RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 INE1O15225 51 aa5.32□□□□□ -1.56
CDC42BPA-202ENST00000366764 ANK2Q01484 3957 aa5.29□□□□□ -1.56
CDC42BPA-202ENST00000366764 CMYA5Q8N3K9 4069 aa5.28□□□□□ -1.56
CDC42BPA-202ENST00000366764 DNAH7Q8WXX0 4024 aa5.27□□□□□ -1.57
CDC42BPA-202ENST00000366764 DNAH1Q9P2D7 4330 aa5.24□□□□□ -1.57
CDC42BPA-202ENST00000366764 DNAH2Q9P225 4427 aa5.23□□□□□ -1.57
CDC42BPA-202ENST00000366764 DNAH10Q8IVF4 4471 aa5.2□□□□□ -1.58
CDC42BPA-202ENST00000366764 DNAH9Q9NYC9 4486 aa5.15□□□□□ -1.58
CDC42BPA-202ENST00000366764 VPS13BQ7Z7G8 4022 aa5.15□□□□□ -1.59
CDC42BPA-202ENST00000366764 KMT2AQ03164 3969 aa5.15□□□□□ -1.59
CDC42BPA-202ENST00000366764 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
CDC42BPA-202ENST00000366764 PRKDCP78527 4128 aaKnown RBP5.11□□□□□ -1.59
CDC42BPA-202ENST00000366764 DNAH6Q9C0G6 4158 aa5.09□□□□□ -1.59
CDC42BPA-202ENST00000366764 VPS13DQ5THJ4 4388 aa5.08□□□□□ -1.6
CDC42BPA-202ENST00000366764 KRTAP12-3P60328 96 aa5.03□□□□□ -1.6
CDC42BPA-202ENST00000366764 PLECQ15149 4684 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-202ENST00000366764 DNAH11Q96DT5 4516 aa4.98□□□□□ -1.61
CDC42BPA-202ENST00000366764 DYNC2H1Q8NCM8 4307 aaKnown RBP4.98□□□□□ -1.61
CDC42BPA-202ENST00000366764 DNAH5Q8TE73 4624 aa4.97□□□□□ -1.61
CDC42BPA-202ENST00000366764 STARD9Q9P2P6 4700 aa4.97□□□□□ -1.61
CDC42BPA-202ENST00000366764 DNAH17Q9UFH2 4485 aa4.96□□□□□ -1.62
CDC42BPA-202ENST00000366764 LORP23490 312 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-202ENST00000366764 KRTAP4-5Q9BYR2 181 aa4.93□□□□□ -1.62
CDC42BPA-202ENST00000366764 LCE3AQ5TA76 89 aa4.91□□□□□ -1.62
CDC42BPA-202ENST00000366764 FAT2Q9NYQ8 4349 aa4.88□□□□□ -1.63
CDC42BPA-202ENST00000366764 FRAS1Q86XX4 4008 aa4.87□□□□□ -1.63
CDC42BPA-202ENST00000366764 SPRR2GQ9BYE4 73 aa4.86□□□□□ -1.63
CDC42BPA-202ENST00000366764 DNAH8Q96JB1 4490 aa4.81□□□□□ -1.64
CDC42BPA-202ENST00000366764 KRTAP4-1Q9BYQ7 146 aa4.76□□□□□ -1.65
CDC42BPA-202ENST00000366764 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
CDC42BPA-202ENST00000366764 LRP1BQ9NZR2 4599 aa4.7□□□□□ -1.66
CDC42BPA-202ENST00000366764 FLGP20930 4061 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-202ENST00000366764 KRTAP8-1Q8IUC2 63 aa4.69□□□□□ -1.66
CDC42BPA-202ENST00000366764 RYR1P21817 5038 aa4.68□□□□□ -1.66
CDC42BPA-202ENST00000366764 DNHD1Q96M86 4753 aa4.68□□□□□ -1.66
CDC42BPA-202ENST00000366764 MT2AP02795 61 aa4.62□□□□□ -1.67
CDC42BPA-202ENST00000366764 MT1HP80294 61 aa4.62□□□□□ -1.67
CDC42BPA-202ENST00000366764 DYNC1H1Q14204 4646 aaKnown RBP4.61□□□□□ -1.67
CDC42BPA-202ENST00000366764 PKHD1P08F94 4074 aa4.6□□□□□ -1.67
CDC42BPA-202ENST00000366764 SACSQ9NZJ4 4579 aa4.59□□□□□ -1.67
CDC42BPA-202ENST00000366764 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
CDC42BPA-202ENST00000366764 MT1FP04733 61 aa4.52□□□□□ -1.69
CDC42BPA-202ENST00000366764 KRTAP19-8Q3LI54 63 aa4.51□□□□□ -1.69
CDC42BPA-202ENST00000366764 MYCBP2O75592 4640 aa4.51□□□□□ -1.69
CDC42BPA-202ENST00000366764 APOBP04114 4563 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-202ENST00000366764 FAT1Q14517 4588 aa4.5□□□□□ -1.69
CDC42BPA-202ENST00000366764 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
CDC42BPA-202ENST00000366764 KRTAP19-1Q8IUB9 90 aa4.48□□□□□ -1.69
CDC42BPA-202ENST00000366764 LRP1Q07954 4544 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-202ENST00000366764 PKD1P98161 4303 aa4.43□□□□□ -1.7
CDC42BPA-202ENST00000366764 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
CDC42BPA-202ENST00000366764 CRCT1Q9UGL9 99 aa4.42□□□□□ -1.7
CDC42BPA-202ENST00000366764 KRTAP10-5P60370 271 aa4.37□□□□□ -1.71
CDC42BPA-202ENST00000366764 RYR3Q15413 4870 aa4.36□□□□□ -1.71
CDC42BPA-202ENST00000366764 PKHD1L1Q86WI1 4243 aa4.35□□□□□ -1.71
CDC42BPA-202ENST00000366764 MT1XP80297 61 aa4.33□□□□□ -1.72
CDC42BPA-202ENST00000366764 KRTAP17-1Q9BYP8 105 aa4.29□□□□□ -1.72
CDC42BPA-202ENST00000366764 TNXBP22105 4242 aa4.27□□□□□ -1.73
CDC42BPA-202ENST00000366764 RYR2Q92736 4967 aa4.27□□□□□ -1.73
CDC42BPA-202ENST00000366764 KRTAP10-7P60409 375 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-202ENST00000366764 KIAA1109Q2LD37 5005 aa4.26□□□□□ -1.73
CDC42BPA-202ENST00000366764 FAT3Q8TDW7 4589 aa4.25□□□□□ -1.73
CDC42BPA-202ENST00000366764 LRP2P98164 4655 aa4.23□□□□□ -1.73
CDC42BPA-202ENST00000366764 MT1BP07438 61 aa4.22□□□□□ -1.73
CDC42BPA-202ENST00000366764 KRTAP9-8Q9BYQ0 159 aa4.22□□□□□ -1.73
CDC42BPA-202ENST00000366764 LCE2CQ5TA81 110 aa4.2□□□□□ -1.74
CDC42BPA-202ENST00000366764 HSPG2P98160 4391 aa4.17□□□□□ -1.74
CDC42BPA-202ENST00000366764 KRTAP19-2Q3LHN2 52 aa4.17□□□□□ -1.74
CDC42BPA-202ENST00000366764 KRTAP9-3Q9BYQ3 159 aa4.12□□□□□ -1.75
CDC42BPA-202ENST00000366764 PCLOQ9Y6V0 5065 aa4.12□□□□□ -1.75
CDC42BPA-202ENST00000366764 SPRR2FQ96RM1 72 aa4.08□□□□□ -1.76
CDC42BPA-202ENST00000366764 HYDINQ4G0P3 5121 aa4.05□□□□□ -1.76
CDC42BPA-202ENST00000366764 MUC17Q685J3 4493 aa4.04□□□□□ -1.76
CDC42BPA-202ENST00000366764 MT1GP13640 62 aa4□□□□□ -1.77
CDC42BPA-202ENST00000366764 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
CDC42BPA-202ENST00000366764 KMT2CQ8NEZ4 4911 aaKnown RBP3.96□□□□□ -1.77
CDC42BPA-202ENST00000366764 MT1LQ93083 61 aa3.95□□□□□ -1.78
CDC42BPA-202ENST00000366764 HERC2O95714 4834 aa3.94□□□□□ -1.78
CDC42BPA-202ENST00000366764 MT1EP04732 61 aa3.88□□□□□ -1.79
CDC42BPA-202ENST00000366764 KRTAP4-8A0A0G2JLE6 195 aa3.87□□□□□ -1.79
CDC42BPA-202ENST00000366764 LCE3BQ5TA77 95 aa3.87□□□□□ -1.79
CDC42BPA-202ENST00000366764 KRTAP4-8Q9BYQ9 185 aa3.87□□□□□ -1.79
CDC42BPA-202ENST00000366764 KRTAP19-3Q7Z4W3 81 aa3.85□□□□□ -1.79
CDC42BPA-202ENST00000366764 LCE2BO14633 110 aa3.83□□□□□ -1.8
CDC42BPA-202ENST00000366764 LCE3DQ9BYE3 92 aa3.8□□□□□ -1.8
CDC42BPA-202ENST00000366764 LPAP08519 4548 aa3.8□□□□□ -1.8
CDC42BPA-202ENST00000366764 HERC1Q15751 4861 aa3.8□□□□□ -1.8
CDC42BPA-202ENST00000366764 LCE3EQ5T5B0 92 aa3.78□□□□□ -1.8
CDC42BPA-202ENST00000366764 KRTAP2-3P0C7H8 128 aa3.74□□□□□ -1.81
CDC42BPA-202ENST00000366764 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
CDC42BPA-202ENST00000366764 KRTAP2-1Q9BYU5 128 aa3.74□□□□□ -1.81
CDC42BPA-202ENST00000366764 SPRR2EP22531 72 aa3.73□□□□□ -1.81
CDC42BPA-202ENST00000366764 SPRR2BP35325 72 aa3.73□□□□□ -1.81
CDC42BPA-202ENST00000366764 SPRR2AP35326 72 aa3.73□□□□□ -1.81
CDC42BPA-202ENST00000366764 MT1MQ8N339 61 aa3.71□□□□□ -1.82
CDC42BPA-202ENST00000366764 KRTAP19-6Q3LI70 58 aa3.7□□□□□ -1.82
CDC42BPA-202ENST00000366764 KRTAP19-7Q3SYF9 63 aa3.67□□□□□ -1.82
CDC42BPA-202ENST00000366764 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
CDC42BPA-202ENST00000366764 BIRC6Q9NR09 4857 aa3.64□□□□□ -1.83
CDC42BPA-202ENST00000366764 SPRR2DP22532 72 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms