RNA–Protein interactions for RNA: ENST00000356205.8

SLC39A1-202, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-202ENST00000356205 PCBP2Q15366 365 aaKnown RBP eCLIP15.87■□□□□ 0.134e-14■■□□□ 14.1
SLC39A1-202ENST00000356205 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.48■□□□□ 0.552e-13■■□□□ 12
SLC39A1-202ENST00000356205 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.88□□□□□ -0.353e-9■■□□□ 13.8
SLC39A1-202ENST00000356205 SND1Q7KZF4 910 aaKnown RBP eCLIP17.48■□□□□ 0.395e-9■■■■■ 31.3
SLC39A1-202ENST00000356205 FXR2P51116 673 aaKnown RBP eCLIP18.31■□□□□ 0.521e-8■■■■■ 32.1
SLC39A1-202ENST00000356205 UPF1Q92900 1129 aaKnown RBP eCLIP19.88■□□□□ 0.771e-8■■■■■ 65.8
SLC39A1-202ENST00000356205 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.04■□□□□ 0.322e-8■■■■■ 27.4
SLC39A1-202ENST00000356205 RPS3P23396 243 aaKnown RBP eCLIP16.07■□□□□ 0.163e-8■■■■□ 23.3
SLC39A1-202ENST00000356205 PABPC4Q13310 644 aaKnown RBP eCLIP18.23■□□□□ 0.513e-8■■■■□ 20.9
SLC39A1-202ENST00000356205 DDX3XO00571 662 aaKnown RBP eCLIP17.4■□□□□ 0.387e-8■■■■□ 19.6
SLC39A1-202ENST00000356205 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.95■□□□□ 0.31e-7■■■□□ 18.7
SLC39A1-202ENST00000356205 ZC3H11AO75152 810 aaKnown RBP eCLIP17.5■□□□□ 0.394e-7■■■■■ 41.2
SLC39A1-202ENST00000356205 AKAP1Q92667 903 aaKnown RBP eCLIP14.75□□□□□ -0.054e-7■■■■■ 28
SLC39A1-202ENST00000356205 GRSF1Q12849 480 aaKnown RBP eCLIP16.04■□□□□ 0.164e-7■■■■■ 65.7
SLC39A1-202ENST00000356205 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.3■□□□□ 0.364e-7■□□□□ 9
SLC39A1-202ENST00000356205 DDX6P26196 483 aaKnown RBP eCLIP16.56■□□□□ 0.246e-7■□□□□ 8.8
SLC39A1-202ENST00000356205 TIA1P31483 386 aaKnown RBP eCLIP15.53■□□□□ 0.086e-7■■■□□ 18.9
SLC39A1-202ENST00000356205 LARP4Q71RC2 724 aaKnown RBP eCLIP15.91■□□□□ 0.148e-7■■■□□ 15.3
SLC39A1-202ENST00000356205 AQRO60306 1485 aaKnown RBP eCLIP25.81■■□□□ 1.722e-6■■■■■ 26.9
SLC39A1-202ENST00000356205 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.21■■□□□ 1.476e-6■■■■□ 21.5
SLC39A1-202ENST00000356205 SUB1P53999 127 aaKnown RBP eCLIP12.89□□□□□ -0.358e-6■■■□□ 15.3
Retrieved 21 of 21 RNA–protein pairs in 16.2 ms