RNA–Protein interactions for RNA: ENST00000356205.8

SLC39A1-202, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-202ENST00000356205 NISCHQ9Y2I1 1504 aa36.99■■■■□ 3.51
SLC39A1-202ENST00000356205 CCDC180Q9P1Z9 1646 aa32.34■■■□□ 2.77
SLC39A1-202ENST00000356205 ZCCHC6Q5VYS8 1495 aaKnown RBP31.08■■■□□ 2.57
SLC39A1-202ENST00000356205 ABCC9O60706 1549 aa30.65■■■□□ 2.5
SLC39A1-202ENST00000356205 DCAF1Q9Y4B6 1507 aa30.63■■■□□ 2.49
SLC39A1-202ENST00000356205 DCAF8L2P0C7V8 631 aa30.46■■■□□ 2.47
SLC39A1-202ENST00000356205 MYO15BQ96JP2 1530 aa30.31■■■□□ 2.44
SLC39A1-202ENST00000356205 NACADO15069 1562 aa30.13■■■□□ 2.41
SLC39A1-202ENST00000356205 SHROOM4Q9ULL8 1493 aa30.03■■■□□ 2.4
SLC39A1-202ENST00000356205 RB1CC1Q8TDY2 1594 aa29.89■■■□□ 2.38
SLC39A1-202ENST00000356205 SCRIBQ14160 1630 aa29.68■■■□□ 2.34
SLC39A1-202ENST00000356205 UNC13AQ9UPW8 1703 aa29.23■■■□□ 2.27
SLC39A1-202ENST00000356205 BICRAQ9NZM4 1560 aa28.97■■■□□ 2.23
SLC39A1-202ENST00000356205 SUPT5HO00267 1087 aaKnown RBP28.82■■■□□ 2.2
SLC39A1-202ENST00000356205 PABPN1Q86U42 306 aaKnown RBP eCLIP28.79■■■□□ 2.2
SLC39A1-202ENST00000356205 CECR2Q9BXF3 1484 aa28.71■■■□□ 2.19
SLC39A1-202ENST00000356205 RSF1Q96T23 1441 aaPredicted RBP28.64■■■□□ 2.18
SLC39A1-202ENST00000356205 BAZ1AQ9NRL2 1556 aaPredicted RBP28.59■■■□□ 2.17
SLC39A1-202ENST00000356205 MROH2BQ7Z745 1585 aa28.55■■■□□ 2.16
SLC39A1-202ENST00000356205 SMARCA4P51532 1647 aa28.46■■■□□ 2.15
SLC39A1-202ENST00000356205 WIZO95785 1651 aa28.3■■■□□ 2.12
SLC39A1-202ENST00000356205 PEG3Q9GZU2 1588 aa28.14■■■□□ 2.1
SLC39A1-202ENST00000356205 EIF4G1Q04637 1599 aaKnown RBP28.11■■■□□ 2.09
SLC39A1-202ENST00000356205 DNAJC5BQ9UF47 199 aa28.11■■■□□ 2.09
SLC39A1-202ENST00000356205 TOP2AP11388 1531 aaKnown RBP28.06■■■□□ 2.08
SLC39A1-202ENST00000356205 SMARCA2P51531 1590 aa28.02■■■□□ 2.08
SLC39A1-202ENST00000356205 ATAD2BQ9ULI0 1458 aa28.01■■■□□ 2.07
SLC39A1-202ENST00000356205 BAZ1BQ9UIG0 1483 aaKnown RBP27.85■■■□□ 2.05
SLC39A1-202ENST00000356205 NCAPD3P42695 1498 aa27.79■■■□□ 2.04
SLC39A1-202ENST00000356205 HMGXB3Q12766 1538 aa27.78■■■□□ 2.04
SLC39A1-202ENST00000356205 CC2D2AQ9P2K1 1620 aa27.73■■■□□ 2.03
SLC39A1-202ENST00000356205 CCDC88BA6NC98 1476 aa27.73■■■□□ 2.03
SLC39A1-202ENST00000356205 CHIC1Q5VXU3 224 aa27.56■■■□□ 2
SLC39A1-202ENST00000356205 CFTRP13569 1480 aa27.15■■□□□ 1.94
SLC39A1-202ENST00000356205 TRIM41Q8WV44 630 aa27.13■■□□□ 1.93
SLC39A1-202ENST00000356205 ABCC8Q09428 1581 aa27.1■■□□□ 1.93
SLC39A1-202ENST00000356205 CADPSQ9ULU8 1353 aa27.06■■□□□ 1.92
SLC39A1-202ENST00000356205 PRDM2Q13029 1718 aa27.01■■□□□ 1.91
SLC39A1-202ENST00000356205 WRNQ14191 1432 aaPredicted RBP eCLIP26.97■■□□□ 1.91
SLC39A1-202ENST00000356205 LAMC3Q9Y6N6 1575 aa26.88■■□□□ 1.89
SLC39A1-202ENST00000356205 SYNJ1O43426 1573 aa26.87■■□□□ 1.89
SLC39A1-202ENST00000356205 NESP48681 1621 aa26.82■■□□□ 1.88
SLC39A1-202ENST00000356205 TOP2BQ02880 1626 aa26.78■■□□□ 1.88
SLC39A1-202ENST00000356205 FANCD2Q9BXW9 1451 aa26.77■■□□□ 1.88
SLC39A1-202ENST00000356205 BIVM-ERCC5R4GMW8 1640 aa26.76■■□□□ 1.87
SLC39A1-202ENST00000356205 CUX1P39880 1505 aa26.72■■□□□ 1.87
SLC39A1-202ENST00000356205 PDS5BQ9NTI5 1447 aa26.66■■□□□ 1.86
SLC39A1-202ENST00000356205 CEP164Q9UPV0 1460 aa26.63■■□□□ 1.85
SLC39A1-202ENST00000356205 FAM9AQ8IZU1 332 aaPredicted RBP26.6■■□□□ 1.85
SLC39A1-202ENST00000356205 SOGA1O94964 1423 aa26.57■■□□□ 1.84
SLC39A1-202ENST00000356205 EEA1Q15075 1411 aa26.57■■□□□ 1.84
SLC39A1-202ENST00000356205 DNMBPQ6XZF7 1577 aa26.53■■□□□ 1.84
SLC39A1-202ENST00000356205 KIF21AQ7Z4S6 1674 aa26.52■■□□□ 1.84
SLC39A1-202ENST00000356205 TOPBP1Q92547 1522 aa26.47■■□□□ 1.83
SLC39A1-202ENST00000356205 RUSC2Q8N2Y8 1516 aa26.46■■□□□ 1.83
SLC39A1-202ENST00000356205 LOC105371045A0A1W2PR82 267 aa26.45■■□□□ 1.83
SLC39A1-202ENST00000356205 FGD5Q6ZNL6 1462 aa26.45■■□□□ 1.82
SLC39A1-202ENST00000356205 URB2Q14146 1524 aaKnown RBP26.44■■□□□ 1.82
SLC39A1-202ENST00000356205 ERCC6Q03468 1493 aa26.37■■□□□ 1.81
SLC39A1-202ENST00000356205 CSRNP3Q8WYN3 585 aa26.35■■□□□ 1.81
SLC39A1-202ENST00000356205 MRC2Q9UBG0 1479 aa26.34■■□□□ 1.81
SLC39A1-202ENST00000356205 POLA1P09884 1462 aaPredicted RBP26.33■■□□□ 1.81
SLC39A1-202ENST00000356205 KIF27Q86VH2 1401 aa26.31■■□□□ 1.8
SLC39A1-202ENST00000356205 CUX2O14529 1486 aa26.25■■□□□ 1.79
SLC39A1-202ENST00000356205 KIF21BO75037 1637 aa26.22■■□□□ 1.79
SLC39A1-202ENST00000356205 ABCA10Q8WWZ4 1543 aa26.22■■□□□ 1.79
SLC39A1-202ENST00000356205 RAD54L2Q9Y4B4 1467 aa26.22■■□□□ 1.79
SLC39A1-202ENST00000356205 WDR62O43379 1518 aa26.21■■□□□ 1.79
SLC39A1-202ENST00000356205 EHMT2Q96KQ7 1210 aa26.19■■□□□ 1.78
SLC39A1-202ENST00000356205 GOLGA3Q08378 1498 aa26.19■■□□□ 1.78
SLC39A1-202ENST00000356205 WDR97A6NE52 1622 aa26.15■■□□□ 1.78
SLC39A1-202ENST00000356205 THOC2Q8NI27 1593 aaKnown RBP26.14■■□□□ 1.78
SLC39A1-202ENST00000356205 PRXQ9BXM0 1461 aa26.11■■□□□ 1.77
SLC39A1-202ENST00000356205 HRCP23327 699 aa26.1■■□□□ 1.77
SLC39A1-202ENST00000356205 TARBP1Q13395 1621 aaKnown RBP26.09■■□□□ 1.77
SLC39A1-202ENST00000356205 ERICH3Q5RHP9 1530 aa26.08■■□□□ 1.77
SLC39A1-202ENST00000356205 TNIKQ9UKE5 1360 aa26.06■■□□□ 1.76
SLC39A1-202ENST00000356205 RAPGEF2Q9Y4G8 1499 aa26.05■■□□□ 1.76
SLC39A1-202ENST00000356205 IGF1RP08069 1367 aa26.04■■□□□ 1.76
SLC39A1-202ENST00000356205 ABCA5Q8WWZ7 1642 aa26.03■■□□□ 1.76
SLC39A1-202ENST00000356205 IFT140Q96RY7 1462 aa26■■□□□ 1.75
SLC39A1-202ENST00000356205 UBTFP17480 764 aaKnown RBP26■■□□□ 1.75
SLC39A1-202ENST00000356205 TDRD9Q8NDG6 1382 aaKnown RBP25.95■■□□□ 1.75
SLC39A1-202ENST00000356205 GAPVD1Q14C86 1478 aa25.95■■□□□ 1.74
SLC39A1-202ENST00000356205 CUL7Q14999 1698 aa25.92■■□□□ 1.74
SLC39A1-202ENST00000356205 CARMIL1Q5VZK9 1371 aa25.92■■□□□ 1.74
SLC39A1-202ENST00000356205 CEP162Q5TB80 1403 aa25.92■■□□□ 1.74
SLC39A1-202ENST00000356205 PBRM1Q86U86 1689 aa25.82■■□□□ 1.72
SLC39A1-202ENST00000356205 ZNF608Q9ULD9 1512 aaPredicted RBP25.82■■□□□ 1.72
SLC39A1-202ENST00000356205 AQRO60306 1485 aaKnown RBP eCLIP25.81■■□□□ 1.722e-6■■■■■ 26.9
SLC39A1-202ENST00000356205 GRIN2BQ13224 1484 aa25.78■■□□□ 1.72
SLC39A1-202ENST00000356205 EIF4G3O43432 1585 aaKnown RBP25.77■■□□□ 1.72
SLC39A1-202ENST00000356205 PCGF6Q9BYE7 350 aa25.76■■□□□ 1.71
SLC39A1-202ENST00000356205 CLIP1P30622 1438 aa25.74■■□□□ 1.71
SLC39A1-202ENST00000356205 ADAMTS12P58397 1594 aa25.71■■□□□ 1.71
SLC39A1-202ENST00000356205 FHAD1B1AJZ9 1412 aa25.69■■□□□ 1.7
SLC39A1-202ENST00000356205 SNAPC4Q5SXM2 1469 aa25.62■■□□□ 1.69
SLC39A1-202ENST00000356205 CTTNBP2Q8WZ74 1663 aa25.59■■□□□ 1.69
SLC39A1-202ENST00000356205 MAGI1Q96QZ7 1491 aaPredicted RBP25.59■■□□□ 1.69
SLC39A1-202ENST00000356205 RANGAP1P46060 587 aaPredicted RBP25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms