RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 KRTAP5-4Q6L8H1 288 aa4.46□□□□□ -1.69
C11orf54-202ENST00000354421 IGHV6-1A0A0B4J1U7 121 aa4.46□□□□□ -1.7
C11orf54-202ENST00000354421 IGLV9-49A0A0B4J1Y8 123 aa4.46□□□□□ -1.7
C11orf54-202ENST00000354421 APLNQ9ULZ1 77 aa4.45□□□□□ -1.7
C11orf54-202ENST00000354421 PANO1I0J062 215 aa4.44□□□□□ -1.7
C11orf54-202ENST00000354421 KRTAP13-3Q3SY46 172 aa4.44□□□□□ -1.7
C11orf54-202ENST00000354421 UBE2DNLQ8IWF7 75 aa4.44□□□□□ -1.7
C11orf54-202ENST00000354421 ACYP2P14621 99 aa4.43□□□□□ -1.7
C11orf54-202ENST00000354421 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
C11orf54-202ENST00000354421 NOTCH2NLQ7Z3S9 236 aa4.43□□□□□ -1.7
C11orf54-202ENST00000354421 SPACA4Q8TDM5 124 aa4.43□□□□□ -1.7
C11orf54-202ENST00000354421 C8orf87E5RJ46 101 aa4.41□□□□□ -1.7
C11orf54-202ENST00000354421 Q6ZRN7 208 aaPredicted RBP4.41□□□□□ -1.7
C11orf54-202ENST00000354421 Q5W150 140 aa4.41□□□□□ -1.7
C11orf54-202ENST00000354421 PRR26Q8N8Z3 221 aa4.41□□□□□ -1.7
C11orf54-202ENST00000354421 NBDYA0A0U1RRE5 68 aa4.39□□□□□ -1.71
C11orf54-202ENST00000354421 DMAC1Q96GE9 116 aa4.39□□□□□ -1.71
C11orf54-202ENST00000354421 IGLV5-52A0A0A0MRZ9 124 aa4.38□□□□□ -1.71
C11orf54-202ENST00000354421 RTL8CO15255 209 aa4.37□□□□□ -1.71
C11orf54-202ENST00000354421 ZNF861PO60384 105 aa4.37□□□□□ -1.71
C11orf54-202ENST00000354421 KRTAP4-4Q9BYR3 166 aa4.37□□□□□ -1.71
C11orf54-202ENST00000354421 PSORS1C2Q9UIG4 136 aa4.37□□□□□ -1.71
C11orf54-202ENST00000354421 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
C11orf54-202ENST00000354421 Q5VSD8 79 aa4.36□□□□□ -1.71
C11orf54-202ENST00000354421 SPATA8Q6RVD6 105 aa4.35□□□□□ -1.71
C11orf54-202ENST00000354421 NUPR2A6NF83 97 aa4.35□□□□□ -1.71
C11orf54-202ENST00000354421 LINC00313P59037 77 aa4.35□□□□□ -1.71
C11orf54-202ENST00000354421 ANAPC11Q9NYG5 84 aa4.35□□□□□ -1.71
C11orf54-202ENST00000354421 A0A087WTM6 91 aa4.33□□□□□ -1.72
C11orf54-202ENST00000354421 IGKV2-30P06310 120 aa4.33□□□□□ -1.72
C11orf54-202ENST00000354421 SPINK6Q6UWN8 80 aa4.33□□□□□ -1.72
C11orf54-202ENST00000354421 SSBP3-AS1Q7Z2R9 100 aa4.33□□□□□ -1.72
C11orf54-202ENST00000354421 A0A1B0GU69 56 aa4.32□□□□□ -1.72
C11orf54-202ENST00000354421 UQCR11O14957 56 aa4.31□□□□□ -1.72
C11orf54-202ENST00000354421 IGLV7-43P04211 117 aa4.29□□□□□ -1.72
C11orf54-202ENST00000354421 PRAC1Q96KF2 57 aa4.29□□□□□ -1.72
C11orf54-202ENST00000354421 SSPOA2VEC9 5147 aa4.29□□□□□ -1.72
C11orf54-202ENST00000354421 CIRBP-AS1Q8TBR5 109 aa4.29□□□□□ -1.72
C11orf54-202ENST00000354421 MIR22HGQ0VDD5 57 aa4.28□□□□□ -1.72
C11orf54-202ENST00000354421 LINC01554Q52M75 96 aa4.27□□□□□ -1.73
C11orf54-202ENST00000354421 KRTAP16-1A8MUX0 517 aa4.26□□□□□ -1.73
C11orf54-202ENST00000354421 ADM2Q7Z4H4 148 aa4.26□□□□□ -1.73
C11orf54-202ENST00000354421 RETNLBQ9BQ08 111 aa4.26□□□□□ -1.73
C11orf54-202ENST00000354421 LRP1Q07954 4544 aaKnown RBP4.26□□□□□ -1.73
C11orf54-202ENST00000354421 IGKV2D-30A0A075B6S6 120 aa4.24□□□□□ -1.73
C11orf54-202ENST00000354421 FAT3Q8TDW7 4589 aa4.24□□□□□ -1.73
C11orf54-202ENST00000354421 TNXBP22105 4242 aa4.22□□□□□ -1.73
C11orf54-202ENST00000354421 KRTAP13-2Q52LG2 175 aa4.21□□□□□ -1.74
C11orf54-202ENST00000354421 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
C11orf54-202ENST00000354421 C1orf134Q5TEV5 83 aa4.17□□□□□ -1.74
C11orf54-202ENST00000354421 CSAG1Q6PB30 78 aa4.16□□□□□ -1.74
C11orf54-202ENST00000354421 NEBP20929 6669 aa4.14□□□□□ -1.75
C11orf54-202ENST00000354421 SMR3BP02814 79 aaPredicted RBP4.13□□□□□ -1.75
C11orf54-202ENST00000354421 KRTAP1-4P0C5Y4 121 aa4.13□□□□□ -1.75
C11orf54-202ENST00000354421 RPS29P62273 56 aaKnown RBP4.13□□□□□ -1.75
C11orf54-202ENST00000354421 DNAH8Q96JB1 4490 aa4.13□□□□□ -1.75
C11orf54-202ENST00000354421 SPINK1P00995 79 aa4.11□□□□□ -1.75
C11orf54-202ENST00000354421 Q6ZSA8 131 aa4.11□□□□□ -1.75
C11orf54-202ENST00000354421 A8MUU9 505 aa4.1□□□□□ -1.75
C11orf54-202ENST00000354421 H0YAA0 97 aa4.09□□□□□ -1.76
C11orf54-202ENST00000354421 SYNE2Q8WXH0 6885 aaKnown RBP4.07□□□□□ -1.76
C11orf54-202ENST00000354421 KRTAP25-1Q3LHN0 102 aa4.07□□□□□ -1.76
C11orf54-202ENST00000354421 GPR98Q8WXG9 6306 aa4.07□□□□□ -1.76
C11orf54-202ENST00000354421 KRTAP10-1P60331 282 aa4.07□□□□□ -1.76
C11orf54-202ENST00000354421 TYMSOSQ8TAI1 123 aa4.07□□□□□ -1.76
C11orf54-202ENST00000354421 A0A1B0GU33 70 aa4.06□□□□□ -1.76
C11orf54-202ENST00000354421 LINC00304Q8N9R0 145 aa4.06□□□□□ -1.76
C11orf54-202ENST00000354421 K7ERS5 55 aa4.05□□□□□ -1.76
C11orf54-202ENST00000354421 H1FX-AS1Q4G0G2 97 aa4.05□□□□□ -1.76
C11orf54-202ENST00000354421 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.76
C11orf54-202ENST00000354421 C20orf166-AS1Q96NR2 134 aa4.03□□□□□ -1.76
C11orf54-202ENST00000354421 LPAP08519 4548 aa3.99□□□□□ -1.77
C11orf54-202ENST00000354421 ROMO1P60602 79 aa3.99□□□□□ -1.77
C11orf54-202ENST00000354421 MT1HL1P0DM35 61 aa3.98□□□□□ -1.77
C11orf54-202ENST00000354421 USH2AO75445 5202 aa3.96□□□□□ -1.78
C11orf54-202ENST00000354421 FCGBPQ9Y6R7 5405 aaPredicted RBP3.96□□□□□ -1.78
C11orf54-202ENST00000354421 COX6B2Q6YFQ2 88 aa3.95□□□□□ -1.78
C11orf54-202ENST00000354421 MACF1Q9UPN3 7388 aaKnown RBP3.95□□□□□ -1.78
C11orf54-202ENST00000354421 C9orf92A6NGG3 77 aa3.93□□□□□ -1.78
C11orf54-202ENST00000354421 RPL37P61927 97 aaKnown RBP3.89□□□□□ -1.79
C11orf54-202ENST00000354421 CRIPTQ9P021 101 aa3.87□□□□□ -1.79
C11orf54-202ENST00000354421 P0C880 135 aa3.86□□□□□ -1.79
C11orf54-202ENST00000354421 KRTAP10-4P60372 401 aaPredicted RBP3.84□□□□□ -1.79
C11orf54-202ENST00000354421 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.79
C11orf54-202ENST00000354421 MT3P25713 68 aa3.84□□□□□ -1.8
C11orf54-202ENST00000354421 KRTAP13-4Q3LI77 160 aa3.84□□□□□ -1.8
C11orf54-202ENST00000354421 TPRXLQ17RH7 258 aa3.83□□□□□ -1.8
C11orf54-202ENST00000354421 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
C11orf54-202ENST00000354421 A0A0D9SG42 100 aa3.78□□□□□ -1.8
C11orf54-202ENST00000354421 S4R3F8 94 aa3.78□□□□□ -1.8
C11orf54-202ENST00000354421 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
C11orf54-202ENST00000354421 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
C11orf54-202ENST00000354421 SPINT4Q6UDR6 99 aa3.77□□□□□ -1.81
C11orf54-202ENST00000354421 KRTAP10-8P60410 259 aa3.73□□□□□ -1.81
C11orf54-202ENST00000354421 C10orf95Q9H7T3 257 aa3.73□□□□□ -1.81
C11orf54-202ENST00000354421 MUC12Q9UKN1 5478 aa3.72□□□□□ -1.81
C11orf54-202ENST00000354421 M0QZ58 72 aa3.72□□□□□ -1.81
C11orf54-202ENST00000354421 KRTAP12-1P59990 96 aa3.72□□□□□ -1.81
C11orf54-202ENST00000354421 KRTAP12-2P59991 146 aa3.72□□□□□ -1.81
C11orf54-202ENST00000354421 KMT2DO14686 5537 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms