RNA–Protein interactions for RNA: ENST00000359062.3

PDE3A-201, Transcript of phosphodiesterase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE3A, Length 7,576 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-201ENST00000359062 ZNF469Q96JG9 3925 aaPredicted RBP6.66□□□□□ -1.34
PDE3A-201ENST00000359062 LORP23490 312 aaPredicted RBP6.63□□□□□ -1.35
PDE3A-201ENST00000359062 KRTAP10-5P60370 271 aa6.59□□□□□ -1.36
PDE3A-201ENST00000359062 KRTAP23-1A1A580 65 aa6.53□□□□□ -1.36
PDE3A-201ENST00000359062 KRTAP10-4P60372 401 aaPredicted RBP6.49□□□□□ -1.37
PDE3A-201ENST00000359062 KRTAP8-1Q8IUC2 63 aa6.48□□□□□ -1.37
PDE3A-201ENST00000359062 DNAH2Q9P225 4427 aa6.44□□□□□ -1.38
PDE3A-201ENST00000359062 DNAH3Q8TD57 4116 aa6.43□□□□□ -1.38
PDE3A-201ENST00000359062 FRAS1Q86XX4 4008 aa6.39□□□□□ -1.39
PDE3A-201ENST00000359062 DNAH1Q9P2D7 4330 aa6.36□□□□□ -1.39
PDE3A-201ENST00000359062 DNAH9Q9NYC9 4486 aa6.3□□□□□ -1.4
PDE3A-201ENST00000359062 ANK2Q01484 3957 aa6.3□□□□□ -1.4
PDE3A-201ENST00000359062 KMT2AQ03164 3969 aa6.22□□□□□ -1.41
PDE3A-201ENST00000359062 DNAH10Q8IVF4 4471 aa6.21□□□□□ -1.42
PDE3A-201ENST00000359062 DNAH7Q8WXX0 4024 aa6.2□□□□□ -1.42
PDE3A-201ENST00000359062 CMYA5Q8N3K9 4069 aa6.19□□□□□ -1.42
PDE3A-201ENST00000359062 VPS13BQ7Z7G8 4022 aa6.18□□□□□ -1.42
PDE3A-201ENST00000359062 LYSTQ99698 3801 aa6.14□□□□□ -1.43
PDE3A-201ENST00000359062 MT1HP80294 61 aa6.09□□□□□ -1.43
PDE3A-201ENST00000359062 KRTAP4-1Q9BYQ7 146 aa6.08□□□□□ -1.44
PDE3A-201ENST00000359062 DNAH8Q96JB1 4490 aa6.07□□□□□ -1.44
PDE3A-201ENST00000359062 FAT2Q9NYQ8 4349 aa6.05□□□□□ -1.44
PDE3A-201ENST00000359062 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.45
PDE3A-201ENST00000359062 DNAH6Q9C0G6 4158 aa6.01□□□□□ -1.45
PDE3A-201ENST00000359062 KRTAP19-5Q3LI72 72 aa6□□□□□ -1.45
PDE3A-201ENST00000359062 SPRR2FQ96RM1 72 aa5.99□□□□□ -1.45
PDE3A-201ENST00000359062 DNAH11Q96DT5 4516 aa5.99□□□□□ -1.45
PDE3A-201ENST00000359062 SPRR2GQ9BYE4 73 aa5.94□□□□□ -1.46
PDE3A-201ENST00000359062 MT2AP02795 61 aa5.93□□□□□ -1.46
PDE3A-201ENST00000359062 PRKDCP78527 4128 aaKnown RBP5.93□□□□□ -1.46
PDE3A-201ENST00000359062 LCE3CQ5T5A8 94 aa5.92□□□□□ -1.46
PDE3A-201ENST00000359062 DYNC2H1Q8NCM8 4307 aaKnown RBP5.91□□□□□ -1.46
PDE3A-201ENST00000359062 HECTD4Q9Y4D8 3996 aa5.9□□□□□ -1.46
PDE3A-201ENST00000359062 PLECQ15149 4684 aaKnown RBP5.9□□□□□ -1.47
PDE3A-201ENST00000359062 VPS13DQ5THJ4 4388 aa5.87□□□□□ -1.47
PDE3A-201ENST00000359062 MT1FP04733 61 aa5.83□□□□□ -1.48
PDE3A-201ENST00000359062 DNAH5Q8TE73 4624 aa5.83□□□□□ -1.48
PDE3A-201ENST00000359062 DNAH17Q9UFH2 4485 aa5.83□□□□□ -1.48
PDE3A-201ENST00000359062 STARD9Q9P2P6 4700 aa5.79□□□□□ -1.48
PDE3A-201ENST00000359062 LRP1BQ9NZR2 4599 aa5.69□□□□□ -1.5
PDE3A-201ENST00000359062 LCE3BQ5TA77 95 aa5.68□□□□□ -1.5
PDE3A-201ENST00000359062 SPRR2EP22531 72 aa5.67□□□□□ -1.5
PDE3A-201ENST00000359062 SPRR2BP35325 72 aa5.67□□□□□ -1.5
PDE3A-201ENST00000359062 SPRR2AP35326 72 aa5.67□□□□□ -1.5
PDE3A-201ENST00000359062 FAT1Q14517 4588 aa5.56□□□□□ -1.52
PDE3A-201ENST00000359062 MT1GP13640 62 aa5.51□□□□□ -1.53
PDE3A-201ENST00000359062 SPRR2DP22532 72 aa5.47□□□□□ -1.53
PDE3A-201ENST00000359062 KRTAP19-4Q3LI73 84 aa5.46□□□□□ -1.53
PDE3A-201ENST00000359062 KRTAP12-4P60329 112 aa5.46□□□□□ -1.54
PDE3A-201ENST00000359062 SACSQ9NZJ4 4579 aa5.44□□□□□ -1.54
PDE3A-201ENST00000359062 APOBP04114 4563 aaKnown RBP5.44□□□□□ -1.54
PDE3A-201ENST00000359062 SPRR5A0A1B0GTR4 108 aa5.43□□□□□ -1.54
PDE3A-201ENST00000359062 LCE2BO14633 110 aa5.43□□□□□ -1.54
PDE3A-201ENST00000359062 MT1XP80297 61 aa5.38□□□□□ -1.55
PDE3A-201ENST00000359062 PKD1P98161 4303 aa5.38□□□□□ -1.55
PDE3A-201ENST00000359062 KRTAP19-1Q8IUB9 90 aa5.37□□□□□ -1.55
PDE3A-201ENST00000359062 KRTAP19-8Q3LI54 63 aa5.36□□□□□ -1.55
PDE3A-201ENST00000359062 FLGP20930 4061 aaPredicted RBP5.35□□□□□ -1.55
PDE3A-201ENST00000359062 DYNC1H1Q14204 4646 aaKnown RBP5.33□□□□□ -1.56
PDE3A-201ENST00000359062 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
PDE3A-201ENST00000359062 KRTAP4-8Q9BYQ9 185 aa5.29□□□□□ -1.56
PDE3A-201ENST00000359062 PKHD1L1Q86WI1 4243 aa5.29□□□□□ -1.56
PDE3A-201ENST00000359062 FAT3Q8TDW7 4589 aa5.27□□□□□ -1.57
PDE3A-201ENST00000359062 LCE3DQ9BYE3 92 aa5.25□□□□□ -1.57
PDE3A-201ENST00000359062 PKHD1P08F94 4074 aa5.23□□□□□ -1.57
PDE3A-201ENST00000359062 MT1BP07438 61 aa5.2□□□□□ -1.58
PDE3A-201ENST00000359062 LPAP08519 4548 aa5.18□□□□□ -1.58
PDE3A-201ENST00000359062 KRTAP9-8Q9BYQ0 159 aa5.17□□□□□ -1.58
PDE3A-201ENST00000359062 HSPG2P98160 4391 aa5.17□□□□□ -1.58
PDE3A-201ENST00000359062 LRP1Q07954 4544 aaKnown RBP5.15□□□□□ -1.58
PDE3A-201ENST00000359062 KRTAP17-1Q9BYP8 105 aa5.15□□□□□ -1.59
PDE3A-201ENST00000359062 TNXBP22105 4242 aa5.15□□□□□ -1.59
PDE3A-201ENST00000359062 LCE3EQ5T5B0 92 aa5.12□□□□□ -1.59
PDE3A-201ENST00000359062 MYCBP2O75592 4640 aa5.1□□□□□ -1.59
PDE3A-201ENST00000359062 MT4P47944 62 aa5.08□□□□□ -1.6
PDE3A-201ENST00000359062 LCE2CQ5TA81 110 aa5.07□□□□□ -1.6
PDE3A-201ENST00000359062 KRTAP9-3Q9BYQ3 159 aa5.04□□□□□ -1.6
PDE3A-201ENST00000359062 LCE2DQ5TA82 110 aaPredicted RBP5.03□□□□□ -1.6
PDE3A-201ENST00000359062 KRTAP4-7Q9BYR0 210 aa5.03□□□□□ -1.6
PDE3A-201ENST00000359062 RYR1P21817 5038 aa4.99□□□□□ -1.61
PDE3A-201ENST00000359062 KRTAP19-3Q7Z4W3 81 aa4.98□□□□□ -1.61
PDE3A-201ENST00000359062 DNHD1Q96M86 4753 aa4.96□□□□□ -1.62
PDE3A-201ENST00000359062 MT1LQ93083 61 aa4.91□□□□□ -1.62
PDE3A-201ENST00000359062 PRM1P04553 51 aa4.88□□□□□ -1.63
PDE3A-201ENST00000359062 MT1EP04732 61 aa4.85□□□□□ -1.63
PDE3A-201ENST00000359062 LOC100996750A0A140TA64 210 aa4.84□□□□□ -1.64
PDE3A-201ENST00000359062 RYR3Q15413 4870 aa4.78□□□□□ -1.64
PDE3A-201ENST00000359062 LCE1BQ5T7P3 118 aa4.78□□□□□ -1.64
PDE3A-201ENST00000359062 MT3P25713 68 aa4.75□□□□□ -1.65
PDE3A-201ENST00000359062 KRTAP9-2Q9BYQ4 174 aa4.74□□□□□ -1.65
PDE3A-201ENST00000359062 LRP2P98164 4655 aa4.74□□□□□ -1.65
PDE3A-201ENST00000359062 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
PDE3A-201ENST00000359062 MT1MQ8N339 61 aa4.73□□□□□ -1.65
PDE3A-201ENST00000359062 KRTAP4-3Q9BYR4 195 aa4.71□□□□□ -1.65
PDE3A-201ENST00000359062 MUC17Q685J3 4493 aa4.62□□□□□ -1.67
PDE3A-201ENST00000359062 KRTAP9-6A0A140TA67 174 aa4.58□□□□□ -1.68
PDE3A-201ENST00000359062 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
PDE3A-201ENST00000359062 HYDINQ4G0P3 5121 aa4.55□□□□□ -1.68
PDE3A-201ENST00000359062 KRTAP19-2Q3LHN2 52 aa4.54□□□□□ -1.68
PDE3A-201ENST00000359062 KRTAP20-1Q3LI63 56 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms