RNA–Protein interactions for RNA: ENST00000366554.2

OPN3-201, Transcript of opsin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene OPN3, Length 2,620 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPN3-201ENST00000366554 PKHD1L1Q86WI1 4243 aa11.15□□□□□ -0.62
OPN3-201ENST00000366554 S4R3F8 94 aa11.14□□□□□ -0.63
OPN3-201ENST00000366554 KRTAP21-3Q3LHN1 58 aa11.11□□□□□ -0.63
OPN3-201ENST00000366554 KRTAP12-2P59991 146 aa11.08□□□□□ -0.64
OPN3-201ENST00000366554 HYDINQ4G0P3 5121 aa11.06□□□□□ -0.64
OPN3-201ENST00000366554 XP32Q5T750 250 aa10.98□□□□□ -0.65
OPN3-201ENST00000366554 PKHD1P08F94 4074 aa10.96□□□□□ -0.65
OPN3-201ENST00000366554 KRTAP12-1P59990 96 aa10.95□□□□□ -0.66
OPN3-201ENST00000366554 APOBP04114 4563 aaKnown RBP10.9□□□□□ -0.66
OPN3-201ENST00000366554 KRTAP10-8P60410 259 aa10.85□□□□□ -0.67
OPN3-201ENST00000366554 FAT1Q14517 4588 aa10.84□□□□□ -0.67
OPN3-201ENST00000366554 SMR3BP02814 79 aaPredicted RBP10.82□□□□□ -0.68
OPN3-201ENST00000366554 DYNC1H1Q14204 4646 aaKnown RBP10.79□□□□□ -0.68
OPN3-201ENST00000366554 A0A0A0MQY5 61 aa10.78□□□□□ -0.68
OPN3-201ENST00000366554 LRP1Q07954 4544 aaKnown RBP10.78□□□□□ -0.68
OPN3-201ENST00000366554 HSPG2P98160 4391 aa10.75□□□□□ -0.69
OPN3-201ENST00000366554 KRTAP10-4P60372 401 aaPredicted RBP10.75□□□□□ -0.69
OPN3-201ENST00000366554 FAT3Q8TDW7 4589 aa10.73□□□□□ -0.69
OPN3-201ENST00000366554 M0QZ58 72 aa10.65□□□□□ -0.7
OPN3-201ENST00000366554 TNXBP22105 4242 aa10.61□□□□□ -0.71
OPN3-201ENST00000366554 LUZP6Q538Z0 58 aa10.55□□□□□ -0.72
OPN3-201ENST00000366554 PLAC4Q8WY50 150 aa10.54□□□□□ -0.72
OPN3-201ENST00000366554 MYCBP2O75592 4640 aa10.48□□□□□ -0.73
OPN3-201ENST00000366554 KMT2CQ8NEZ4 4911 aaKnown RBP10.43□□□□□ -0.74
OPN3-201ENST00000366554 A0A1B0GVY2 172 aa10.31□□□□□ -0.76
OPN3-201ENST00000366554 LPAP08519 4548 aa10.3□□□□□ -0.76
OPN3-201ENST00000366554 RYR3Q15413 4870 aa10.22□□□□□ -0.77
OPN3-201ENST00000366554 R4GN34 69 aa10.21□□□□□ -0.78
OPN3-201ENST00000366554 RYR2Q92736 4967 aa10.17□□□□□ -0.78
OPN3-201ENST00000366554 PP632Q6XCG6 107 aa10.08□□□□□ -0.8
OPN3-201ENST00000366554 LRP2P98164 4655 aa10.05□□□□□ -0.8
OPN3-201ENST00000366554 LORP23490 312 aaPredicted RBP10.01□□□□□ -0.81
OPN3-201ENST00000366554 Q5VSD8 79 aa9.89□□□□□ -0.83
OPN3-201ENST00000366554 EPPK1P58107 5090 aaKnown RBP9.88□□□□□ -0.83
OPN3-201ENST00000366554 MT1HL1P0DM35 61 aa9.82□□□□□ -0.84
OPN3-201ENST00000366554 CAMK2N1Q7Z7J9 78 aa9.77□□□□□ -0.85
OPN3-201ENST00000366554 SPRR5A0A1B0GTR4 108 aa9.76□□□□□ -0.85
OPN3-201ENST00000366554 KRTAP17-1Q9BYP8 105 aa9.66□□□□□ -0.86
OPN3-201ENST00000366554 KIAA1109Q2LD37 5005 aa9.66□□□□□ -0.86
OPN3-201ENST00000366554 RYR1P21817 5038 aa9.65□□□□□ -0.86
OPN3-201ENST00000366554 MUC17Q685J3 4493 aa9.62□□□□□ -0.87
OPN3-201ENST00000366554 KRTAP23-1A1A580 65 aa9.59□□□□□ -0.87
OPN3-201ENST00000366554 SEC61BP60468 96 aaKnown RBP9.55□□□□□ -0.88
OPN3-201ENST00000366554 TNP1P09430 55 aa9.52□□□□□ -0.89
OPN3-201ENST00000366554 ABCA13Q86UQ4 5058 aa9.42□□□□□ -0.9
OPN3-201ENST00000366554 KRTAP4-1Q9BYQ7 146 aa9.39□□□□□ -0.91
OPN3-201ENST00000366554 PRO2289Q9P1D8 64 aa9.37□□□□□ -0.91
OPN3-201ENST00000366554 BIRC6Q9NR09 4857 aa9.37□□□□□ -0.91
OPN3-201ENST00000366554 KRTAP19-2Q3LHN2 52 aa9.37□□□□□ -0.91
OPN3-201ENST00000366554 KRTAP4-5Q9BYR2 181 aa9.31□□□□□ -0.92
OPN3-201ENST00000366554 HERC2O95714 4834 aa9.19□□□□□ -0.94
OPN3-201ENST00000366554 PCLOQ9Y6V0 5065 aa9.18□□□□□ -0.94
OPN3-201ENST00000366554 INE1O15225 51 aa9.13□□□□□ -0.95
OPN3-201ENST00000366554 FLGP20930 4061 aaPredicted RBP9.08□□□□□ -0.96
OPN3-201ENST00000366554 HERC1Q15751 4861 aa9.08□□□□□ -0.96
OPN3-201ENST00000366554 LCE3AQ5TA76 89 aa8.95□□□□□ -0.98
OPN3-201ENST00000366554 MUC2Q02817 5179 aa8.93□□□□□ -0.98
OPN3-201ENST00000366554 SPRR2GQ9BYE4 73 aa8.81□□□□□ -1
OPN3-201ENST00000366554 KRTAP8-1Q8IUC2 63 aa8.76□□□□□ -1.01
OPN3-201ENST00000366554 J3QL48 77 aa8.75□□□□□ -1.01
OPN3-201ENST00000366554 KRTAP19-1Q8IUB9 90 aa8.74□□□□□ -1.01
OPN3-201ENST00000366554 KRTAP10-12P60413 245 aa8.52□□□□□ -1.04
OPN3-201ENST00000366554 HMCN2Q8NDA2 5059 aa8.51□□□□□ -1.05
OPN3-201ENST00000366554 KRTAP12-3P60328 96 aa8.49□□□□□ -1.05
OPN3-201ENST00000366554 FAT4Q6V0I7 4981 aa8.47□□□□□ -1.05
OPN3-201ENST00000366554 LCE2CQ5TA81 110 aa8.46□□□□□ -1.06
OPN3-201ENST00000366554 UBR4Q5T4S7 5183 aa8.44□□□□□ -1.06
OPN3-201ENST00000366554 RNF213Q63HN8 5207 aa8.39□□□□□ -1.07
OPN3-201ENST00000366554 KRTAP10-5P60370 271 aa8.33□□□□□ -1.08
OPN3-201ENST00000366554 MT1XP80297 61 aa8.29□□□□□ -1.08
OPN3-201ENST00000366554 KRTAP19-8Q3LI54 63 aa8.28□□□□□ -1.08
OPN3-201ENST00000366554 MT1FP04733 61 aa8.26□□□□□ -1.09
OPN3-201ENST00000366554 KRTAP10-10P60014 251 aa8.22□□□□□ -1.09
OPN3-201ENST00000366554 MT2AP02795 61 aa8.21□□□□□ -1.09
OPN3-201ENST00000366554 M0R2T5 61 aa8.2□□□□□ -1.1
OPN3-201ENST00000366554 MT1BP07438 61 aa8.17□□□□□ -1.1
OPN3-201ENST00000366554 MT1HP80294 61 aa8.14□□□□□ -1.11
OPN3-201ENST00000366554 KRTAP10-7P60409 375 aaPredicted RBP8.13□□□□□ -1.11
OPN3-201ENST00000366554 KRTAP9-8Q9BYQ0 159 aa8.1□□□□□ -1.11
OPN3-201ENST00000366554 LCE3CQ5T5A8 94 aa8.04□□□□□ -1.12
OPN3-201ENST00000366554 KRTAP19-5Q3LI72 72 aa7.89□□□□□ -1.15
OPN3-201ENST00000366554 KRTAP9-6A8MVA2 160 aa7.88□□□□□ -1.15
OPN3-201ENST00000366554 KRTAP2-3P0C7H8 128 aa7.85□□□□□ -1.15
OPN3-201ENST00000366554 KRTAP2-4Q9BYR9 128 aa7.85□□□□□ -1.15
OPN3-201ENST00000366554 KRTAP2-1Q9BYU5 128 aa7.85□□□□□ -1.15
OPN3-201ENST00000366554 KRTAP9-3Q9BYQ3 159 aa7.71□□□□□ -1.18
OPN3-201ENST00000366554 KMT2DO14686 5537 aa7.58□□□□□ -1.2
OPN3-201ENST00000366554 KRTAP4-7Q9BYR0 210 aa7.48□□□□□ -1.21
OPN3-201ENST00000366554 KRTAP4-8A0A0G2JLE6 195 aa7.47□□□□□ -1.21
OPN3-201ENST00000366554 KRTAP4-8Q9BYQ9 185 aa7.47□□□□□ -1.21
OPN3-201ENST00000366554 KRTAP19-7Q3SYF9 63 aa7.39□□□□□ -1.23
OPN3-201ENST00000366554 LCE2AQ5TA79 106 aaPredicted RBP7.34□□□□□ -1.23
OPN3-201ENST00000366554 KRTAP19-4Q3LI73 84 aa7.33□□□□□ -1.24
OPN3-201ENST00000366554 LCE2BO14633 110 aa7.3□□□□□ -1.24
OPN3-201ENST00000366554 USH2AO75445 5202 aa7.28□□□□□ -1.24
OPN3-201ENST00000366554 MT1LQ93083 61 aa7.21□□□□□ -1.25
OPN3-201ENST00000366554 FSIP2Q5CZC0 6907 aa7.2□□□□□ -1.26
OPN3-201ENST00000366554 MT1EP04732 61 aa7.1□□□□□ -1.27
OPN3-201ENST00000366554 KRTAP12-4P60329 112 aa7.08□□□□□ -1.28
OPN3-201ENST00000366554 LOC100996750A0A140TA64 210 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms