RNA–Protein interactions for RNA: ENST00000354189.9

CASC1-202, Transcript of cancer susceptibility 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CASC1, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-202ENST00000354189 FRAS1Q86XX4 4008 aa2.12□□□□□ -2.07
CASC1-202ENST00000354189 FLNAP21333 2647 aaKnown RBP2.12□□□□□ -2.07
CASC1-202ENST00000354189 TGP01266 2768 aa2.12□□□□□ -2.07
CASC1-202ENST00000354189 ITPR2Q14571 2701 aa2.12□□□□□ -2.07
CASC1-202ENST00000354189 HECTD1Q9ULT8 2610 aa2.11□□□□□ -2.07
CASC1-202ENST00000354189 FASNP49327 2511 aaKnown RBP2.11□□□□□ -2.07
CASC1-202ENST00000354189 SETD2Q9BYW2 2564 aaPredicted RBP2.11□□□□□ -2.07
CASC1-202ENST00000354189 KRTAP10-1P60331 282 aa2.11□□□□□ -2.07
CASC1-202ENST00000354189 CSMD3Q7Z407 3707 aa2.11□□□□□ -2.07
CASC1-202ENST00000354189 TRRAPQ9Y4A5 3859 aa2.1□□□□□ -2.07
CASC1-202ENST00000354189 DNAH1Q9P2D7 4330 aa2.1□□□□□ -2.07
CASC1-202ENST00000354189 ACANP16112 2415 aa2.1□□□□□ -2.07
CASC1-202ENST00000354189 COL7A1Q02388 2944 aa2.08□□□□□ -2.08
CASC1-202ENST00000354189 NBEAL1Q6ZS30 2694 aa2.08□□□□□ -2.08
CASC1-202ENST00000354189 C9orf92A6NGG3 77 aa2.07□□□□□ -2.08
CASC1-202ENST00000354189 HIVEP1P15822 2718 aa2.07□□□□□ -2.08
CASC1-202ENST00000354189 CMYA5Q8N3K9 4069 aa2.07□□□□□ -2.08
CASC1-202ENST00000354189 NSD1Q96L73 2696 aaPredicted RBP2.05□□□□□ -2.08
CASC1-202ENST00000354189 KRTAP5-9P26371 169 aa2.05□□□□□ -2.08
CASC1-202ENST00000354189 DNAH3Q8TD57 4116 aa2.04□□□□□ -2.08
CASC1-202ENST00000354189 LCE1FQ5T754 118 aa2.04□□□□□ -2.08
CASC1-202ENST00000354189 ANK2Q01484 3957 aa2.03□□□□□ -2.08
CASC1-202ENST00000354189 NOTCH2Q04721 2471 aa2.03□□□□□ -2.09
CASC1-202ENST00000354189 TNP1P09430 55 aa2.02□□□□□ -2.09
CASC1-202ENST00000354189 MT3P25713 68 aa2.02□□□□□ -2.09
CASC1-202ENST00000354189 STAB2Q8WWQ8 2551 aa2.01□□□□□ -2.09
CASC1-202ENST00000354189 DNAH11Q96DT5 4516 aa2.01□□□□□ -2.09
CASC1-202ENST00000354189 TEP1Q99973 2627 aaKnown RBP2.01□□□□□ -2.09
CASC1-202ENST00000354189 HUWE1Q7Z6Z7 4374 aaKnown RBP2.01□□□□□ -2.09
CASC1-202ENST00000354189 LYSTQ99698 3801 aa2.01□□□□□ -2.09
CASC1-202ENST00000354189 TENM1Q9UKZ4 2725 aa2□□□□□ -2.09
CASC1-202ENST00000354189 DNAH8Q96JB1 4490 aa2□□□□□ -2.09
CASC1-202ENST00000354189 PKD1L1Q8TDX9 2849 aa1.99□□□□□ -2.09
CASC1-202ENST00000354189 DNAH9Q9NYC9 4486 aa1.99□□□□□ -2.09
CASC1-202ENST00000354189 ATRQ13535 2644 aa1.99□□□□□ -2.09
CASC1-202ENST00000354189 FLNBO75369 2602 aaKnown RBP1.98□□□□□ -2.09
CASC1-202ENST00000354189 FBN3Q75N90 2809 aa1.97□□□□□ -2.09
CASC1-202ENST00000354189 KRTAP21-3Q3LHN1 58 aa1.96□□□□□ -2.1
CASC1-202ENST00000354189 DNAH10Q8IVF4 4471 aa1.96□□□□□ -2.1
CASC1-202ENST00000354189 DYNC2H1Q8NCM8 4307 aaKnown RBP1.96□□□□□ -2.1
CASC1-202ENST00000354189 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
CASC1-202ENST00000354189 DNAH17Q9UFH2 4485 aa1.94□□□□□ -2.1
CASC1-202ENST00000354189 KRTAP10-10P60014 251 aa1.94□□□□□ -2.1
CASC1-202ENST00000354189 STAB1Q9NY15 2570 aa1.94□□□□□ -2.1
CASC1-202ENST00000354189 MYCBP2O75592 4640 aa1.94□□□□□ -2.1
CASC1-202ENST00000354189 NOTCH1P46531 2555 aa1.94□□□□□ -2.1
CASC1-202ENST00000354189 MAST4O15021 2626 aa1.94□□□□□ -2.1
CASC1-202ENST00000354189 DNAH6Q9C0G6 4158 aa1.93□□□□□ -2.1
CASC1-202ENST00000354189 DNHD1Q96M86 4753 aa1.93□□□□□ -2.1
CASC1-202ENST00000354189 PLECQ15149 4684 aaKnown RBP1.93□□□□□ -2.1
CASC1-202ENST00000354189 DNAH7Q8WXX0 4024 aa1.92□□□□□ -2.1
CASC1-202ENST00000354189 TENM3Q9P273 2699 aa1.91□□□□□ -2.1
CASC1-202ENST00000354189 PRKDCP78527 4128 aaKnown RBP1.9□□□□□ -2.1
CASC1-202ENST00000354189 STARD9Q9P2P6 4700 aa1.9□□□□□ -2.1
CASC1-202ENST00000354189 LCE3CQ5T5A8 94 aa1.9□□□□□ -2.11
CASC1-202ENST00000354189 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
CASC1-202ENST00000354189 KRTAP6-3Q3LI67 103 aa1.89□□□□□ -2.11
CASC1-202ENST00000354189 KMT2AQ03164 3969 aa1.89□□□□□ -2.11
CASC1-202ENST00000354189 LCE1EQ5T753 118 aa1.89□□□□□ -2.11
CASC1-202ENST00000354189 CRCT1Q9UGL9 99 aa1.89□□□□□ -2.11
CASC1-202ENST00000354189 KRTAP10-12P60413 245 aa1.88□□□□□ -2.11
CASC1-202ENST00000354189 DNAH2Q9P225 4427 aa1.87□□□□□ -2.11
CASC1-202ENST00000354189 KRTAP10-7P60409 375 aaPredicted RBP1.87□□□□□ -2.11
CASC1-202ENST00000354189 HECTD4Q9Y4D8 3996 aa1.87□□□□□ -2.11
CASC1-202ENST00000354189 MGAM2Q2M2H8 2515 aa1.86□□□□□ -2.11
CASC1-202ENST00000354189 HYDINQ4G0P3 5121 aa1.84□□□□□ -2.11
CASC1-202ENST00000354189 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
CASC1-202ENST00000354189 DNAH5Q8TE73 4624 aa1.82□□□□□ -2.12
CASC1-202ENST00000354189 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
CASC1-202ENST00000354189 SACSQ9NZJ4 4579 aa1.82□□□□□ -2.12
CASC1-202ENST00000354189 KRTAP10-5P60370 271 aa1.82□□□□□ -2.12
CASC1-202ENST00000354189 FAT2Q9NYQ8 4349 aa1.81□□□□□ -2.12
CASC1-202ENST00000354189 PKD1P98161 4303 aa1.8□□□□□ -2.12
CASC1-202ENST00000354189 APOBP04114 4563 aaKnown RBP1.78□□□□□ -2.12
CASC1-202ENST00000354189 KRTAP8-1Q8IUC2 63 aa1.78□□□□□ -2.12
CASC1-202ENST00000354189 RYR2Q92736 4967 aa1.77□□□□□ -2.13
CASC1-202ENST00000354189 LCE3AQ5TA76 89 aa1.76□□□□□ -2.13
CASC1-202ENST00000354189 DYNC1H1Q14204 4646 aaKnown RBP1.76□□□□□ -2.13
CASC1-202ENST00000354189 LRP1BQ9NZR2 4599 aa1.76□□□□□ -2.13
CASC1-202ENST00000354189 LCE3EQ5T5B0 92 aa1.75□□□□□ -2.13
CASC1-202ENST00000354189 FLGP20930 4061 aaPredicted RBP1.74□□□□□ -2.13
CASC1-202ENST00000354189 VPS13BQ7Z7G8 4022 aa1.73□□□□□ -2.13
CASC1-202ENST00000354189 LRP1Q07954 4544 aaKnown RBP1.73□□□□□ -2.13
CASC1-202ENST00000354189 KMT2CQ8NEZ4 4911 aaKnown RBP1.73□□□□□ -2.13
CASC1-202ENST00000354189 RYR3Q15413 4870 aa1.71□□□□□ -2.13
CASC1-202ENST00000354189 M0R2T5 61 aa1.71□□□□□ -2.14
CASC1-202ENST00000354189 KRTAP5-8O75690 187 aa1.71□□□□□ -2.14
CASC1-202ENST00000354189 KRTAP2-3P0C7H8 128 aa1.71□□□□□ -2.14
CASC1-202ENST00000354189 KRTAP2-4Q9BYR9 128 aa1.71□□□□□ -2.14
CASC1-202ENST00000354189 KRTAP2-1Q9BYU5 128 aa1.71□□□□□ -2.14
CASC1-202ENST00000354189 SMR3BP02814 79 aaPredicted RBP1.71□□□□□ -2.14
CASC1-202ENST00000354189 PKHD1L1Q86WI1 4243 aa1.71□□□□□ -2.14
CASC1-202ENST00000354189 HSPG2P98160 4391 aa1.7□□□□□ -2.14
CASC1-202ENST00000354189 KRTAP10-4P60372 401 aaPredicted RBP1.7□□□□□ -2.14
CASC1-202ENST00000354189 PKHD1P08F94 4074 aa1.7□□□□□ -2.14
CASC1-202ENST00000354189 KRTAP12-3P60328 96 aa1.7□□□□□ -2.14
CASC1-202ENST00000354189 FAT1Q14517 4588 aa1.69□□□□□ -2.14
CASC1-202ENST00000354189 FAT3Q8TDW7 4589 aa1.69□□□□□ -2.14
CASC1-202ENST00000354189 KRTAP9-6A8MVA2 160 aa1.68□□□□□ -2.14
CASC1-202ENST00000354189 KRTAP4-4Q9BYR3 166 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms