RNA–Protein interactions for RNA: ENST00000356205.8

SLC39A1-202, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-202ENST00000356205 SPATA8Q6RVD6 105 aa8.85□□□□□ -0.99
SLC39A1-202ENST00000356205 C20orf166-AS1Q96NR2 134 aa8.84□□□□□ -0.99
SLC39A1-202ENST00000356205 A8MUU9 505 aa8.82□□□□□ -1
SLC39A1-202ENST00000356205 RBM12B-AS1Q9P1G2 102 aa8.81□□□□□ -1
SLC39A1-202ENST00000356205 UQCR11O14957 56 aa8.77□□□□□ -1
SLC39A1-202ENST00000356205 TPRXLQ17RH7 258 aa8.74□□□□□ -1.01
SLC39A1-202ENST00000356205 XP32Q5T750 250 aa8.73□□□□□ -1.01
SLC39A1-202ENST00000356205 MIR22HGQ0VDD5 57 aa8.73□□□□□ -1.01
SLC39A1-202ENST00000356205 HMCN2Q8NDA2 5059 aa8.7□□□□□ -1.02
SLC39A1-202ENST00000356205 RPL37P61927 97 aaKnown RBP8.69□□□□□ -1.02
SLC39A1-202ENST00000356205 LPAP08519 4548 aa8.57□□□□□ -1.04
SLC39A1-202ENST00000356205 PRAC1Q96KF2 57 aa8.51□□□□□ -1.05
SLC39A1-202ENST00000356205 KRTAP3-1Q9BYR8 98 aa8.5□□□□□ -1.05
SLC39A1-202ENST00000356205 LRP2P98164 4655 aa8.5□□□□□ -1.05
SLC39A1-202ENST00000356205 ADM2Q7Z4H4 148 aa8.5□□□□□ -1.05
SLC39A1-202ENST00000356205 UBR4Q5T4S7 5183 aa8.48□□□□□ -1.05
SLC39A1-202ENST00000356205 H0YAA0 97 aa8.44□□□□□ -1.06
SLC39A1-202ENST00000356205 SEC61BP60468 96 aaKnown RBP8.44□□□□□ -1.06
SLC39A1-202ENST00000356205 COX6B2Q6YFQ2 88 aa8.39□□□□□ -1.07
SLC39A1-202ENST00000356205 A0A1B0GU33 70 aa8.39□□□□□ -1.07
SLC39A1-202ENST00000356205 LINC01554Q52M75 96 aa8.38□□□□□ -1.07
SLC39A1-202ENST00000356205 H1FX-AS1Q4G0G2 97 aa8.38□□□□□ -1.07
SLC39A1-202ENST00000356205 MUC17Q685J3 4493 aa8.37□□□□□ -1.07
SLC39A1-202ENST00000356205 CSAG1Q6PB30 78 aa8.31□□□□□ -1.08
SLC39A1-202ENST00000356205 RNF213Q63HN8 5207 aa8.29□□□□□ -1.08
SLC39A1-202ENST00000356205 KRTAP4-1Q9BYQ7 146 aa8.22□□□□□ -1.09
SLC39A1-202ENST00000356205 K7ERS5 55 aa8.16□□□□□ -1.1
SLC39A1-202ENST00000356205 KRTAP3-3Q9BYR6 98 aa8.16□□□□□ -1.1
SLC39A1-202ENST00000356205 KRTAP25-1Q3LHN0 102 aa8.15□□□□□ -1.1
SLC39A1-202ENST00000356205 MUC2Q02817 5179 aa8.14□□□□□ -1.11
SLC39A1-202ENST00000356205 KRTAP10-6P60371 365 aaPredicted RBP8.13□□□□□ -1.11
SLC39A1-202ENST00000356205 S4R3F8 94 aa8.07□□□□□ -1.12
SLC39A1-202ENST00000356205 KRTAP3-2Q9BYR7 98 aa8.06□□□□□ -1.12
SLC39A1-202ENST00000356205 KRTAP19-2Q3LHN2 52 aa8.01□□□□□ -1.13
SLC39A1-202ENST00000356205 ROMO1P60602 79 aa7.99□□□□□ -1.13
SLC39A1-202ENST00000356205 KRTAP13-4Q3LI77 160 aa7.99□□□□□ -1.13
SLC39A1-202ENST00000356205 P0C880 135 aa7.88□□□□□ -1.15
SLC39A1-202ENST00000356205 FLGP20930 4061 aaPredicted RBP7.86□□□□□ -1.15
SLC39A1-202ENST00000356205 FAT4Q6V0I7 4981 aa7.86□□□□□ -1.15
SLC39A1-202ENST00000356205 A0A0D9SG42 100 aa7.83□□□□□ -1.16
SLC39A1-202ENST00000356205 LCE2CQ5TA81 110 aa7.82□□□□□ -1.16
SLC39A1-202ENST00000356205 CRIPTQ9P021 101 aa7.79□□□□□ -1.16
SLC39A1-202ENST00000356205 M0QZ58 72 aa7.75□□□□□ -1.17
SLC39A1-202ENST00000356205 KRTAP12-2P59991 146 aa7.74□□□□□ -1.17
SLC39A1-202ENST00000356205 KRTAP12-1P59990 96 aa7.73□□□□□ -1.17
SLC39A1-202ENST00000356205 MT1HP80294 61 aa7.68□□□□□ -1.18
SLC39A1-202ENST00000356205 LCE2AQ5TA79 106 aaPredicted RBP7.68□□□□□ -1.18
SLC39A1-202ENST00000356205 H3BS24 57 aa7.63□□□□□ -1.19
SLC39A1-202ENST00000356205 M0R2T5 61 aa7.61□□□□□ -1.19
SLC39A1-202ENST00000356205 SPINT4Q6UDR6 99 aa7.6□□□□□ -1.19
SLC39A1-202ENST00000356205 C10orf95Q9H7T3 257 aa7.59□□□□□ -1.19
SLC39A1-202ENST00000356205 KRTAP15-1Q3LI76 137 aa7.47□□□□□ -1.21
SLC39A1-202ENST00000356205 LORP23490 312 aaPredicted RBP7.43□□□□□ -1.22
SLC39A1-202ENST00000356205 R4GN34 69 aa7.43□□□□□ -1.22
SLC39A1-202ENST00000356205 KRTAP9-8Q9BYQ0 159 aa7.39□□□□□ -1.23
SLC39A1-202ENST00000356205 MT2AP02795 61 aa7.37□□□□□ -1.23
SLC39A1-202ENST00000356205 MT1FP04733 61 aa7.33□□□□□ -1.24
SLC39A1-202ENST00000356205 KRTAP10-10P60014 251 aa7.31□□□□□ -1.24
SLC39A1-202ENST00000356205 KRTAP9-2Q9BYQ4 174 aa7.29□□□□□ -1.24
SLC39A1-202ENST00000356205 SPRR2GQ9BYE4 73 aa7.23□□□□□ -1.25
SLC39A1-202ENST00000356205 KRTAP19-1Q8IUB9 90 aa7.2□□□□□ -1.26
SLC39A1-202ENST00000356205 NDUFAF8A1L188 74 aa7.18□□□□□ -1.26
SLC39A1-202ENST00000356205 LCE2DQ5TA82 110 aaPredicted RBP7.16□□□□□ -1.26
SLC39A1-202ENST00000356205 PP632Q6XCG6 107 aa7.14□□□□□ -1.27
SLC39A1-202ENST00000356205 KRTAP9-3Q9BYQ3 159 aa7.12□□□□□ -1.27
SLC39A1-202ENST00000356205 FSIP2Q5CZC0 6907 aa7.08□□□□□ -1.28
SLC39A1-202ENST00000356205 PLAC4Q8WY50 150 aa7.07□□□□□ -1.28
SLC39A1-202ENST00000356205 KRTAP19-8Q3LI54 63 aa7.04□□□□□ -1.28
SLC39A1-202ENST00000356205 CAMK2N1Q7Z7J9 78 aa7.04□□□□□ -1.28
SLC39A1-202ENST00000356205 KRTAP23-1A1A580 65 aa6.97□□□□□ -1.29
SLC39A1-202ENST00000356205 KRTAP9-6A0A140TA67 174 aa6.96□□□□□ -1.29
SLC39A1-202ENST00000356205 MT1BP07438 61 aa6.94□□□□□ -1.3
SLC39A1-202ENST00000356205 LCE2BO14633 110 aa6.92□□□□□ -1.3
SLC39A1-202ENST00000356205 CRCT1Q9UGL9 99 aa6.91□□□□□ -1.3
SLC39A1-202ENST00000356205 USH2AO75445 5202 aa6.9□□□□□ -1.3
SLC39A1-202ENST00000356205 TNP1P09430 55 aa6.86□□□□□ -1.31
SLC39A1-202ENST00000356205 SSPOA2VEC9 5147 aa6.81□□□□□ -1.32
SLC39A1-202ENST00000356205 LUZP6Q538Z0 58 aa6.75□□□□□ -1.33
SLC39A1-202ENST00000356205 SPRR5A0A1B0GTR4 108 aa6.72□□□□□ -1.33
SLC39A1-202ENST00000356205 MT1XP80297 61 aa6.72□□□□□ -1.33
SLC39A1-202ENST00000356205 KRTAP10-5P60370 271 aa6.7□□□□□ -1.34
SLC39A1-202ENST00000356205 PRO2289Q9P1D8 64 aa6.66□□□□□ -1.34
SLC39A1-202ENST00000356205 FCGBPQ9Y6R7 5405 aaPredicted RBP6.61□□□□□ -1.35
SLC39A1-202ENST00000356205 KRTAP19-6Q3LI70 58 aa6.53□□□□□ -1.36
SLC39A1-202ENST00000356205 A0A0A0MQY5 61 aa6.48□□□□□ -1.37
SLC39A1-202ENST00000356205 LCE3AQ5TA76 89 aa6.45□□□□□ -1.38
SLC39A1-202ENST00000356205 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.44□□□□□ -1.38
SLC39A1-202ENST00000356205 KRTAP10-7P60409 375 aaPredicted RBP6.44□□□□□ -1.38
SLC39A1-202ENST00000356205 KRTAP8-1Q8IUC2 63 aa6.41□□□□□ -1.38
SLC39A1-202ENST00000356205 KRTAP10-12P60413 245 aa6.39□□□□□ -1.39
SLC39A1-202ENST00000356205 MACF1Q9UPN3 7388 aaKnown RBP6.35□□□□□ -1.39
SLC39A1-202ENST00000356205 KRTAP9-7A8MTY7 169 aa6.29□□□□□ -1.4
SLC39A1-202ENST00000356205 SYNE2Q8WXH0 6885 aaKnown RBP6.25□□□□□ -1.41
SLC39A1-202ENST00000356205 KRTAP4-8A0A0G2JLE6 195 aa6.17□□□□□ -1.42
SLC39A1-202ENST00000356205 KRTAP12-3P60328 96 aa6.17□□□□□ -1.42
SLC39A1-202ENST00000356205 KRTAP4-8Q9BYQ9 185 aa6.17□□□□□ -1.42
SLC39A1-202ENST00000356205 KMT2DO14686 5537 aa6.17□□□□□ -1.42
SLC39A1-202ENST00000356205 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
SLC39A1-202ENST00000356205 KRTAP6-3Q3LI67 103 aa6.05□□□□□ -1.44
SLC39A1-202ENST00000356205 KRTAP19-7Q3SYF9 63 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms