RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 DNAH9Q9NYC9 4486 aa2.25□□□□□ -2.05
CKAP5-202ENST00000354558 CMYA5Q8N3K9 4069 aa2.24□□□□□ -2.05
CKAP5-202ENST00000354558 LCE2AQ5TA79 106 aaPredicted RBP2.24□□□□□ -2.05
CKAP5-202ENST00000354558 PKD1L1Q8TDX9 2849 aa2.23□□□□□ -2.05
CKAP5-202ENST00000354558 KRTAP12-3P60328 96 aa2.23□□□□□ -2.05
CKAP5-202ENST00000354558 SPRR2DP22532 72 aa2.2□□□□□ -2.06
CKAP5-202ENST00000354558 TENM3Q9P273 2699 aa2.2□□□□□ -2.06
CKAP5-202ENST00000354558 VWFP04275 2813 aa2.2□□□□□ -2.06
CKAP5-202ENST00000354558 LCE3AQ5TA76 89 aa2.19□□□□□ -2.06
CKAP5-202ENST00000354558 DNHD1Q96M86 4753 aa2.19□□□□□ -2.06
CKAP5-202ENST00000354558 KRTAP10-4P60372 401 aaPredicted RBP2.18□□□□□ -2.06
CKAP5-202ENST00000354558 ANK2Q01484 3957 aa2.17□□□□□ -2.06
CKAP5-202ENST00000354558 MT1HP80294 61 aa2.17□□□□□ -2.06
CKAP5-202ENST00000354558 KRTAP3-1Q9BYR8 98 aa2.16□□□□□ -2.06
CKAP5-202ENST00000354558 CSMD3Q7Z407 3707 aa2.16□□□□□ -2.06
CKAP5-202ENST00000354558 FBN3Q75N90 2809 aa2.15□□□□□ -2.07
CKAP5-202ENST00000354558 DNAH1Q9P2D7 4330 aa2.15□□□□□ -2.07
CKAP5-202ENST00000354558 TGP01266 2768 aa2.15□□□□□ -2.07
CKAP5-202ENST00000354558 SPRR5A0A1B0GTR4 108 aa2.13□□□□□ -2.07
CKAP5-202ENST00000354558 PCLOQ9Y6V0 5065 aa2.12□□□□□ -2.07
CKAP5-202ENST00000354558 DNAH3Q8TD57 4116 aa2.12□□□□□ -2.07
CKAP5-202ENST00000354558 PRKDCP78527 4128 aaKnown RBP2.11□□□□□ -2.07
CKAP5-202ENST00000354558 COL7A1Q02388 2944 aa2.11□□□□□ -2.07
CKAP5-202ENST00000354558 KMT2AQ03164 3969 aa2.1□□□□□ -2.07
CKAP5-202ENST00000354558 PLECQ15149 4684 aaKnown RBP2.09□□□□□ -2.08
CKAP5-202ENST00000354558 INE1O15225 51 aa2.08□□□□□ -2.08
CKAP5-202ENST00000354558 FAT2Q9NYQ8 4349 aa2.07□□□□□ -2.08
CKAP5-202ENST00000354558 DNAH10Q8IVF4 4471 aa2.07□□□□□ -2.08
CKAP5-202ENST00000354558 DNAH6Q9C0G6 4158 aa2.06□□□□□ -2.08
CKAP5-202ENST00000354558 STARD9Q9P2P6 4700 aa2.05□□□□□ -2.08
CKAP5-202ENST00000354558 VPS13DQ5THJ4 4388 aa2.05□□□□□ -2.08
CKAP5-202ENST00000354558 MT2AP02795 61 aa2.04□□□□□ -2.08
CKAP5-202ENST00000354558 LYSTQ99698 3801 aa2.04□□□□□ -2.08
CKAP5-202ENST00000354558 DNAH17Q9UFH2 4485 aa2.04□□□□□ -2.08
CKAP5-202ENST00000354558 DYNC2H1Q8NCM8 4307 aaKnown RBP2.04□□□□□ -2.08
CKAP5-202ENST00000354558 DNAH7Q8WXX0 4024 aa2.04□□□□□ -2.08
CKAP5-202ENST00000354558 KRTAP12-4P60329 112 aa2.03□□□□□ -2.08
CKAP5-202ENST00000354558 DNAH2Q9P225 4427 aa2.03□□□□□ -2.08
CKAP5-202ENST00000354558 FRAS1Q86XX4 4008 aa2.03□□□□□ -2.08
CKAP5-202ENST00000354558 DNAH5Q8TE73 4624 aa2.02□□□□□ -2.09
CKAP5-202ENST00000354558 KRTAP17-1Q9BYP8 105 aa2.01□□□□□ -2.09
CKAP5-202ENST00000354558 LRP1BQ9NZR2 4599 aa2□□□□□ -2.09
CKAP5-202ENST00000354558 DNAH11Q96DT5 4516 aa2□□□□□ -2.09
CKAP5-202ENST00000354558 KRTAP19-5Q3LI72 72 aa2□□□□□ -2.09
CKAP5-202ENST00000354558 KRTAP4-1Q9BYQ7 146 aa2□□□□□ -2.09
CKAP5-202ENST00000354558 VPS13BQ7Z7G8 4022 aa1.99□□□□□ -2.09
CKAP5-202ENST00000354558 MT1FP04733 61 aa1.99□□□□□ -2.09
CKAP5-202ENST00000354558 RYR3Q15413 4870 aa1.99□□□□□ -2.09
CKAP5-202ENST00000354558 MEGF8Q7Z7M0 2845 aa1.98□□□□□ -2.09
CKAP5-202ENST00000354558 HYDINQ4G0P3 5121 aa1.98□□□□□ -2.09
CKAP5-202ENST00000354558 KRTAP9-6A0A140TA67 174 aa1.97□□□□□ -2.09
CKAP5-202ENST00000354558 BIRC6Q9NR09 4857 aa1.97□□□□□ -2.09
CKAP5-202ENST00000354558 HERC2O95714 4834 aa1.96□□□□□ -2.09
CKAP5-202ENST00000354558 KRTAP9-2Q9BYQ4 174 aa1.96□□□□□ -2.1
CKAP5-202ENST00000354558 SACSQ9NZJ4 4579 aa1.96□□□□□ -2.1
CKAP5-202ENST00000354558 DYNC1H1Q14204 4646 aaKnown RBP1.96□□□□□ -2.1
CKAP5-202ENST00000354558 MT4P47944 62 aa1.96□□□□□ -2.1
CKAP5-202ENST00000354558 KRTAP19-1Q8IUB9 90 aa1.96□□□□□ -2.1
CKAP5-202ENST00000354558 LCE3BQ5TA77 95 aa1.95□□□□□ -2.1
CKAP5-202ENST00000354558 KRTAP20-1Q3LI63 56 aa1.94□□□□□ -2.1
CKAP5-202ENST00000354558 SRRM2Q9UQ35 2752 aaKnown RBP1.93□□□□□ -2.1
CKAP5-202ENST00000354558 DNAH8Q96JB1 4490 aa1.93□□□□□ -2.1
CKAP5-202ENST00000354558 KMT2CQ8NEZ4 4911 aaKnown RBP1.93□□□□□ -2.1
CKAP5-202ENST00000354558 HECTD4Q9Y4D8 3996 aa1.93□□□□□ -2.1
CKAP5-202ENST00000354558 HSPG2P98160 4391 aa1.93□□□□□ -2.1
CKAP5-202ENST00000354558 SPRR2GQ9BYE4 73 aa1.91□□□□□ -2.1
CKAP5-202ENST00000354558 FAT1Q14517 4588 aa1.9□□□□□ -2.1
CKAP5-202ENST00000354558 LCE3CQ5T5A8 94 aa1.9□□□□□ -2.11
CKAP5-202ENST00000354558 MT1GP13640 62 aa1.88□□□□□ -2.11
CKAP5-202ENST00000354558 APOBP04114 4563 aaKnown RBP1.88□□□□□ -2.11
CKAP5-202ENST00000354558 RYR2Q92736 4967 aa1.88□□□□□ -2.11
CKAP5-202ENST00000354558 EPPK1P58107 5090 aaKnown RBP1.88□□□□□ -2.11
CKAP5-202ENST00000354558 PKHD1L1Q86WI1 4243 aa1.87□□□□□ -2.11
CKAP5-202ENST00000354558 PKHD1P08F94 4074 aa1.85□□□□□ -2.11
CKAP5-202ENST00000354558 RYR1P21817 5038 aa1.83□□□□□ -2.12
CKAP5-202ENST00000354558 FAT3Q8TDW7 4589 aa1.83□□□□□ -2.12
CKAP5-202ENST00000354558 LPAP08519 4548 aa1.83□□□□□ -2.12
CKAP5-202ENST00000354558 KRTAP9-7A8MTY7 169 aa1.82□□□□□ -2.12
CKAP5-202ENST00000354558 PKD1P98161 4303 aa1.81□□□□□ -2.12
CKAP5-202ENST00000354558 TNXBP22105 4242 aa1.8□□□□□ -2.12
CKAP5-202ENST00000354558 LCE1BQ5T7P3 118 aa1.8□□□□□ -2.12
CKAP5-202ENST00000354558 LCE4AQ5TA78 99 aa1.79□□□□□ -2.12
CKAP5-202ENST00000354558 KRTAP19-4Q3LI73 84 aa1.79□□□□□ -2.12
CKAP5-202ENST00000354558 KIAA1109Q2LD37 5005 aa1.78□□□□□ -2.12
CKAP5-202ENST00000354558 LCE1DQ5T752 114 aa1.77□□□□□ -2.13
CKAP5-202ENST00000354558 LRP1Q07954 4544 aaKnown RBP1.77□□□□□ -2.13
CKAP5-202ENST00000354558 KRTAP19-6Q3LI70 58 aa1.76□□□□□ -2.13
CKAP5-202ENST00000354558 LCE5AQ5TCM9 118 aa1.76□□□□□ -2.13
CKAP5-202ENST00000354558 ABCA13Q86UQ4 5058 aa1.75□□□□□ -2.13
CKAP5-202ENST00000354558 LCE3EQ5T5B0 92 aa1.75□□□□□ -2.13
CKAP5-202ENST00000354558 KRTAP4-8A0A0G2JLE6 195 aa1.74□□□□□ -2.13
CKAP5-202ENST00000354558 KRTAP4-8Q9BYQ9 185 aa1.74□□□□□ -2.13
CKAP5-202ENST00000354558 MYCBP2O75592 4640 aa1.74□□□□□ -2.13
CKAP5-202ENST00000354558 KRTAP2-3P0C7H8 128 aa1.73□□□□□ -2.13
CKAP5-202ENST00000354558 KRTAP19-8Q3LI54 63 aa1.73□□□□□ -2.13
CKAP5-202ENST00000354558 KRTAP2-4Q9BYR9 128 aa1.73□□□□□ -2.13
CKAP5-202ENST00000354558 LCE3DQ9BYE3 92 aa1.73□□□□□ -2.13
CKAP5-202ENST00000354558 KRTAP19-3Q7Z4W3 81 aa1.72□□□□□ -2.13
CKAP5-202ENST00000354558 MUC17Q685J3 4493 aa1.72□□□□□ -2.13
CKAP5-202ENST00000354558 MT1XP80297 61 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms