RNA–Protein interactions for RNA: ENST00000359513.8

ATG13-201, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 4,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-201ENST00000359513 FAT1Q14517 4588 aa4.41□□□□□ -1.7
ATG13-201ENST00000359513 ROMO1P60602 79 aa4.41□□□□□ -1.7
ATG13-201ENST00000359513 KRTAP4-5Q9BYR2 181 aa4.39□□□□□ -1.71
ATG13-201ENST00000359513 MT1HL1P0DM35 61 aa4.37□□□□□ -1.71
ATG13-201ENST00000359513 KIAA1109Q2LD37 5005 aa4.35□□□□□ -1.71
ATG13-201ENST00000359513 KRTAP10-4P60372 401 aaPredicted RBP4.34□□□□□ -1.72
ATG13-201ENST00000359513 NDUFAF8A1L188 74 aa4.33□□□□□ -1.72
ATG13-201ENST00000359513 KRTAP10-10P60014 251 aa4.33□□□□□ -1.72
ATG13-201ENST00000359513 HYDINQ4G0P3 5121 aa4.33□□□□□ -1.72
ATG13-201ENST00000359513 DYNC1H1Q14204 4646 aaKnown RBP4.32□□□□□ -1.72
ATG13-201ENST00000359513 LRP1BQ9NZR2 4599 aa4.31□□□□□ -1.72
ATG13-201ENST00000359513 P0C880 135 aa4.31□□□□□ -1.72
ATG13-201ENST00000359513 KRTAP3-1Q9BYR8 98 aa4.3□□□□□ -1.72
ATG13-201ENST00000359513 LUZP6Q538Z0 58 aa4.3□□□□□ -1.72
ATG13-201ENST00000359513 KMT2CQ8NEZ4 4911 aaKnown RBP4.29□□□□□ -1.72
ATG13-201ENST00000359513 RYR1P21817 5038 aa4.28□□□□□ -1.72
ATG13-201ENST00000359513 PKD1P98161 4303 aa4.27□□□□□ -1.73
ATG13-201ENST00000359513 RYR3Q15413 4870 aa4.26□□□□□ -1.73
ATG13-201ENST00000359513 SACSQ9NZJ4 4579 aa4.25□□□□□ -1.73
ATG13-201ENST00000359513 VPS13BQ7Z7G8 4022 aa4.25□□□□□ -1.73
ATG13-201ENST00000359513 TNP1P09430 55 aa4.22□□□□□ -1.73
ATG13-201ENST00000359513 PKHD1P08F94 4074 aa4.21□□□□□ -1.74
ATG13-201ENST00000359513 FAT2Q9NYQ8 4349 aa4.21□□□□□ -1.74
ATG13-201ENST00000359513 PKHD1L1Q86WI1 4243 aa4.2□□□□□ -1.74
ATG13-201ENST00000359513 MYCBP2O75592 4640 aa4.2□□□□□ -1.74
ATG13-201ENST00000359513 LRP1Q07954 4544 aaKnown RBP4.18□□□□□ -1.74
ATG13-201ENST00000359513 KRTAP17-1Q9BYP8 105 aa4.18□□□□□ -1.74
ATG13-201ENST00000359513 APOBP04114 4563 aaKnown RBP4.17□□□□□ -1.74
ATG13-201ENST00000359513 FAT3Q8TDW7 4589 aa4.17□□□□□ -1.74
ATG13-201ENST00000359513 RYR2Q92736 4967 aa4.17□□□□□ -1.74
ATG13-201ENST00000359513 C10orf95Q9H7T3 257 aa4.16□□□□□ -1.74
ATG13-201ENST00000359513 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
ATG13-201ENST00000359513 KRTAP10-6P60371 365 aaPredicted RBP4.15□□□□□ -1.74
ATG13-201ENST00000359513 KRTAP13-4Q3LI77 160 aa4.13□□□□□ -1.75
ATG13-201ENST00000359513 KRTAP3-3Q9BYR6 98 aa4.11□□□□□ -1.75
ATG13-201ENST00000359513 KRTAP3-2Q9BYR7 98 aa4.11□□□□□ -1.75
ATG13-201ENST00000359513 PRO2289Q9P1D8 64 aa4.07□□□□□ -1.76
ATG13-201ENST00000359513 EPPK1P58107 5090 aaKnown RBP4.07□□□□□ -1.76
ATG13-201ENST00000359513 HERC2O95714 4834 aa4.03□□□□□ -1.76
ATG13-201ENST00000359513 KRTAP12-2P59991 146 aa4.01□□□□□ -1.77
ATG13-201ENST00000359513 TNXBP22105 4242 aa4□□□□□ -1.77
ATG13-201ENST00000359513 PP632Q6XCG6 107 aa4□□□□□ -1.77
ATG13-201ENST00000359513 KRTAP12-1P59990 96 aa3.98□□□□□ -1.77
ATG13-201ENST00000359513 HSPG2P98160 4391 aa3.97□□□□□ -1.77
ATG13-201ENST00000359513 LRP2P98164 4655 aa3.95□□□□□ -1.78
ATG13-201ENST00000359513 ABCA13Q86UQ4 5058 aa3.9□□□□□ -1.79
ATG13-201ENST00000359513 BIRC6Q9NR09 4857 aa3.89□□□□□ -1.79
ATG13-201ENST00000359513 KRTAP4-1Q9BYQ7 146 aa3.89□□□□□ -1.79
ATG13-201ENST00000359513 LPAP08519 4548 aa3.85□□□□□ -1.79
ATG13-201ENST00000359513 HERC1Q15751 4861 aa3.81□□□□□ -1.8
ATG13-201ENST00000359513 PCLOQ9Y6V0 5065 aa3.8□□□□□ -1.8
ATG13-201ENST00000359513 LORP23490 312 aaPredicted RBP3.8□□□□□ -1.8
ATG13-201ENST00000359513 RNF213Q63HN8 5207 aa3.75□□□□□ -1.81
ATG13-201ENST00000359513 MT1HP80294 61 aa3.74□□□□□ -1.81
ATG13-201ENST00000359513 MUC2Q02817 5179 aa3.72□□□□□ -1.81
ATG13-201ENST00000359513 UBR4Q5T4S7 5183 aa3.69□□□□□ -1.82
ATG13-201ENST00000359513 MT2AP02795 61 aa3.66□□□□□ -1.82
ATG13-201ENST00000359513 KRTAP10-12P60413 245 aa3.66□□□□□ -1.82
ATG13-201ENST00000359513 FSIP2Q5CZC0 6907 aa3.61□□□□□ -1.83
ATG13-201ENST00000359513 MT1FP04733 61 aa3.6□□□□□ -1.83
ATG13-201ENST00000359513 FAT4Q6V0I7 4981 aa3.58□□□□□ -1.84
ATG13-201ENST00000359513 MUC17Q685J3 4493 aa3.58□□□□□ -1.84
ATG13-201ENST00000359513 SPRR5A0A1B0GTR4 108 aa3.58□□□□□ -1.84
ATG13-201ENST00000359513 SPRR2GQ9BYE4 73 aa3.55□□□□□ -1.84
ATG13-201ENST00000359513 KRTAP12-3P60328 96 aa3.54□□□□□ -1.84
ATG13-201ENST00000359513 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
ATG13-201ENST00000359513 KRTAP23-1A1A580 65 aa3.53□□□□□ -1.85
ATG13-201ENST00000359513 HMCN2Q8NDA2 5059 aa3.49□□□□□ -1.85
ATG13-201ENST00000359513 KRTAP19-2Q3LHN2 52 aa3.48□□□□□ -1.85
ATG13-201ENST00000359513 KRTAP8-1Q8IUC2 63 aa3.48□□□□□ -1.85
ATG13-201ENST00000359513 CRCT1Q9UGL9 99 aa3.47□□□□□ -1.85
ATG13-201ENST00000359513 LCE2CQ5TA81 110 aa3.45□□□□□ -1.86
ATG13-201ENST00000359513 KRTAP19-1Q8IUB9 90 aa3.44□□□□□ -1.86
ATG13-201ENST00000359513 FLGP20930 4061 aaPredicted RBP3.43□□□□□ -1.86
ATG13-201ENST00000359513 KRTAP9-8Q9BYQ0 159 aa3.4□□□□□ -1.86
ATG13-201ENST00000359513 KRTAP19-8Q3LI54 63 aa3.36□□□□□ -1.87
ATG13-201ENST00000359513 INE1O15225 51 aa3.33□□□□□ -1.88
ATG13-201ENST00000359513 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
ATG13-201ENST00000359513 MT1BP07438 61 aa3.31□□□□□ -1.88
ATG13-201ENST00000359513 KRTAP9-3Q9BYQ3 159 aa3.3□□□□□ -1.88
ATG13-201ENST00000359513 KRTAP19-5Q3LI72 72 aa3.27□□□□□ -1.89
ATG13-201ENST00000359513 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
ATG13-201ENST00000359513 MT1XP80297 61 aa3.26□□□□□ -1.89
ATG13-201ENST00000359513 KRTAP10-5P60370 271 aa3.25□□□□□ -1.89
ATG13-201ENST00000359513 USH2AO75445 5202 aa3.24□□□□□ -1.89
ATG13-201ENST00000359513 LCE2BO14633 110 aa3.21□□□□□ -1.9
ATG13-201ENST00000359513 KRTAP4-8A0A0G2JLE6 195 aa3.17□□□□□ -1.9
ATG13-201ENST00000359513 KRTAP4-8Q9BYQ9 185 aa3.17□□□□□ -1.9
ATG13-201ENST00000359513 LCE2AQ5TA79 106 aaPredicted RBP3.15□□□□□ -1.9
ATG13-201ENST00000359513 LCE2DQ5TA82 110 aaPredicted RBP3.14□□□□□ -1.91
ATG13-201ENST00000359513 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
ATG13-201ENST00000359513 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
ATG13-201ENST00000359513 SPRR2EP22531 72 aa3.09□□□□□ -1.92
ATG13-201ENST00000359513 SPRR2BP35325 72 aa3.09□□□□□ -1.92
ATG13-201ENST00000359513 SPRR2AP35326 72 aa3.09□□□□□ -1.92
ATG13-201ENST00000359513 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.92
ATG13-201ENST00000359513 KRTAP9-2Q9BYQ4 174 aa3.08□□□□□ -1.92
ATG13-201ENST00000359513 KRTAP19-4Q3LI73 84 aa3.04□□□□□ -1.92
ATG13-201ENST00000359513 KMT2DO14686 5537 aa3.03□□□□□ -1.92
ATG13-201ENST00000359513 KRTAP19-6Q3LI70 58 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms