RNA–Protein interactions for RNA: ENST00000356208.9

RBM38-203, Transcript of RNA binding motif protein 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM38, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-203ENST00000356208 TPRXLQ17RH7 258 aa11.46□□□□□ -0.58
RBM38-203ENST00000356208 PCLOQ9Y6V0 5065 aa11.43□□□□□ -0.58
RBM38-203ENST00000356208 ACYP2P14621 99 aa11.42□□□□□ -0.58
RBM38-203ENST00000356208 LPAP08519 4548 aa11.39□□□□□ -0.59
RBM38-203ENST00000356208 LRP2P98164 4655 aa11.34□□□□□ -0.59
RBM38-203ENST00000356208 RBM12B-AS1Q9P1G2 102 aa11.33□□□□□ -0.6
RBM38-203ENST00000356208 KRTAP3-1Q9BYR8 98 aa11.25□□□□□ -0.61
RBM38-203ENST00000356208 HERC1Q15751 4861 aa11.22□□□□□ -0.61
RBM38-203ENST00000356208 COX6B2Q6YFQ2 88 aa11.18□□□□□ -0.62
RBM38-203ENST00000356208 A0A1B0GU69 56 aa11.14□□□□□ -0.63
RBM38-203ENST00000356208 PRAC1Q96KF2 57 aa11.09□□□□□ -0.63
RBM38-203ENST00000356208 ADM2Q7Z4H4 148 aa11.08□□□□□ -0.64
RBM38-203ENST00000356208 SEC61BP60468 96 aaKnown RBP11.04□□□□□ -0.64
RBM38-203ENST00000356208 SPATA8Q6RVD6 105 aa11.01□□□□□ -0.65
RBM38-203ENST00000356208 MIR22HGQ0VDD5 57 aa10.97□□□□□ -0.65
RBM38-203ENST00000356208 UQCR11O14957 56 aa10.94□□□□□ -0.66
RBM38-203ENST00000356208 KRTAP4-1Q9BYQ7 146 aa10.9□□□□□ -0.66
RBM38-203ENST00000356208 HMCN2Q8NDA2 5059 aa10.9□□□□□ -0.66
RBM38-203ENST00000356208 MUC17Q685J3 4493 aa10.87□□□□□ -0.67
RBM38-203ENST00000356208 H1FX-AS1Q4G0G2 97 aa10.85□□□□□ -0.67
RBM38-203ENST00000356208 KRTAP3-3Q9BYR6 98 aa10.84□□□□□ -0.67
RBM38-203ENST00000356208 S4R3F8 94 aa10.83□□□□□ -0.68
RBM38-203ENST00000356208 MUC2Q02817 5179 aa10.77□□□□□ -0.69
RBM38-203ENST00000356208 LINC01554Q52M75 96 aa10.68□□□□□ -0.7
RBM38-203ENST00000356208 CSAG1Q6PB30 78 aa10.68□□□□□ -0.7
RBM38-203ENST00000356208 H0YAA0 97 aa10.63□□□□□ -0.71
RBM38-203ENST00000356208 KRTAP19-2Q3LHN2 52 aa10.61□□□□□ -0.71
RBM38-203ENST00000356208 UBR4Q5T4S7 5183 aa10.58□□□□□ -0.72
RBM38-203ENST00000356208 KRTAP10-6P60371 365 aaPredicted RBP10.5□□□□□ -0.73
RBM38-203ENST00000356208 RNF213Q63HN8 5207 aa10.49□□□□□ -0.73
RBM38-203ENST00000356208 A0A1B0GU33 70 aa10.49□□□□□ -0.73
RBM38-203ENST00000356208 KRTAP3-2Q9BYR7 98 aa10.49□□□□□ -0.73
RBM38-203ENST00000356208 P0C880 135 aa10.41□□□□□ -0.74
RBM38-203ENST00000356208 FLGP20930 4061 aaPredicted RBP10.34□□□□□ -0.75
RBM38-203ENST00000356208 KRTAP25-1Q3LHN0 102 aa10.3□□□□□ -0.76
RBM38-203ENST00000356208 FAT4Q6V0I7 4981 aa10.29□□□□□ -0.76
RBM38-203ENST00000356208 LCE2CQ5TA81 110 aa10.28□□□□□ -0.76
RBM38-203ENST00000356208 KRTAP13-4Q3LI77 160 aa10.28□□□□□ -0.76
RBM38-203ENST00000356208 CRIPTQ9P021 101 aa10.26□□□□□ -0.77
RBM38-203ENST00000356208 A0A0D9SG42 100 aa10.1□□□□□ -0.79
RBM38-203ENST00000356208 H3BS24 57 aa10.1□□□□□ -0.79
RBM38-203ENST00000356208 K7ERS5 55 aa10.1□□□□□ -0.79
RBM38-203ENST00000356208 LORP23490 312 aaPredicted RBP10.07□□□□□ -0.8
RBM38-203ENST00000356208 M0QZ58 72 aa10.06□□□□□ -0.8
RBM38-203ENST00000356208 MT1HP80294 61 aa10.06□□□□□ -0.8
RBM38-203ENST00000356208 ROMO1P60602 79 aa10.04□□□□□ -0.8
RBM38-203ENST00000356208 R4GN34 69 aa10.01□□□□□ -0.81
RBM38-203ENST00000356208 M0R2T5 61 aa9.99□□□□□ -0.81
RBM38-203ENST00000356208 KRTAP12-2P59991 146 aa9.87□□□□□ -0.83
RBM38-203ENST00000356208 KRTAP12-1P59990 96 aa9.86□□□□□ -0.83
RBM38-203ENST00000356208 SPINT4Q6UDR6 99 aa9.83□□□□□ -0.84
RBM38-203ENST00000356208 C10orf95Q9H7T3 257 aa9.83□□□□□ -0.84
RBM38-203ENST00000356208 KRTAP9-8Q9BYQ0 159 aa9.72□□□□□ -0.85
RBM38-203ENST00000356208 MT2AP02795 61 aa9.71□□□□□ -0.86
RBM38-203ENST00000356208 MT1FP04733 61 aa9.67□□□□□ -0.86
RBM38-203ENST00000356208 KRTAP10-10P60014 251 aa9.64□□□□□ -0.87
RBM38-203ENST00000356208 KRTAP19-1Q8IUB9 90 aa9.58□□□□□ -0.88
RBM38-203ENST00000356208 SPRR2GQ9BYE4 73 aa9.57□□□□□ -0.88
RBM38-203ENST00000356208 LCE2AQ5TA79 106 aaPredicted RBP9.5□□□□□ -0.89
RBM38-203ENST00000356208 KRTAP15-1Q3LI76 137 aa9.46□□□□□ -0.89
RBM38-203ENST00000356208 CAMK2N1Q7Z7J9 78 aa9.4□□□□□ -0.9
RBM38-203ENST00000356208 NDUFAF8A1L188 74 aa9.36□□□□□ -0.91
RBM38-203ENST00000356208 KRTAP9-3Q9BYQ3 159 aa9.34□□□□□ -0.91
RBM38-203ENST00000356208 PLAC4Q8WY50 150 aa9.29□□□□□ -0.92
RBM38-203ENST00000356208 KRTAP19-8Q3LI54 63 aa9.28□□□□□ -0.92
RBM38-203ENST00000356208 MT1BP07438 61 aa9.19□□□□□ -0.94
RBM38-203ENST00000356208 LCE2BO14633 110 aa9.08□□□□□ -0.96
RBM38-203ENST00000356208 USH2AO75445 5202 aa9□□□□□ -0.97
RBM38-203ENST00000356208 TNP1P09430 55 aa8.94□□□□□ -0.98
RBM38-203ENST00000356208 MT1XP80297 61 aa8.94□□□□□ -0.98
RBM38-203ENST00000356208 KRTAP10-5P60370 271 aa8.94□□□□□ -0.98
RBM38-203ENST00000356208 A0A0A0MQY5 61 aa8.92□□□□□ -0.98
RBM38-203ENST00000356208 FSIP2Q5CZC0 6907 aa8.82□□□□□ -1
RBM38-203ENST00000356208 PP632Q6XCG6 107 aa8.75□□□□□ -1.01
RBM38-203ENST00000356208 PRO2289Q9P1D8 64 aa8.75□□□□□ -1.01
RBM38-203ENST00000356208 KRTAP23-1A1A580 65 aa8.66□□□□□ -1.02
RBM38-203ENST00000356208 KRTAP10-7P60409 375 aaPredicted RBP8.63□□□□□ -1.03
RBM38-203ENST00000356208 LCE3AQ5TA76 89 aa8.59□□□□□ -1.03
RBM38-203ENST00000356208 SSPOA2VEC9 5147 aa8.59□□□□□ -1.03
RBM38-203ENST00000356208 KRTAP10-12P60413 245 aa8.54□□□□□ -1.04
RBM38-203ENST00000356208 LUZP6Q538Z0 58 aa8.5□□□□□ -1.05
RBM38-203ENST00000356208 LCE2DQ5TA82 110 aaPredicted RBP8.49□□□□□ -1.05
RBM38-203ENST00000356208 KRTAP19-6Q3LI70 58 aa8.41□□□□□ -1.06
RBM38-203ENST00000356208 KRTAP8-1Q8IUC2 63 aa8.37□□□□□ -1.07
RBM38-203ENST00000356208 KMT2DO14686 5537 aa8.35□□□□□ -1.07
RBM38-203ENST00000356208 KRTAP9-2Q9BYQ4 174 aa8.29□□□□□ -1.08
RBM38-203ENST00000356208 KRTAP4-8A0A0G2JLE6 195 aa8.26□□□□□ -1.09
RBM38-203ENST00000356208 KRTAP4-8Q9BYQ9 185 aa8.26□□□□□ -1.09
RBM38-203ENST00000356208 SPRR5A0A1B0GTR4 108 aa8.25□□□□□ -1.09
RBM38-203ENST00000356208 KRTAP12-3P60328 96 aa8.22□□□□□ -1.09
RBM38-203ENST00000356208 FCGBPQ9Y6R7 5405 aaPredicted RBP8.19□□□□□ -1.1
RBM38-203ENST00000356208 KRTAP19-5Q3LI72 72 aa8.13□□□□□ -1.11
RBM38-203ENST00000356208 KRTAP19-7Q3SYF9 63 aa7.98□□□□□ -1.13
RBM38-203ENST00000356208 CRCT1Q9UGL9 99 aa7.96□□□□□ -1.13
RBM38-203ENST00000356208 MACF1Q9UPN3 7388 aaKnown RBP7.87□□□□□ -1.15
RBM38-203ENST00000356208 MT1EP04732 61 aa7.81□□□□□ -1.16
RBM38-203ENST00000356208 SYNE2Q8WXH0 6885 aaKnown RBP7.74□□□□□ -1.17
RBM38-203ENST00000356208 LCE3CQ5T5A8 94 aa7.69□□□□□ -1.18
RBM38-203ENST00000356208 MT1LQ93083 61 aa7.68□□□□□ -1.18
RBM38-203ENST00000356208 MUC12Q9UKN1 5478 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms