RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 COX6B2Q6YFQ2 88 aa10.28□□□□□ -0.76
COL13A1-201ENST00000354547 Q5VSD8 79 aa10.26□□□□□ -0.77
COL13A1-201ENST00000354547 TNXBP22105 4242 aa10.25□□□□□ -0.77
COL13A1-201ENST00000354547 H1FX-AS1Q4G0G2 97 aa10.21□□□□□ -0.77
COL13A1-201ENST00000354547 KRTAP10-8P60410 259 aa10.19□□□□□ -0.78
COL13A1-201ENST00000354547 LCE2DQ5TA82 110 aaPredicted RBP10.18□□□□□ -0.78
COL13A1-201ENST00000354547 CSAG1Q6PB30 78 aa10.18□□□□□ -0.78
COL13A1-201ENST00000354547 KRTAP17-1Q9BYP8 105 aa10.11□□□□□ -0.79
COL13A1-201ENST00000354547 XP32Q5T750 250 aa10.1□□□□□ -0.79
COL13A1-201ENST00000354547 RYR3Q15413 4870 aa10.1□□□□□ -0.79
COL13A1-201ENST00000354547 RPL37P61927 97 aaKnown RBP10.09□□□□□ -0.79
COL13A1-201ENST00000354547 KIAA1109Q2LD37 5005 aa10.06□□□□□ -0.8
COL13A1-201ENST00000354547 LINC01554Q52M75 96 aa10.04□□□□□ -0.8
COL13A1-201ENST00000354547 RYR1P21817 5038 aa10.02□□□□□ -0.81
COL13A1-201ENST00000354547 A0A0D9SG42 100 aa9.98□□□□□ -0.81
COL13A1-201ENST00000354547 CRIPTQ9P021 101 aa9.98□□□□□ -0.81
COL13A1-201ENST00000354547 S4R3F8 94 aa9.96□□□□□ -0.81
COL13A1-201ENST00000354547 LPAP08519 4548 aa9.94□□□□□ -0.82
COL13A1-201ENST00000354547 KRTAP10-6P60371 365 aaPredicted RBP9.94□□□□□ -0.82
COL13A1-201ENST00000354547 K7ERS5 55 aa9.93□□□□□ -0.82
COL13A1-201ENST00000354547 KRTAP13-4Q3LI77 160 aa9.91□□□□□ -0.82
COL13A1-201ENST00000354547 MT1HL1P0DM35 61 aa9.9□□□□□ -0.82
COL13A1-201ENST00000354547 LRP2P98164 4655 aa9.88□□□□□ -0.83
COL13A1-201ENST00000354547 P0C880 135 aa9.85□□□□□ -0.83
COL13A1-201ENST00000354547 KRTAP25-1Q3LHN0 102 aa9.81□□□□□ -0.84
COL13A1-201ENST00000354547 EPPK1P58107 5090 aaKnown RBP9.77□□□□□ -0.85
COL13A1-201ENST00000354547 ABCA13Q86UQ4 5058 aa9.7□□□□□ -0.86
COL13A1-201ENST00000354547 ROMO1P60602 79 aa9.69□□□□□ -0.86
COL13A1-201ENST00000354547 KRTAP4-5Q9BYR2 181 aa9.64□□□□□ -0.87
COL13A1-201ENST00000354547 TPRXLQ17RH7 258 aa9.63□□□□□ -0.87
COL13A1-201ENST00000354547 SPINT4Q6UDR6 99 aa9.61□□□□□ -0.87
COL13A1-201ENST00000354547 KRTAP12-2P59991 146 aa9.59□□□□□ -0.87
COL13A1-201ENST00000354547 C10orf95Q9H7T3 257 aa9.53□□□□□ -0.88
COL13A1-201ENST00000354547 KRTAP12-1P59990 96 aa9.47□□□□□ -0.89
COL13A1-201ENST00000354547 SEC61BP60468 96 aaKnown RBP9.46□□□□□ -0.9
COL13A1-201ENST00000354547 LCE2CQ5TA81 110 aa9.38□□□□□ -0.91
COL13A1-201ENST00000354547 M0QZ58 72 aa9.37□□□□□ -0.91
COL13A1-201ENST00000354547 R4GN34 69 aa9.31□□□□□ -0.92
COL13A1-201ENST00000354547 KRTAP4-1Q9BYQ7 146 aa9.3□□□□□ -0.92
COL13A1-201ENST00000354547 MUC17Q685J3 4493 aa9.28□□□□□ -0.92
COL13A1-201ENST00000354547 LCE2BO14633 110 aa9.26□□□□□ -0.93
COL13A1-201ENST00000354547 LORP23490 312 aaPredicted RBP9.24□□□□□ -0.93
COL13A1-201ENST00000354547 HERC2O95714 4834 aa9.23□□□□□ -0.93
COL13A1-201ENST00000354547 MUC2Q02817 5179 aa9.22□□□□□ -0.93
COL13A1-201ENST00000354547 LCE2AQ5TA79 106 aaPredicted RBP9.21□□□□□ -0.93
COL13A1-201ENST00000354547 KRTAP19-2Q3LHN2 52 aa8.98□□□□□ -0.97
COL13A1-201ENST00000354547 KRTAP15-1Q3LI76 137 aa8.91□□□□□ -0.98
COL13A1-201ENST00000354547 HERC1Q15751 4861 aa8.9□□□□□ -0.98
COL13A1-201ENST00000354547 KRTAP23-1A1A580 65 aa8.88□□□□□ -0.99
COL13A1-201ENST00000354547 CAMK2N1Q7Z7J9 78 aa8.88□□□□□ -0.99
COL13A1-201ENST00000354547 NDUFAF8A1L188 74 aa8.83□□□□□ -1
COL13A1-201ENST00000354547 FLGP20930 4061 aaPredicted RBP8.81□□□□□ -1
COL13A1-201ENST00000354547 BIRC6Q9NR09 4857 aa8.8□□□□□ -1
COL13A1-201ENST00000354547 PCLOQ9Y6V0 5065 aa8.76□□□□□ -1.01
COL13A1-201ENST00000354547 FAT4Q6V0I7 4981 aa8.75□□□□□ -1.01
COL13A1-201ENST00000354547 HMCN2Q8NDA2 5059 aa8.65□□□□□ -1.03
COL13A1-201ENST00000354547 PLAC4Q8WY50 150 aa8.62□□□□□ -1.03
COL13A1-201ENST00000354547 RNF213Q63HN8 5207 aa8.56□□□□□ -1.04
COL13A1-201ENST00000354547 M0R2T5 61 aa8.52□□□□□ -1.05
COL13A1-201ENST00000354547 PP632Q6XCG6 107 aa8.46□□□□□ -1.05
COL13A1-201ENST00000354547 TNP1P09430 55 aa8.44□□□□□ -1.06
COL13A1-201ENST00000354547 UBR4Q5T4S7 5183 aa8.44□□□□□ -1.06
COL13A1-201ENST00000354547 LUZP6Q538Z0 58 aa8.41□□□□□ -1.06
COL13A1-201ENST00000354547 KRTAP19-1Q8IUB9 90 aa8.32□□□□□ -1.08
COL13A1-201ENST00000354547 MT1HP80294 61 aa8.3□□□□□ -1.08
COL13A1-201ENST00000354547 SPRR2GQ9BYE4 73 aa8.28□□□□□ -1.08
COL13A1-201ENST00000354547 KRTAP10-10P60014 251 aa8.27□□□□□ -1.09
COL13A1-201ENST00000354547 MT1FP04733 61 aa8.21□□□□□ -1.1
COL13A1-201ENST00000354547 MT2AP02795 61 aa8.17□□□□□ -1.1
COL13A1-201ENST00000354547 KRTAP9-8Q9BYQ0 159 aa8.09□□□□□ -1.11
COL13A1-201ENST00000354547 LCE3AQ5TA76 89 aa8.05□□□□□ -1.12
COL13A1-201ENST00000354547 MT1BP07438 61 aa7.88□□□□□ -1.15
COL13A1-201ENST00000354547 KRTAP19-8Q3LI54 63 aa7.87□□□□□ -1.15
COL13A1-201ENST00000354547 SPRR5A0A1B0GTR4 108 aa7.85□□□□□ -1.15
COL13A1-201ENST00000354547 KRTAP10-5P60370 271 aa7.84□□□□□ -1.15
COL13A1-201ENST00000354547 MT1XP80297 61 aa7.83□□□□□ -1.16
COL13A1-201ENST00000354547 KRTAP9-3Q9BYQ3 159 aa7.73□□□□□ -1.17
COL13A1-201ENST00000354547 KRTAP10-12P60413 245 aa7.7□□□□□ -1.18
COL13A1-201ENST00000354547 KRTAP8-1Q8IUC2 63 aa7.7□□□□□ -1.18
COL13A1-201ENST00000354547 KRTAP10-7P60409 375 aaPredicted RBP7.69□□□□□ -1.18
COL13A1-201ENST00000354547 USH2AO75445 5202 aa7.65□□□□□ -1.18
COL13A1-201ENST00000354547 KRTAP12-3P60328 96 aa7.63□□□□□ -1.19
COL13A1-201ENST00000354547 KMT2DO14686 5537 aa7.52□□□□□ -1.21
COL13A1-201ENST00000354547 PRO2289Q9P1D8 64 aa7.51□□□□□ -1.21
COL13A1-201ENST00000354547 KRTAP19-5Q3LI72 72 aa7.35□□□□□ -1.23
COL13A1-201ENST00000354547 KRTAP4-8A0A0G2JLE6 195 aa7.3□□□□□ -1.24
COL13A1-201ENST00000354547 KRTAP4-8Q9BYQ9 185 aa7.3□□□□□ -1.24
COL13A1-201ENST00000354547 LCE3CQ5T5A8 94 aa7.15□□□□□ -1.27
COL13A1-201ENST00000354547 FSIP2Q5CZC0 6907 aa7.03□□□□□ -1.28
COL13A1-201ENST00000354547 KRTAP4-7Q9BYR0 210 aa7.01□□□□□ -1.29
COL13A1-201ENST00000354547 KRTAP19-7Q3SYF9 63 aa6.97□□□□□ -1.29
COL13A1-201ENST00000354547 KRTAP9-6A8MVA2 160 aa6.95□□□□□ -1.3
COL13A1-201ENST00000354547 SSPOA2VEC9 5147 aa6.9□□□□□ -1.3
COL13A1-201ENST00000354547 INE1O15225 51 aa6.88□□□□□ -1.31
COL13A1-201ENST00000354547 MT1LQ93083 61 aa6.76□□□□□ -1.33
COL13A1-201ENST00000354547 MT1EP04732 61 aa6.76□□□□□ -1.33
COL13A1-201ENST00000354547 FCGBPQ9Y6R7 5405 aaPredicted RBP6.64□□□□□ -1.35
COL13A1-201ENST00000354547 MUC12Q9UKN1 5478 aa6.62□□□□□ -1.35
COL13A1-201ENST00000354547 KRTAP19-6Q3LI70 58 aa6.6□□□□□ -1.35
COL13A1-201ENST00000354547 KRTAP4-3Q9BYR4 195 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms