RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 PKD1P98161 4303 aa6.48□□□□□ -1.37
CTNNB1-201ENST00000349496 KRTAP13-2Q52LG2 175 aa6.47□□□□□ -1.37
CTNNB1-201ENST00000349496 KMT2CQ8NEZ4 4911 aaKnown RBP6.41□□□□□ -1.38
CTNNB1-201ENST00000349496 C9orf92A6NGG3 77 aa6.4□□□□□ -1.38
CTNNB1-201ENST00000349496 SACSQ9NZJ4 4579 aa6.4□□□□□ -1.38
CTNNB1-201ENST00000349496 DYNC1H1Q14204 4646 aaKnown RBP6.38□□□□□ -1.39
CTNNB1-201ENST00000349496 MYCBP2O75592 4640 aa6.37□□□□□ -1.39
CTNNB1-201ENST00000349496 KRTAP13-4Q3LI77 160 aa6.36□□□□□ -1.39
CTNNB1-201ENST00000349496 KRTAP10-8P60410 259 aa6.33□□□□□ -1.4
CTNNB1-201ENST00000349496 LRP1Q07954 4544 aaKnown RBP6.33□□□□□ -1.4
CTNNB1-201ENST00000349496 KRTAP1-4P0C5Y4 121 aa6.33□□□□□ -1.4
CTNNB1-201ENST00000349496 KRTAP12-2P59991 146 aa6.33□□□□□ -1.4
CTNNB1-201ENST00000349496 KRTAP21-3Q3LHN1 58 aa6.29□□□□□ -1.4
CTNNB1-201ENST00000349496 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
CTNNB1-201ENST00000349496 R4GN34 69 aa6.26□□□□□ -1.41
CTNNB1-201ENST00000349496 APOBP04114 4563 aaKnown RBP6.26□□□□□ -1.41
CTNNB1-201ENST00000349496 XP32Q5T750 250 aa6.24□□□□□ -1.41
CTNNB1-201ENST00000349496 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
CTNNB1-201ENST00000349496 KRTAP10-6P60371 365 aaPredicted RBP6.19□□□□□ -1.42
CTNNB1-201ENST00000349496 FAT3Q8TDW7 4589 aa6.18□□□□□ -1.42
CTNNB1-201ENST00000349496 KRTAP12-1P59990 96 aa6.16□□□□□ -1.42
CTNNB1-201ENST00000349496 RYR2Q92736 4967 aa6.15□□□□□ -1.42
CTNNB1-201ENST00000349496 RYR3Q15413 4870 aa6.14□□□□□ -1.43
CTNNB1-201ENST00000349496 KIAA1109Q2LD37 5005 aa6.13□□□□□ -1.43
CTNNB1-201ENST00000349496 PKHD1L1Q86WI1 4243 aa6.11□□□□□ -1.43
CTNNB1-201ENST00000349496 HSPG2P98160 4391 aa6.1□□□□□ -1.43
CTNNB1-201ENST00000349496 KRTAP3-2Q9BYR7 98 aa6.09□□□□□ -1.43
CTNNB1-201ENST00000349496 LPAP08519 4548 aa6.05□□□□□ -1.44
CTNNB1-201ENST00000349496 KRTAP17-1Q9BYP8 105 aa6.03□□□□□ -1.44
CTNNB1-201ENST00000349496 M0QZ58 72 aa6.01□□□□□ -1.45
CTNNB1-201ENST00000349496 RYR1P21817 5038 aa6□□□□□ -1.45
CTNNB1-201ENST00000349496 KRTAP10-4P60372 401 aaPredicted RBP5.99□□□□□ -1.45
CTNNB1-201ENST00000349496 A0A1B0GVY2 172 aa5.99□□□□□ -1.45
CTNNB1-201ENST00000349496 EPPK1P58107 5090 aaKnown RBP5.98□□□□□ -1.45
CTNNB1-201ENST00000349496 LRP2P98164 4655 aa5.94□□□□□ -1.46
CTNNB1-201ENST00000349496 ABCA13Q86UQ4 5058 aa5.93□□□□□ -1.46
CTNNB1-201ENST00000349496 TNXBP22105 4242 aa5.92□□□□□ -1.46
CTNNB1-201ENST00000349496 PP632Q6XCG6 107 aa5.91□□□□□ -1.46
CTNNB1-201ENST00000349496 Q5VSD8 79 aa5.9□□□□□ -1.47
CTNNB1-201ENST00000349496 KRTAP3-3Q9BYR6 98 aa5.87□□□□□ -1.47
CTNNB1-201ENST00000349496 INE1O15225 51 aa5.86□□□□□ -1.47
CTNNB1-201ENST00000349496 MUC2Q02817 5179 aa5.81□□□□□ -1.48
CTNNB1-201ENST00000349496 KRTAP4-5Q9BYR2 181 aa5.75□□□□□ -1.49
CTNNB1-201ENST00000349496 RPS29P62273 56 aaKnown RBP5.73□□□□□ -1.49
CTNNB1-201ENST00000349496 MT1HL1P0DM35 61 aa5.66□□□□□ -1.5
CTNNB1-201ENST00000349496 KRTAP23-1A1A580 65 aa5.59□□□□□ -1.51
CTNNB1-201ENST00000349496 TNP1P09430 55 aa5.59□□□□□ -1.51
CTNNB1-201ENST00000349496 HERC2O95714 4834 aa5.58□□□□□ -1.52
CTNNB1-201ENST00000349496 HERC1Q15751 4861 aa5.54□□□□□ -1.52
CTNNB1-201ENST00000349496 FAT4Q6V0I7 4981 aa5.49□□□□□ -1.53
CTNNB1-201ENST00000349496 RNF213Q63HN8 5207 aa5.47□□□□□ -1.53
CTNNB1-201ENST00000349496 KRTAP4-1Q9BYQ7 146 aa5.44□□□□□ -1.54
CTNNB1-201ENST00000349496 LORP23490 312 aaPredicted RBP5.41□□□□□ -1.54
CTNNB1-201ENST00000349496 PCLOQ9Y6V0 5065 aa5.41□□□□□ -1.54
CTNNB1-201ENST00000349496 SPRR5A0A1B0GTR4 108 aa5.38□□□□□ -1.55
CTNNB1-201ENST00000349496 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
CTNNB1-201ENST00000349496 UBR4Q5T4S7 5183 aa5.29□□□□□ -1.56
CTNNB1-201ENST00000349496 HMCN2Q8NDA2 5059 aa5.19□□□□□ -1.58
CTNNB1-201ENST00000349496 BIRC6Q9NR09 4857 aa5.18□□□□□ -1.58
CTNNB1-201ENST00000349496 KRTAP19-2Q3LHN2 52 aa5.09□□□□□ -1.6
CTNNB1-201ENST00000349496 FLGP20930 4061 aaPredicted RBP5.05□□□□□ -1.6
CTNNB1-201ENST00000349496 M0R2T5 61 aa4.99□□□□□ -1.61
CTNNB1-201ENST00000349496 LCE3AQ5TA76 89 aa4.97□□□□□ -1.61
CTNNB1-201ENST00000349496 USH2AO75445 5202 aa4.93□□□□□ -1.62
CTNNB1-201ENST00000349496 LCE2CQ5TA81 110 aa4.87□□□□□ -1.63
CTNNB1-201ENST00000349496 KRTAP10-10P60014 251 aa4.83□□□□□ -1.64
CTNNB1-201ENST00000349496 KMT2DO14686 5537 aa4.79□□□□□ -1.64
CTNNB1-201ENST00000349496 FSIP2Q5CZC0 6907 aa4.78□□□□□ -1.64
CTNNB1-201ENST00000349496 MT1HP80294 61 aa4.76□□□□□ -1.65
CTNNB1-201ENST00000349496 MT1FP04733 61 aa4.75□□□□□ -1.65
CTNNB1-201ENST00000349496 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
CTNNB1-201ENST00000349496 KRTAP19-1Q8IUB9 90 aa4.74□□□□□ -1.65
CTNNB1-201ENST00000349496 MT2AP02795 61 aa4.68□□□□□ -1.66
CTNNB1-201ENST00000349496 KRTAP9-8Q9BYQ0 159 aa4.62□□□□□ -1.67
CTNNB1-201ENST00000349496 KRTAP8-1Q8IUC2 63 aa4.61□□□□□ -1.67
CTNNB1-201ENST00000349496 SPRR2GQ9BYE4 73 aa4.59□□□□□ -1.68
CTNNB1-201ENST00000349496 KRTAP10-12P60413 245 aa4.53□□□□□ -1.68
CTNNB1-201ENST00000349496 MT1BP07438 61 aa4.49□□□□□ -1.69
CTNNB1-201ENST00000349496 KRTAP10-7P60409 375 aaPredicted RBP4.47□□□□□ -1.69
CTNNB1-201ENST00000349496 MT1XP80297 61 aa4.46□□□□□ -1.69
CTNNB1-201ENST00000349496 KRTAP10-5P60370 271 aa4.46□□□□□ -1.7
CTNNB1-201ENST00000349496 KRTAP9-3Q9BYQ3 159 aa4.39□□□□□ -1.71
CTNNB1-201ENST00000349496 KRTAP12-4P60329 112 aa4.38□□□□□ -1.71
CTNNB1-201ENST00000349496 LCE3CQ5T5A8 94 aa4.37□□□□□ -1.71
CTNNB1-201ENST00000349496 LCE2BO14633 110 aa4.36□□□□□ -1.71
CTNNB1-201ENST00000349496 KRTAP4-8A0A0G2JLE6 195 aa4.35□□□□□ -1.71
CTNNB1-201ENST00000349496 KRTAP4-8Q9BYQ9 185 aa4.35□□□□□ -1.71
CTNNB1-201ENST00000349496 KRTAP19-8Q3LI54 63 aa4.34□□□□□ -1.71
CTNNB1-201ENST00000349496 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
CTNNB1-201ENST00000349496 SSPOA2VEC9 5147 aa4.25□□□□□ -1.73
CTNNB1-201ENST00000349496 KRTAP19-5Q3LI72 72 aa4.23□□□□□ -1.73
CTNNB1-201ENST00000349496 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
CTNNB1-201ENST00000349496 MUC12Q9UKN1 5478 aa4.21□□□□□ -1.74
CTNNB1-201ENST00000349496 KRTAP2-3P0C7H8 128 aa4.2□□□□□ -1.74
CTNNB1-201ENST00000349496 KRTAP2-4Q9BYR9 128 aa4.2□□□□□ -1.74
CTNNB1-201ENST00000349496 KRTAP2-1Q9BYU5 128 aa4.2□□□□□ -1.74
CTNNB1-201ENST00000349496 FCGBPQ9Y6R7 5405 aaPredicted RBP4.16□□□□□ -1.74
CTNNB1-201ENST00000349496 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.74
CTNNB1-201ENST00000349496 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
CTNNB1-201ENST00000349496 LCE2AQ5TA79 106 aaPredicted RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms