367718 KRTAP9-2Q9BYQ4 174 aa3.08□□□□□ -1.92
TNFSF4-202ENST00000367718 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.07□□□□□ -1.92
TNFSF4-202ENST00000367718 LINC01554Q52M75 96 aa3.06□□□□□ -1.92
TNFSF4-202ENST00000367718 ABCA13Q86UQ4 5058 aa3.06□□□□□ -1.92
TNFSF4-202ENST00000367718 KRTAP23-1A1A580 65 aa3.06□□□□□ -1.92
TNFSF4-202ENST00000367718 ATP11AUNQ6ZP68 121 aa3.06□□□□□ -1.92
TNFSF4-202ENST00000367718 Q5VSD8 79 aa3.06□□□□□ -1.92
TNFSF4-202ENST00000367718 KRTAP9-6A0A140TA67 174 aa3.05□□□□□ -1.92
TNFSF4-202ENST00000367718 Q75L30 129 aa3.05□□□□□ -1.92
TNFSF4-202ENST00000367718 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
TNFSF4-202ENST00000367718 LRP2P98164 4655 aa3.05□□□□□ -1.92
TNFSF4-202ENST00000367718 PKHD1L1Q86WI1 4243 aa3.05□□□□□ -1.92
TNFSF4-202ENST00000367718 DMAC1Q96GE9 116 aa3.05□□□□□ -1.92
TNFSF4-202ENST00000367718 SPATA8Q6RVD6 105 aa3.05□□□□□ -1.92
TNFSF4-202ENST00000367718 MUC2Q02817 5179 aa3.04□□□□□ -1.92
TNFSF4-202ENST00000367718 A0A0D9SG42 100 aa3.03□□□□□ -1.92
TNFSF4-202ENST00000367718 A0A1B0GVY2 172 aa3.02□□□□□ -1.93
TNFSF4-202ENST00000367718 CDC42SE1Q9NRR8 79 aa3.02□□□□□ -1.93
TNFSF4-202ENST00000367718 KRTAP9-7A8MTY7 169 aa3.01□□□□□ -1.93
TNFSF4-202ENST00000367718 KRTAP10-4P60372 401 aaPredicted RBP3.01□□□□□ -1.93
TNFSF4-202ENST00000367718 MIR22HGQ0VDD5 57 aa3.01□□□□□ -1.93
TNFSF4-202ENST00000367718 LCE3BQ5TA77 95 aa3□□□□□ -1.93
TNFSF4-202ENST00000367718 KRTAP10-8P60410 259 aa3□□□□□ -1.93
TNFSF4-202ENST00000367718 KRTAP4-5Q9BYR2 181 aa3□□□□□ -1.93
TNFSF4-202ENST00000367718 KRTAP4-8A0A0G2JLE6 195 aa2.97□□□□□ -1.93
TNFSF4-202ENST00000367718 UQCR11O14957 56 aa2.97□□□□□ -1.93
TNFSF4-202ENST00000367718 KRTAP19-4Q3LI73 84 aa2.94□□□□□ -1.94
TNFSF4-202ENST00000367718 H0YAA0 97 aa2.94□□□□□ -1.94
TNFSF4-202ENST00000367718 TNXBP22105 4242 aa2.94□□□□□ -1.94
TNFSF4-202ENST00000367718 CSAG1Q6PB30 78 aa2.93□□□□□ -1.94
TNFSF4-202ENST00000367718 A8MUU9 505 aa2.93□□□□□ -1.94
TNFSF4-202ENST00000367718 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
TNFSF4-202ENST00000367718 KRTAP9-4Q9BYQ2 154 aa2.93□□□□□ -1.94
TNFSF4-202ENST00000367718 C20orf166-AS1Q96NR2 134 aa2.93□□□□□ -1.94
TNFSF4-202ENST00000367718 A0A1B0GU33 70 aa2.92□□□□□ -1.94
TNFSF4-202ENST00000367718 RNF213Q63HN8 5207 aa2.92□□□□□ -1.94
TNFSF4-202ENST00000367718 P0C880 135 aa2.91□□□□□ -1.94
TNFSF4-202ENST00000367718 KRTAP4-7Q9BYR0 210 aa2.91□□□□□ -1.94
TNFSF4-202ENST00000367718 HERC1Q15751 4861 aa2.91□□□□□ -1.94
TNFSF4-202ENST00000367718 HERC2O95714 4834 aa2.9□□□□□ -1.94
TNFSF4-202ENST00000367718 COX6B2Q6YFQ2 88 aa2.89□□□□□ -1.95
TNFSF4-202ENST00000367718 KRTAP13-4Q3LI77 160 aa2.88□□□□□ -1.95
TNFSF4-202ENST00000367718 ROMO1P60602 79 aa2.88□□□□□ -1.95
TNFSF4-202ENST00000367718 SPINT4Q6UDR6 99 aa2.88□□□□□ -1.95
TNFSF4-202ENST00000367718 FAT4Q6V0I7 4981 aa2.88□□□□□ -1.95
TNFSF4-202ENST00000367718 MT1HL1P0DM35 61 aa2.87□□□□□ -1.95
TNFSF4-202ENST00000367718 LCE1DQ5T752 114 aa2.87□□□□□ -1.95
TNFSF4-202ENST00000367718 H1FX-AS1Q4G0G2 97 aa2.87□□□□□ -1.95
TNFSF4-202ENST00000367718 KRTAP21-3Q3LHN1 58 aa2.86□□□□□ -1.95
TNFSF4-202ENST00000367718 RPL37P61927 97 aaKnown RBP2.86□□□□□ -1.95
TNFSF4-202ENST00000367718 KRTAP15-1Q3LI76 137 aa2.86□□□□□ -1.95
TNFSF4-202ENST00000367718 KRTAP4-9Q9BYQ8 210 aa2.86□□□□□ -1.95
TNFSF4-202ENST00000367718 C10orf95Q9H7T3 257 aa2.86□□□□□ -1.95
TNFSF4-202ENST00000367718 S4R3F8 94 aa2.86□□□□□ -1.95
TNFSF4-202ENST00000367718 RPS29P62273 56 aaKnown RBP2.84□□□□□ -1.96
TNFSF4-202ENST00000367718 PCLOQ9Y6V0 5065 aa2.84□□□□□ -1.96
TNFSF4-202ENST00000367718 KRTAP10-6P60371 365 aaPredicted RBP2.81□□□□□ -1.96
TNFSF4-202ENST00000367718 KRTAP9-3Q9BYQ3 159 aa2.8□□□□□ -1.96
TNFSF4-202ENST00000367718 UBR4Q5T4S7 5183 aa2.8□□□□□ -1.96
TNFSF4-202ENST00000367718 K7ERS5 55 aa2.78□□□□□ -1.96
TNFSF4-202ENST00000367718 KRTAP4-1Q9BYQ7 146 aa2.78□□□□□ -1.96
TNFSF4-202ENST00000367718 KRTAP12-2P59991 146 aa2.77□□□□□ -1.97
TNFSF4-202ENST00000367718 M0QZ58 72 aa2.75□□□□□ -1.97
TNFSF4-202ENST00000367718 KRTAP25-1Q3LHN0 102 aa2.73□□□□□ -1.97
TNFSF4-202ENST00000367718 HMCN2Q8NDA2 5059 aa2.73□□□□□ -1.97
TNFSF4-202ENST00000367718 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
TNFSF4-202ENST00000367718 TPRXLQ17RH7 258 aa2.72□□□□□ -1.97
TNFSF4-202ENST00000367718 R4GN34 69 aa2.72□□□□□ -1.97
TNFSF4-202ENST00000367718 NDUFAF8A1L188 74 aa2.71□□□□□ -1.98
TNFSF4-202ENST00000367718 LCE5AQ5TCM9 118 aa2.71□□□□□ -1.98
TNFSF4-202ENST00000367718 KRTAP12-1P59990 96 aa2.68□□□□□ -1.98
TNFSF4-202ENST00000367718 SEC61BP60468 96 aaKnown RBP2.68□□□□□ -1.98
TNFSF4-202ENST00000367718 KRTAP4-11Q9BYQ6 195 aa2.68□□□□□ -1.98
TNFSF4-202ENST00000367718 BIRC6Q9NR09 4857 aa2.67□□□□□ -1.98
TNFSF4-202ENST00000367718 M0R2T5 61 aa2.65□□□□□ -1.98
TNFSF4-202ENST00000367718 LUZP6Q538Z0 58 aa2.65□□□□□ -1.98
TNFSF4-202ENST00000367718 MUC17Q685J3 4493 aa2.65□□□□□ -1.98
TNFSF4-202ENST00000367718 FSIP2Q5CZC0 6907 aa2.64□□□□□ -1.99
TNFSF4-202ENST00000367718 CAMK2N1Q7Z7J9 78 aa2.63□□□□□ -1.99
TNFSF4-202ENST00000367718 USH2AO75445 5202 aa2.61□□□□□ -1.99
TNFSF4-202ENST00000367718 KRTAP19-2Q3LHN2 52 aa2.52□□□□□ -2.01
TNFSF4-202ENST00000367718 FLGP20930 4061 aaPredicted RBP2.52□□□□□ -2.01
TNFSF4-202ENST00000367718 KMT2DO14686 5537 aa2.52□□□□□ -2.01
TNFSF4-202ENST00000367718 KRTAP10-10P60014 251 aa2.5□□□□□ -2.01
TNFSF4-202ENST00000367718 KRTAP5-3Q6L8H2 238 aa2.45□□□□□ -2.02
TNFSF4-202ENST00000367718 PLAC4Q8WY50 150 aa2.43□□□□□ -2.02
TNFSF4-202ENST00000367718 MT1FP04733 61 aa2.43□□□□□ -2.02
TNFSF4-202ENST00000367718 MT1HP80294 61 aa2.42□□□□□ -2.02
TNFSF4-202ENST00000367718 TNP1P09430 55 aa2.39□□□□□ -2.03
TNFSF4-202ENST00000367718 MT2AP02795 61 aa2.39□□□□□ -2.03
TNFSF4-202ENST00000367718 LCE3AQ5TA76 89 aa2.35□□□□□ -2.03
TNFSF4-202ENST00000367718 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.03
TNFSF4-202ENST00000367718 DSTQ03001 7570 aaKnown RBP2.34□□□□□ -2.03
TNFSF4-202ENST00000367718 KRTAP9-8Q9BYQ0 159 aa2.33□□□□□ -2.04
TNFSF4-202ENST00000367718 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
TNFSF4-202ENST00000367718 LCE1AQ5T7P2 110 aa2.3□□□□□ -2.04
TNFSF4-202ENST00000367718 HMCN1Q96RW7 5635 aa2.3□□□□□ -2.04
TNFSF4-202ENST00000367718 KRTAP10-7P60409 375 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms