RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 PRAC1Q96KF2 57 aa13.01□□□□□ -0.33
HDGF-201ENST00000357325 H0YAA0 97 aa12.98□□□□□ -0.33
HDGF-201ENST00000357325 XP32Q5T750 250 aa12.95□□□□□ -0.34
HDGF-201ENST00000357325 RPL37P61927 97 aaKnown RBP12.93□□□□□ -0.34
HDGF-201ENST00000357325 MT1HL1P0DM35 61 aa12.87□□□□□ -0.35
HDGF-201ENST00000357325 EPPK1P58107 5090 aaKnown RBP12.87□□□□□ -0.35
HDGF-201ENST00000357325 A0A1B0GU33 70 aa12.87□□□□□ -0.35
HDGF-201ENST00000357325 LPAP08519 4548 aa12.86□□□□□ -0.35
HDGF-201ENST00000357325 H1FX-AS1Q4G0G2 97 aa12.83□□□□□ -0.36
HDGF-201ENST00000357325 KRTAP3-3Q9BYR6 98 aa12.81□□□□□ -0.36
HDGF-201ENST00000357325 LRP2P98164 4655 aa12.72□□□□□ -0.37
HDGF-201ENST00000357325 ABCA13Q86UQ4 5058 aa12.66□□□□□ -0.38
HDGF-201ENST00000357325 KRTAP10-6P60371 365 aaPredicted RBP12.64□□□□□ -0.39
HDGF-201ENST00000357325 S4R3F8 94 aa12.59□□□□□ -0.39
HDGF-201ENST00000357325 CSAG1Q6PB30 78 aa12.57□□□□□ -0.4
HDGF-201ENST00000357325 KRTAP3-2Q9BYR7 98 aa12.57□□□□□ -0.4
HDGF-201ENST00000357325 KRTAP13-4Q3LI77 160 aa12.55□□□□□ -0.4
HDGF-201ENST00000357325 KRTAP4-5Q9BYR2 181 aa12.55□□□□□ -0.4
HDGF-201ENST00000357325 P0C880 135 aa12.45□□□□□ -0.42
HDGF-201ENST00000357325 TPRXLQ17RH7 258 aa12.41□□□□□ -0.42
HDGF-201ENST00000357325 A0A0D9SG42 100 aa12.41□□□□□ -0.42
HDGF-201ENST00000357325 LINC01554Q52M75 96 aa12.34□□□□□ -0.43
HDGF-201ENST00000357325 CRIPTQ9P021 101 aa12.3□□□□□ -0.44
HDGF-201ENST00000357325 K7ERS5 55 aa12.26□□□□□ -0.45
HDGF-201ENST00000357325 KRTAP25-1Q3LHN0 102 aa12.18□□□□□ -0.46
HDGF-201ENST00000357325 MUC17Q685J3 4493 aa12.11□□□□□ -0.47
HDGF-201ENST00000357325 KRTAP12-2P59991 146 aa12.1□□□□□ -0.47
HDGF-201ENST00000357325 ROMO1P60602 79 aa12.08□□□□□ -0.48
HDGF-201ENST00000357325 HERC2O95714 4834 aa12.07□□□□□ -0.48
HDGF-201ENST00000357325 KRTAP4-1Q9BYQ7 146 aa12.05□□□□□ -0.48
HDGF-201ENST00000357325 KRTAP12-1P59990 96 aa11.97□□□□□ -0.49
HDGF-201ENST00000357325 SPINT4Q6UDR6 99 aa11.96□□□□□ -0.5
HDGF-201ENST00000357325 J3QL48 77 aa11.92□□□□□ -0.5
HDGF-201ENST00000357325 SEC61BP60468 96 aaKnown RBP11.91□□□□□ -0.5
HDGF-201ENST00000357325 MUC2Q02817 5179 aa11.87□□□□□ -0.51
HDGF-201ENST00000357325 C10orf95Q9H7T3 257 aa11.86□□□□□ -0.51
HDGF-201ENST00000357325 M0QZ58 72 aa11.83□□□□□ -0.52
HDGF-201ENST00000357325 LORP23490 312 aaPredicted RBP11.79□□□□□ -0.52
HDGF-201ENST00000357325 KRTAP19-2Q3LHN2 52 aa11.75□□□□□ -0.53
HDGF-201ENST00000357325 BIRC6Q9NR09 4857 aa11.68□□□□□ -0.54
HDGF-201ENST00000357325 R4GN34 69 aa11.68□□□□□ -0.54
HDGF-201ENST00000357325 HERC1Q15751 4861 aa11.59□□□□□ -0.55
HDGF-201ENST00000357325 PCLOQ9Y6V0 5065 aa11.53□□□□□ -0.56
HDGF-201ENST00000357325 H3BS24 57 aa11.52□□□□□ -0.57
HDGF-201ENST00000357325 FLGP20930 4061 aaPredicted RBP11.42□□□□□ -0.58
HDGF-201ENST00000357325 HMCN2Q8NDA2 5059 aa11.4□□□□□ -0.58
HDGF-201ENST00000357325 FAT4Q6V0I7 4981 aa11.29□□□□□ -0.6
HDGF-201ENST00000357325 KRTAP15-1Q3LI76 137 aa11.11□□□□□ -0.63
HDGF-201ENST00000357325 LCE2CQ5TA81 110 aa11.1□□□□□ -0.63
HDGF-201ENST00000357325 CAMK2N1Q7Z7J9 78 aa11.06□□□□□ -0.64
HDGF-201ENST00000357325 RNF213Q63HN8 5207 aa11.05□□□□□ -0.64
HDGF-201ENST00000357325 UBR4Q5T4S7 5183 aa11.02□□□□□ -0.65
HDGF-201ENST00000357325 NDUFAF8A1L188 74 aa10.79□□□□□ -0.68
HDGF-201ENST00000357325 MT1HP80294 61 aa10.78□□□□□ -0.68
HDGF-201ENST00000357325 M0R2T5 61 aa10.77□□□□□ -0.69
HDGF-201ENST00000357325 KRTAP19-1Q8IUB9 90 aa10.74□□□□□ -0.69
HDGF-201ENST00000357325 PLAC4Q8WY50 150 aa10.69□□□□□ -0.7
HDGF-201ENST00000357325 SPRR2GQ9BYE4 73 aa10.68□□□□□ -0.7
HDGF-201ENST00000357325 MT1FP04733 61 aa10.61□□□□□ -0.71
HDGF-201ENST00000357325 PP632Q6XCG6 107 aa10.61□□□□□ -0.71
HDGF-201ENST00000357325 MT2AP02795 61 aa10.58□□□□□ -0.72
HDGF-201ENST00000357325 TNP1P09430 55 aa10.58□□□□□ -0.72
HDGF-201ENST00000357325 KRTAP10-10P60014 251 aa10.53□□□□□ -0.72
HDGF-201ENST00000357325 KRTAP9-8Q9BYQ0 159 aa10.53□□□□□ -0.72
HDGF-201ENST00000357325 KRTAP23-1A1A580 65 aa10.28□□□□□ -0.76
HDGF-201ENST00000357325 KRTAP19-8Q3LI54 63 aa10.22□□□□□ -0.77
HDGF-201ENST00000357325 MT1BP07438 61 aa10.21□□□□□ -0.78
HDGF-201ENST00000357325 LCE3AQ5TA76 89 aa10.19□□□□□ -0.78
HDGF-201ENST00000357325 KRTAP10-5P60370 271 aa10.11□□□□□ -0.79
HDGF-201ENST00000357325 MT1XP80297 61 aa10.09□□□□□ -0.79
HDGF-201ENST00000357325 KRTAP9-3Q9BYQ3 159 aa10.07□□□□□ -0.8
HDGF-201ENST00000357325 LUZP6Q538Z0 58 aa10.03□□□□□ -0.8
HDGF-201ENST00000357325 SPRR5A0A1B0GTR4 108 aa9.96□□□□□ -0.81
HDGF-201ENST00000357325 KRTAP10-7P60409 375 aaPredicted RBP9.86□□□□□ -0.83
HDGF-201ENST00000357325 USH2AO75445 5202 aa9.84□□□□□ -0.83
HDGF-201ENST00000357325 KRTAP8-1Q8IUC2 63 aa9.83□□□□□ -0.84
HDGF-201ENST00000357325 KRTAP10-12P60413 245 aa9.78□□□□□ -0.84
HDGF-201ENST00000357325 LCE2BO14633 110 aa9.76□□□□□ -0.85
HDGF-201ENST00000357325 KRTAP12-3P60328 96 aa9.65□□□□□ -0.87
HDGF-201ENST00000357325 LCE2AQ5TA79 106 aaPredicted RBP9.6□□□□□ -0.87
HDGF-201ENST00000357325 KMT2DO14686 5537 aa9.6□□□□□ -0.87
HDGF-201ENST00000357325 A0A0A0MQY5 61 aa9.58□□□□□ -0.88
HDGF-201ENST00000357325 PRO2289Q9P1D8 64 aa9.55□□□□□ -0.88
HDGF-201ENST00000357325 KRTAP19-5Q3LI72 72 aa9.38□□□□□ -0.91
HDGF-201ENST00000357325 KRTAP4-8A0A0G2JLE6 195 aa9.35□□□□□ -0.91
HDGF-201ENST00000357325 KRTAP4-8Q9BYQ9 185 aa9.35□□□□□ -0.91
HDGF-201ENST00000357325 LCE3CQ5T5A8 94 aa9.07□□□□□ -0.96
HDGF-201ENST00000357325 SSPOA2VEC9 5147 aa9.04□□□□□ -0.96
HDGF-201ENST00000357325 FSIP2Q5CZC0 6907 aa9.02□□□□□ -0.97
HDGF-201ENST00000357325 KRTAP19-7Q3SYF9 63 aa9.01□□□□□ -0.97
HDGF-201ENST00000357325 KRTAP4-7Q9BYR0 210 aa8.91□□□□□ -0.98
HDGF-201ENST00000357325 KRTAP9-6A8MVA2 160 aa8.88□□□□□ -0.99
HDGF-201ENST00000357325 MT1EP04732 61 aa8.72□□□□□ -1.01
HDGF-201ENST00000357325 MT1LQ93083 61 aa8.7□□□□□ -1.02
HDGF-201ENST00000357325 KRTAP19-6Q3LI70 58 aa8.67□□□□□ -1.02
HDGF-201ENST00000357325 FCGBPQ9Y6R7 5405 aaPredicted RBP8.56□□□□□ -1.04
HDGF-201ENST00000357325 INE1O15225 51 aa8.48□□□□□ -1.05
HDGF-201ENST00000357325 MUC12Q9UKN1 5478 aa8.46□□□□□ -1.06
HDGF-201ENST00000357325 KRTAP4-3Q9BYR4 195 aa8.4□□□□□ -1.07
HDGF-201ENST00000357325 LCE2DQ5TA82 110 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms