RNA–Protein interactions for RNA: ENST00000359972.6

APAF1-203, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 7,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-203ENST00000359972 KRTAP10-4P60372 401 aaPredicted RBP5.93□□□□□ -1.46
APAF1-203ENST00000359972 FBN1P35555 2871 aaKnown RBP5.87□□□□□ -1.47
APAF1-203ENST00000359972 OTOGQ6ZRI0 2925 aa5.83□□□□□ -1.48
APAF1-203ENST00000359972 LCE3CQ5T5A8 94 aa5.8□□□□□ -1.48
APAF1-203ENST00000359972 BSNQ9UPA5 3926 aa5.8□□□□□ -1.48
APAF1-203ENST00000359972 KRTAP19-5Q3LI72 72 aa5.8□□□□□ -1.48
APAF1-203ENST00000359972 DNAH8Q96JB1 4490 aa5.7□□□□□ -1.5
APAF1-203ENST00000359972 AKAP9Q99996 3911 aa5.68□□□□□ -1.5
APAF1-203ENST00000359972 DNAH2Q9P225 4427 aa5.68□□□□□ -1.5
APAF1-203ENST00000359972 KRTAP4-1Q9BYQ7 146 aa5.65□□□□□ -1.5
APAF1-203ENST00000359972 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
APAF1-203ENST00000359972 DNAH10Q8IVF4 4471 aa5.57□□□□□ -1.52
APAF1-203ENST00000359972 SPRR2GQ9BYE4 73 aa5.57□□□□□ -1.52
APAF1-203ENST00000359972 DNAH1Q9P2D7 4330 aa5.56□□□□□ -1.52
APAF1-203ENST00000359972 KRTAP12-4P60329 112 aa5.56□□□□□ -1.52
APAF1-203ENST00000359972 LCE3BQ5TA77 95 aa5.55□□□□□ -1.52
APAF1-203ENST00000359972 MT1HP80294 61 aa5.54□□□□□ -1.52
APAF1-203ENST00000359972 DNAH11Q96DT5 4516 aa5.52□□□□□ -1.53
APAF1-203ENST00000359972 MT2AP02795 61 aa5.51□□□□□ -1.53
APAF1-203ENST00000359972 SPRR2FQ96RM1 72 aa5.5□□□□□ -1.53
APAF1-203ENST00000359972 MT1FP04733 61 aa5.43□□□□□ -1.54
APAF1-203ENST00000359972 ZNF469Q96JG9 3925 aaPredicted RBP5.4□□□□□ -1.55
APAF1-203ENST00000359972 DNAH9Q9NYC9 4486 aa5.39□□□□□ -1.55
APAF1-203ENST00000359972 DNAH3Q8TD57 4116 aa5.37□□□□□ -1.55
APAF1-203ENST00000359972 DNAH5Q8TE73 4624 aa5.35□□□□□ -1.55
APAF1-203ENST00000359972 MT1GP13640 62 aa5.33□□□□□ -1.56
APAF1-203ENST00000359972 ANK2Q01484 3957 aa5.33□□□□□ -1.56
APAF1-203ENST00000359972 DNAH17Q9UFH2 4485 aa5.3□□□□□ -1.56
APAF1-203ENST00000359972 FRAS1Q86XX4 4008 aa5.3□□□□□ -1.56
APAF1-203ENST00000359972 FAT1Q14517 4588 aa5.29□□□□□ -1.56
APAF1-203ENST00000359972 SPRR5A0A1B0GTR4 108 aa5.27□□□□□ -1.57
APAF1-203ENST00000359972 CMYA5Q8N3K9 4069 aa5.24□□□□□ -1.57
APAF1-203ENST00000359972 PLECQ15149 4684 aaKnown RBP5.22□□□□□ -1.57
APAF1-203ENST00000359972 SPRR2EP22531 72 aa5.21□□□□□ -1.58
APAF1-203ENST00000359972 SPRR2BP35325 72 aa5.21□□□□□ -1.58
APAF1-203ENST00000359972 SPRR2AP35326 72 aa5.21□□□□□ -1.58
APAF1-203ENST00000359972 LCE3DQ9BYE3 92 aa5.2□□□□□ -1.58
APAF1-203ENST00000359972 DNAH6Q9C0G6 4158 aa5.19□□□□□ -1.58
APAF1-203ENST00000359972 KRTAP19-4Q3LI73 84 aa5.18□□□□□ -1.58
APAF1-203ENST00000359972 VPS13BQ7Z7G8 4022 aa5.12□□□□□ -1.59
APAF1-203ENST00000359972 LCE3EQ5T5B0 92 aa5.12□□□□□ -1.59
APAF1-203ENST00000359972 VPS13DQ5THJ4 4388 aa5.12□□□□□ -1.59
APAF1-203ENST00000359972 MT1XP80297 61 aa5.11□□□□□ -1.59
APAF1-203ENST00000359972 SACSQ9NZJ4 4579 aa5.11□□□□□ -1.59
APAF1-203ENST00000359972 FAT2Q9NYQ8 4349 aa5.1□□□□□ -1.59
APAF1-203ENST00000359972 APOBP04114 4563 aaKnown RBP5.1□□□□□ -1.59
APAF1-203ENST00000359972 KMT2AQ03164 3969 aa5.07□□□□□ -1.6
APAF1-203ENST00000359972 DYNC2H1Q8NCM8 4307 aaKnown RBP5.06□□□□□ -1.6
APAF1-203ENST00000359972 KRTAP19-1Q8IUB9 90 aa5.05□□□□□ -1.6
APAF1-203ENST00000359972 KRTAP4-8A0A0G2JLE6 195 aa5.03□□□□□ -1.6
APAF1-203ENST00000359972 KRTAP4-8Q9BYQ9 185 aa5.03□□□□□ -1.6
APAF1-203ENST00000359972 LRP1BQ9NZR2 4599 aa5.03□□□□□ -1.6
APAF1-203ENST00000359972 PRM1P04553 51 aa5.02□□□□□ -1.61
APAF1-203ENST00000359972 DNAH7Q8WXX0 4024 aa5.01□□□□□ -1.61
APAF1-203ENST00000359972 KRTAP19-8Q3LI54 63 aa5□□□□□ -1.61
APAF1-203ENST00000359972 SPRR2DP22532 72 aa4.99□□□□□ -1.61
APAF1-203ENST00000359972 LYSTQ99698 3801 aa4.99□□□□□ -1.61
APAF1-203ENST00000359972 STARD9Q9P2P6 4700 aa4.95□□□□□ -1.62
APAF1-203ENST00000359972 KRTAP4-7Q9BYR0 210 aa4.95□□□□□ -1.62
APAF1-203ENST00000359972 PRKDCP78527 4128 aaKnown RBP4.95□□□□□ -1.62
APAF1-203ENST00000359972 DYNC1H1Q14204 4646 aaKnown RBP4.9□□□□□ -1.63
APAF1-203ENST00000359972 LCE2BO14633 110 aa4.89□□□□□ -1.63
APAF1-203ENST00000359972 MT1BP07438 61 aa4.89□□□□□ -1.63
APAF1-203ENST00000359972 HECTD4Q9Y4D8 3996 aa4.84□□□□□ -1.64
APAF1-203ENST00000359972 LRP1Q07954 4544 aaKnown RBP4.79□□□□□ -1.64
APAF1-203ENST00000359972 MT4P47944 62 aa4.72□□□□□ -1.65
APAF1-203ENST00000359972 FAT3Q8TDW7 4589 aa4.71□□□□□ -1.65
APAF1-203ENST00000359972 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
APAF1-203ENST00000359972 MT1LQ93083 61 aa4.69□□□□□ -1.66
APAF1-203ENST00000359972 KRTAP9-8Q9BYQ0 159 aa4.68□□□□□ -1.66
APAF1-203ENST00000359972 KRTAP19-3Q7Z4W3 81 aa4.64□□□□□ -1.67
APAF1-203ENST00000359972 MYCBP2O75592 4640 aa4.64□□□□□ -1.67
APAF1-203ENST00000359972 PKD1P98161 4303 aa4.64□□□□□ -1.67
APAF1-203ENST00000359972 LCE2CQ5TA81 110 aa4.63□□□□□ -1.67
APAF1-203ENST00000359972 LPAP08519 4548 aa4.63□□□□□ -1.67
APAF1-203ENST00000359972 RYR1P21817 5038 aa4.62□□□□□ -1.67
APAF1-203ENST00000359972 LCE2DQ5TA82 110 aaPredicted RBP4.6□□□□□ -1.67
APAF1-203ENST00000359972 KRTAP9-3Q9BYQ3 159 aa4.58□□□□□ -1.68
APAF1-203ENST00000359972 MT1EP04732 61 aa4.58□□□□□ -1.68
APAF1-203ENST00000359972 LCE1BQ5T7P3 118 aa4.55□□□□□ -1.68
APAF1-203ENST00000359972 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
APAF1-203ENST00000359972 KRTAP17-1Q9BYP8 105 aa4.54□□□□□ -1.68
APAF1-203ENST00000359972 KRTAP4-9Q9BYQ8 210 aa4.54□□□□□ -1.68
APAF1-203ENST00000359972 MT3P25713 68 aa4.52□□□□□ -1.69
APAF1-203ENST00000359972 LCE1DQ5T752 114 aa4.48□□□□□ -1.69
APAF1-203ENST00000359972 MT1MQ8N339 61 aa4.46□□□□□ -1.7
APAF1-203ENST00000359972 DNHD1Q96M86 4753 aa4.45□□□□□ -1.7
APAF1-203ENST00000359972 FLGP20930 4061 aaPredicted RBP4.42□□□□□ -1.7
APAF1-203ENST00000359972 RYR3Q15413 4870 aa4.38□□□□□ -1.71
APAF1-203ENST00000359972 PKHD1P08F94 4074 aa4.37□□□□□ -1.71
APAF1-203ENST00000359972 PKHD1L1Q86WI1 4243 aa4.36□□□□□ -1.71
APAF1-203ENST00000359972 HSPG2P98160 4391 aa4.35□□□□□ -1.71
APAF1-203ENST00000359972 KRTAP2-3P0C7H8 128 aa4.34□□□□□ -1.72
APAF1-203ENST00000359972 KRTAP2-4Q9BYR9 128 aa4.34□□□□□ -1.72
APAF1-203ENST00000359972 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.72
APAF1-203ENST00000359972 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
APAF1-203ENST00000359972 TNXBP22105 4242 aa4.25□□□□□ -1.73
APAF1-203ENST00000359972 SYNE2Q8WXH0 6885 aaKnown RBP4.25□□□□□ -1.73
APAF1-203ENST00000359972 LRP2P98164 4655 aa4.25□□□□□ -1.73
APAF1-203ENST00000359972 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms