RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 KRTAP4-5Q9BYR2 181 aa10.38□□□□□ -0.75
CHD1L-201ENST00000361293 MIR22HGQ0VDD5 57 aa10.37□□□□□ -0.75
CHD1L-201ENST00000361293 LPAP08519 4548 aa10.27□□□□□ -0.77
CHD1L-201ENST00000361293 LRP2P98164 4655 aa10.25□□□□□ -0.77
CHD1L-201ENST00000361293 ABCA13Q86UQ4 5058 aa10.25□□□□□ -0.77
CHD1L-201ENST00000361293 KTN1-AS1Q86SY8 53 aa10.24□□□□□ -0.77
CHD1L-201ENST00000361293 KRTAP3-3Q9BYR6 98 aa10.23□□□□□ -0.77
CHD1L-201ENST00000361293 TPRXLQ17RH7 258 aa10.22□□□□□ -0.77
CHD1L-201ENST00000361293 H0YAA0 97 aa10.2□□□□□ -0.78
CHD1L-201ENST00000361293 A0A1B0GU33 70 aa10.16□□□□□ -0.78
CHD1L-201ENST00000361293 H1FX-AS1Q4G0G2 97 aa10.14□□□□□ -0.79
CHD1L-201ENST00000361293 S4R3F8 94 aa10.12□□□□□ -0.79
CHD1L-201ENST00000361293 KRTAP10-6P60371 365 aaPredicted RBP10.04□□□□□ -0.8
CHD1L-201ENST00000361293 ADM2Q7Z4H4 148 aa10□□□□□ -0.81
CHD1L-201ENST00000361293 KRTAP3-2Q9BYR7 98 aa9.99□□□□□ -0.81
CHD1L-201ENST00000361293 PRAC1Q96KF2 57 aa9.96□□□□□ -0.82
CHD1L-201ENST00000361293 HERC2O95714 4834 aa9.94□□□□□ -0.82
CHD1L-201ENST00000361293 J3QL48 77 aa9.92□□□□□ -0.82
CHD1L-201ENST00000361293 RBM12B-AS1Q9P1G2 102 aa9.92□□□□□ -0.82
CHD1L-201ENST00000361293 KRTAP13-4Q3LI77 160 aa9.91□□□□□ -0.82
CHD1L-201ENST00000361293 P0C880 135 aa9.9□□□□□ -0.82
CHD1L-201ENST00000361293 KRTAP4-1Q9BYQ7 146 aa9.81□□□□□ -0.84
CHD1L-201ENST00000361293 SEC61BP60468 96 aaKnown RBP9.8□□□□□ -0.84
CHD1L-201ENST00000361293 MUC17Q685J3 4493 aa9.78□□□□□ -0.84
CHD1L-201ENST00000361293 CSAG1Q6PB30 78 aa9.78□□□□□ -0.84
CHD1L-201ENST00000361293 BIRC6Q9NR09 4857 aa9.77□□□□□ -0.85
CHD1L-201ENST00000361293 A0A0D9SG42 100 aa9.77□□□□□ -0.85
CHD1L-201ENST00000361293 K7ERS5 55 aa9.67□□□□□ -0.86
CHD1L-201ENST00000361293 KRTAP19-2Q3LHN2 52 aa9.58□□□□□ -0.88
CHD1L-201ENST00000361293 MUC2Q02817 5179 aa9.56□□□□□ -0.88
CHD1L-201ENST00000361293 PCLOQ9Y6V0 5065 aa9.55□□□□□ -0.88
CHD1L-201ENST00000361293 KRTAP12-2P59991 146 aa9.54□□□□□ -0.88
CHD1L-201ENST00000361293 HERC1Q15751 4861 aa9.51□□□□□ -0.89
CHD1L-201ENST00000361293 M0QZ58 72 aa9.48□□□□□ -0.89
CHD1L-201ENST00000361293 KRTAP12-1P59990 96 aa9.48□□□□□ -0.89
CHD1L-201ENST00000361293 CRIPTQ9P021 101 aa9.48□□□□□ -0.89
CHD1L-201ENST00000361293 ROMO1P60602 79 aa9.46□□□□□ -0.89
CHD1L-201ENST00000361293 SPINT4Q6UDR6 99 aa9.44□□□□□ -0.9
CHD1L-201ENST00000361293 KRTAP25-1Q3LHN0 102 aa9.43□□□□□ -0.9
CHD1L-201ENST00000361293 LINC01554Q52M75 96 aa9.43□□□□□ -0.9
CHD1L-201ENST00000361293 LORP23490 312 aaPredicted RBP9.42□□□□□ -0.9
CHD1L-201ENST00000361293 HMCN2Q8NDA2 5059 aa9.38□□□□□ -0.91
CHD1L-201ENST00000361293 R4GN34 69 aa9.37□□□□□ -0.91
CHD1L-201ENST00000361293 FLGP20930 4061 aaPredicted RBP9.28□□□□□ -0.92
CHD1L-201ENST00000361293 C10orf95Q9H7T3 257 aa9.2□□□□□ -0.94
CHD1L-201ENST00000361293 LCE2CQ5TA81 110 aa9.12□□□□□ -0.95
CHD1L-201ENST00000361293 FAT4Q6V0I7 4981 aa9.1□□□□□ -0.95
CHD1L-201ENST00000361293 H3BS24 57 aa9.05□□□□□ -0.96
CHD1L-201ENST00000361293 UBR4Q5T4S7 5183 aa9.02□□□□□ -0.96
CHD1L-201ENST00000361293 RNF213Q63HN8 5207 aa8.98□□□□□ -0.97
CHD1L-201ENST00000361293 MT1HP80294 61 aa8.88□□□□□ -0.99
CHD1L-201ENST00000361293 CAMK2N1Q7Z7J9 78 aa8.84□□□□□ -0.99
CHD1L-201ENST00000361293 M0R2T5 61 aa8.83□□□□□ -1
CHD1L-201ENST00000361293 KRTAP19-1Q8IUB9 90 aa8.72□□□□□ -1.01
CHD1L-201ENST00000361293 SPRR2GQ9BYE4 73 aa8.71□□□□□ -1.02
CHD1L-201ENST00000361293 MT2AP02795 61 aa8.67□□□□□ -1.02
CHD1L-201ENST00000361293 MT1FP04733 61 aa8.67□□□□□ -1.02
CHD1L-201ENST00000361293 KRTAP9-8Q9BYQ0 159 aa8.64□□□□□ -1.03
CHD1L-201ENST00000361293 KRTAP10-10P60014 251 aa8.61□□□□□ -1.03
CHD1L-201ENST00000361293 KRTAP15-1Q3LI76 137 aa8.54□□□□□ -1.04
CHD1L-201ENST00000361293 PLAC4Q8WY50 150 aa8.51□□□□□ -1.05
CHD1L-201ENST00000361293 TNP1P09430 55 aa8.46□□□□□ -1.06
CHD1L-201ENST00000361293 PP632Q6XCG6 107 aa8.44□□□□□ -1.06
CHD1L-201ENST00000361293 KRTAP19-8Q3LI54 63 aa8.37□□□□□ -1.07
CHD1L-201ENST00000361293 MT1BP07438 61 aa8.31□□□□□ -1.08
CHD1L-201ENST00000361293 KRTAP9-3Q9BYQ3 159 aa8.29□□□□□ -1.08
CHD1L-201ENST00000361293 KRTAP23-1A1A580 65 aa8.24□□□□□ -1.09
CHD1L-201ENST00000361293 NDUFAF8A1L188 74 aa8.2□□□□□ -1.1
CHD1L-201ENST00000361293 KRTAP10-5P60370 271 aa8.18□□□□□ -1.1
CHD1L-201ENST00000361293 MT1XP80297 61 aa8.18□□□□□ -1.1
CHD1L-201ENST00000361293 LCE3AQ5TA76 89 aa8.13□□□□□ -1.11
CHD1L-201ENST00000361293 LCE2AQ5TA79 106 aaPredicted RBP8.08□□□□□ -1.12
CHD1L-201ENST00000361293 LCE2BO14633 110 aa8.03□□□□□ -1.12
CHD1L-201ENST00000361293 KRTAP10-7P60409 375 aaPredicted RBP7.94□□□□□ -1.14
CHD1L-201ENST00000361293 USH2AO75445 5202 aa7.9□□□□□ -1.14
CHD1L-201ENST00000361293 KRTAP10-12P60413 245 aa7.89□□□□□ -1.15
CHD1L-201ENST00000361293 KRTAP8-1Q8IUC2 63 aa7.89□□□□□ -1.15
CHD1L-201ENST00000361293 PRO2289Q9P1D8 64 aa7.84□□□□□ -1.15
CHD1L-201ENST00000361293 SPRR5A0A1B0GTR4 108 aa7.83□□□□□ -1.16
CHD1L-201ENST00000361293 LUZP6Q538Z0 58 aa7.79□□□□□ -1.16
CHD1L-201ENST00000361293 KRTAP12-3P60328 96 aa7.72□□□□□ -1.17
CHD1L-201ENST00000361293 KMT2DO14686 5537 aa7.6□□□□□ -1.19
CHD1L-201ENST00000361293 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
CHD1L-201ENST00000361293 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
CHD1L-201ENST00000361293 KRTAP19-5Q3LI72 72 aa7.54□□□□□ -1.2
CHD1L-201ENST00000361293 A0A0A0MQY5 61 aa7.48□□□□□ -1.21
CHD1L-201ENST00000361293 SSPOA2VEC9 5147 aa7.41□□□□□ -1.22
CHD1L-201ENST00000361293 KRTAP19-7Q3SYF9 63 aa7.3□□□□□ -1.24
CHD1L-201ENST00000361293 FSIP2Q5CZC0 6907 aa7.3□□□□□ -1.24
CHD1L-201ENST00000361293 KRTAP19-6Q3LI70 58 aa7.26□□□□□ -1.25
CHD1L-201ENST00000361293 LCE3CQ5T5A8 94 aa7.25□□□□□ -1.25
CHD1L-201ENST00000361293 MT1EP04732 61 aa7.09□□□□□ -1.27
CHD1L-201ENST00000361293 KRTAP4-7Q9BYR0 210 aa7.09□□□□□ -1.27
CHD1L-201ENST00000361293 MT1LQ93083 61 aa7.05□□□□□ -1.28
CHD1L-201ENST00000361293 KRTAP9-6A8MVA2 160 aa7.04□□□□□ -1.28
CHD1L-201ENST00000361293 LCE2DQ5TA82 110 aaPredicted RBP6.99□□□□□ -1.29
CHD1L-201ENST00000361293 FCGBPQ9Y6R7 5405 aaPredicted RBP6.96□□□□□ -1.3
CHD1L-201ENST00000361293 KRTAP19-4Q3LI73 84 aa6.84□□□□□ -1.31
CHD1L-201ENST00000361293 MUC12Q9UKN1 5478 aa6.79□□□□□ -1.32
CHD1L-201ENST00000361293 KRTAP4-3Q9BYR4 195 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms