RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 FAT1Q14517 4588 aa6.98□□□□□ -1.29
SGMS1-202ENST00000361781 KRTAP13-4Q3LI77 160 aa6.97□□□□□ -1.29
SGMS1-202ENST00000361781 VPS13BQ7Z7G8 4022 aa6.96□□□□□ -1.3
SGMS1-202ENST00000361781 KRTAP10-8P60410 259 aa6.96□□□□□ -1.3
SGMS1-202ENST00000361781 LUZP6Q538Z0 58 aa6.94□□□□□ -1.3
SGMS1-202ENST00000361781 TPRXLQ17RH7 258 aa6.92□□□□□ -1.3
SGMS1-202ENST00000361781 DYNC2H1Q8NCM8 4307 aaKnown RBP6.92□□□□□ -1.3
SGMS1-202ENST00000361781 MYCBP2O75592 4640 aa6.91□□□□□ -1.3
SGMS1-202ENST00000361781 DNAH5Q8TE73 4624 aa6.9□□□□□ -1.3
SGMS1-202ENST00000361781 KRTAP12-2P59991 146 aa6.9□□□□□ -1.31
SGMS1-202ENST00000361781 KRTAP10-6P60371 365 aaPredicted RBP6.88□□□□□ -1.31
SGMS1-202ENST00000361781 SACSQ9NZJ4 4579 aa6.85□□□□□ -1.31
SGMS1-202ENST00000361781 SEC61BP60468 96 aaKnown RBP6.8□□□□□ -1.32
SGMS1-202ENST00000361781 A0A1B0GVY2 172 aa6.79□□□□□ -1.32
SGMS1-202ENST00000361781 RYR3Q15413 4870 aa6.76□□□□□ -1.33
SGMS1-202ENST00000361781 KRTAP3-3Q9BYR6 98 aa6.76□□□□□ -1.33
SGMS1-202ENST00000361781 KRTAP12-1P59990 96 aa6.75□□□□□ -1.33
SGMS1-202ENST00000361781 LRP1Q07954 4544 aaKnown RBP6.73□□□□□ -1.33
SGMS1-202ENST00000361781 DYNC1H1Q14204 4646 aaKnown RBP6.73□□□□□ -1.33
SGMS1-202ENST00000361781 KRTAP3-2Q9BYR7 98 aa6.72□□□□□ -1.33
SGMS1-202ENST00000361781 KIAA1109Q2LD37 5005 aa6.71□□□□□ -1.34
SGMS1-202ENST00000361781 PKD1P98161 4303 aa6.71□□□□□ -1.34
SGMS1-202ENST00000361781 M0R2T5 61 aa6.7□□□□□ -1.34
SGMS1-202ENST00000361781 FAT3Q8TDW7 4589 aa6.7□□□□□ -1.34
SGMS1-202ENST00000361781 PLAC4Q8WY50 150 aa6.67□□□□□ -1.34
SGMS1-202ENST00000361781 KRTAP10-4P60372 401 aaPredicted RBP6.66□□□□□ -1.34
SGMS1-202ENST00000361781 APOBP04114 4563 aaKnown RBP6.66□□□□□ -1.34
SGMS1-202ENST00000361781 A0A0A0MQY5 61 aa6.63□□□□□ -1.35
SGMS1-202ENST00000361781 RYR2Q92736 4967 aa6.63□□□□□ -1.35
SGMS1-202ENST00000361781 EPPK1P58107 5090 aaKnown RBP6.6□□□□□ -1.35
SGMS1-202ENST00000361781 RYR1P21817 5038 aa6.51□□□□□ -1.37
SGMS1-202ENST00000361781 HSPG2P98160 4391 aa6.49□□□□□ -1.37
SGMS1-202ENST00000361781 KRTAP15-1Q3LI76 137 aa6.48□□□□□ -1.37
SGMS1-202ENST00000361781 KRTAP21-3Q3LHN1 58 aa6.46□□□□□ -1.37
SGMS1-202ENST00000361781 TNP1P09430 55 aa6.46□□□□□ -1.38
SGMS1-202ENST00000361781 MT1HL1P0DM35 61 aa6.46□□□□□ -1.38
SGMS1-202ENST00000361781 KRTAP17-1Q9BYP8 105 aa6.44□□□□□ -1.38
SGMS1-202ENST00000361781 LPAP08519 4548 aa6.39□□□□□ -1.39
SGMS1-202ENST00000361781 ABCA13Q86UQ4 5058 aa6.37□□□□□ -1.39
SGMS1-202ENST00000361781 LORP23490 312 aaPredicted RBP6.37□□□□□ -1.39
SGMS1-202ENST00000361781 LRP2P98164 4655 aa6.36□□□□□ -1.39
SGMS1-202ENST00000361781 PP632Q6XCG6 107 aa6.35□□□□□ -1.39
SGMS1-202ENST00000361781 PKHD1L1Q86WI1 4243 aa6.33□□□□□ -1.4
SGMS1-202ENST00000361781 MUC2Q02817 5179 aa6.33□□□□□ -1.4
SGMS1-202ENST00000361781 KRTAP4-5Q9BYR2 181 aa6.32□□□□□ -1.4
SGMS1-202ENST00000361781 HERC1Q15751 4861 aa6.17□□□□□ -1.42
SGMS1-202ENST00000361781 HERC2O95714 4834 aa6.17□□□□□ -1.42
SGMS1-202ENST00000361781 KRTAP10-10P60014 251 aa6.13□□□□□ -1.43
SGMS1-202ENST00000361781 TNXBP22105 4242 aa6.12□□□□□ -1.43
SGMS1-202ENST00000361781 RNF213Q63HN8 5207 aa6.1□□□□□ -1.43
SGMS1-202ENST00000361781 KRTAP4-1Q9BYQ7 146 aa6.08□□□□□ -1.44
SGMS1-202ENST00000361781 PCLOQ9Y6V0 5065 aa6.07□□□□□ -1.44
SGMS1-202ENST00000361781 FAT4Q6V0I7 4981 aa5.99□□□□□ -1.45
SGMS1-202ENST00000361781 UBR4Q5T4S7 5183 aa5.92□□□□□ -1.46
SGMS1-202ENST00000361781 LCE3AQ5TA76 89 aa5.78□□□□□ -1.48
SGMS1-202ENST00000361781 BIRC6Q9NR09 4857 aa5.78□□□□□ -1.48
SGMS1-202ENST00000361781 HMCN2Q8NDA2 5059 aa5.66□□□□□ -1.5
SGMS1-202ENST00000361781 PRO2289Q9P1D8 64 aa5.62□□□□□ -1.51
SGMS1-202ENST00000361781 KRTAP10-12P60413 245 aa5.59□□□□□ -1.51
SGMS1-202ENST00000361781 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
SGMS1-202ENST00000361781 FSIP2Q5CZC0 6907 aa5.55□□□□□ -1.52
SGMS1-202ENST00000361781 KRTAP23-1A1A580 65 aa5.53□□□□□ -1.52
SGMS1-202ENST00000361781 MUC17Q685J3 4493 aa5.52□□□□□ -1.53
SGMS1-202ENST00000361781 SPRR2GQ9BYE4 73 aa5.47□□□□□ -1.53
SGMS1-202ENST00000361781 MT1FP04733 61 aa5.47□□□□□ -1.53
SGMS1-202ENST00000361781 KRTAP19-1Q8IUB9 90 aa5.46□□□□□ -1.53
SGMS1-202ENST00000361781 MT2AP02795 61 aa5.45□□□□□ -1.54
SGMS1-202ENST00000361781 MT1HP80294 61 aa5.45□□□□□ -1.54
SGMS1-202ENST00000361781 USH2AO75445 5202 aa5.42□□□□□ -1.54
SGMS1-202ENST00000361781 KRTAP19-2Q3LHN2 52 aa5.41□□□□□ -1.54
SGMS1-202ENST00000361781 INE1O15225 51 aa5.37□□□□□ -1.55
SGMS1-202ENST00000361781 FLGP20930 4061 aaPredicted RBP5.34□□□□□ -1.55
SGMS1-202ENST00000361781 KRTAP8-1Q8IUC2 63 aa5.29□□□□□ -1.56
SGMS1-202ENST00000361781 LCE2CQ5TA81 110 aa5.28□□□□□ -1.56
SGMS1-202ENST00000361781 SPRR5A0A1B0GTR4 108 aa5.27□□□□□ -1.57
SGMS1-202ENST00000361781 KRTAP10-7P60409 375 aaPredicted RBP5.25□□□□□ -1.57
SGMS1-202ENST00000361781 CRCT1Q9UGL9 99 aa5.24□□□□□ -1.57
SGMS1-202ENST00000361781 KMT2DO14686 5537 aa5.19□□□□□ -1.58
SGMS1-202ENST00000361781 MT1XP80297 61 aa5.19□□□□□ -1.58
SGMS1-202ENST00000361781 KRTAP19-5Q3LI72 72 aa5.18□□□□□ -1.58
SGMS1-202ENST00000361781 KRTAP10-5P60370 271 aa5.17□□□□□ -1.58
SGMS1-202ENST00000361781 KRTAP9-8Q9BYQ0 159 aa5.16□□□□□ -1.58
SGMS1-202ENST00000361781 MT1BP07438 61 aa5.15□□□□□ -1.58
SGMS1-202ENST00000361781 KRTAP19-8Q3LI54 63 aa5.1□□□□□ -1.59
SGMS1-202ENST00000361781 KRTAP4-8A0A0G2JLE6 195 aa5.05□□□□□ -1.6
SGMS1-202ENST00000361781 KRTAP4-8Q9BYQ9 185 aa5.05□□□□□ -1.6
SGMS1-202ENST00000361781 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
SGMS1-202ENST00000361781 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
SGMS1-202ENST00000361781 KRTAP9-3Q9BYQ3 159 aa4.93□□□□□ -1.62
SGMS1-202ENST00000361781 KRTAP4-7Q9BYR0 210 aa4.93□□□□□ -1.62
SGMS1-202ENST00000361781 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
SGMS1-202ENST00000361781 LCE2BO14633 110 aa4.82□□□□□ -1.64
SGMS1-202ENST00000361781 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
SGMS1-202ENST00000361781 LCE2DQ5TA82 110 aaPredicted RBP4.78□□□□□ -1.64
SGMS1-202ENST00000361781 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.65
SGMS1-202ENST00000361781 SSPOA2VEC9 5147 aa4.66□□□□□ -1.66
SGMS1-202ENST00000361781 MT1GP13640 62 aa4.66□□□□□ -1.66
SGMS1-202ENST00000361781 KRTAP9-6A8MVA2 160 aa4.64□□□□□ -1.67
SGMS1-202ENST00000361781 MUC12Q9UKN1 5478 aa4.59□□□□□ -1.67
SGMS1-202ENST00000361781 KRTAP12-4P60329 112 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms