RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 KRTAP13-4Q3LI77 160 aa8.02□□□□□ -1.13
PTBP1-201ENST00000349038 RPS29P62273 56 aaKnown RBP8□□□□□ -1.13
PTBP1-201ENST00000349038 MYCBP2O75592 4640 aa7.87□□□□□ -1.15
PTBP1-201ENST00000349038 A0A0A0MQY5 61 aa7.86□□□□□ -1.15
PTBP1-201ENST00000349038 A0A1B0GVY2 172 aa7.85□□□□□ -1.15
PTBP1-201ENST00000349038 EPPK1P58107 5090 aaKnown RBP7.84□□□□□ -1.15
PTBP1-201ENST00000349038 S4R3F8 94 aa7.84□□□□□ -1.15
PTBP1-201ENST00000349038 KRTAP12-2P59991 146 aa7.83□□□□□ -1.16
PTBP1-201ENST00000349038 KRTAP10-6P60371 365 aaPredicted RBP7.83□□□□□ -1.16
PTBP1-201ENST00000349038 FAT1Q14517 4588 aa7.83□□□□□ -1.16
PTBP1-201ENST00000349038 PKHD1L1Q86WI1 4243 aa7.83□□□□□ -1.16
PTBP1-201ENST00000349038 KRTAP15-1Q3LI76 137 aa7.82□□□□□ -1.16
PTBP1-201ENST00000349038 BIRC6Q9NR09 4857 aa7.8□□□□□ -1.16
PTBP1-201ENST00000349038 PKHD1P08F94 4074 aa7.74□□□□□ -1.17
PTBP1-201ENST00000349038 DYNC1H1Q14204 4646 aaKnown RBP7.74□□□□□ -1.17
PTBP1-201ENST00000349038 APOBP04114 4563 aaKnown RBP7.73□□□□□ -1.17
PTBP1-201ENST00000349038 KRTAP10-8P60410 259 aa7.71□□□□□ -1.18
PTBP1-201ENST00000349038 KRTAP10-4P60372 401 aaPredicted RBP7.7□□□□□ -1.18
PTBP1-201ENST00000349038 KRTAP3-3Q9BYR6 98 aa7.69□□□□□ -1.18
PTBP1-201ENST00000349038 KRTAP3-2Q9BYR7 98 aa7.68□□□□□ -1.18
PTBP1-201ENST00000349038 LUZP6Q538Z0 58 aa7.66□□□□□ -1.18
PTBP1-201ENST00000349038 KRTAP12-1P59990 96 aa7.6□□□□□ -1.19
PTBP1-201ENST00000349038 HERC2O95714 4834 aa7.59□□□□□ -1.19
PTBP1-201ENST00000349038 RYR1P21817 5038 aa7.55□□□□□ -1.2
PTBP1-201ENST00000349038 HSPG2P98160 4391 aa7.55□□□□□ -1.2
PTBP1-201ENST00000349038 LRP1Q07954 4544 aaKnown RBP7.54□□□□□ -1.2
PTBP1-201ENST00000349038 KIAA1109Q2LD37 5005 aa7.53□□□□□ -1.2
PTBP1-201ENST00000349038 FAT3Q8TDW7 4589 aa7.53□□□□□ -1.2
PTBP1-201ENST00000349038 M0QZ58 72 aa7.5□□□□□ -1.21
PTBP1-201ENST00000349038 PLAC4Q8WY50 150 aa7.47□□□□□ -1.21
PTBP1-201ENST00000349038 XP32Q5T750 250 aa7.44□□□□□ -1.22
PTBP1-201ENST00000349038 TNXBP22105 4242 aa7.43□□□□□ -1.22
PTBP1-201ENST00000349038 KRTAP17-1Q9BYP8 105 aa7.42□□□□□ -1.22
PTBP1-201ENST00000349038 R4GN34 69 aa7.42□□□□□ -1.22
PTBP1-201ENST00000349038 LPAP08519 4548 aa7.4□□□□□ -1.23
PTBP1-201ENST00000349038 KRTAP4-5Q9BYR2 181 aa7.36□□□□□ -1.23
PTBP1-201ENST00000349038 Q5VSD8 79 aa7.35□□□□□ -1.23
PTBP1-201ENST00000349038 ABCA13Q86UQ4 5058 aa7.32□□□□□ -1.24
PTBP1-201ENST00000349038 PCLOQ9Y6V0 5065 aa7.3□□□□□ -1.24
PTBP1-201ENST00000349038 LRP2P98164 4655 aa7.27□□□□□ -1.25
PTBP1-201ENST00000349038 CAMK2N1Q7Z7J9 78 aa7.24□□□□□ -1.25
PTBP1-201ENST00000349038 LORP23490 312 aaPredicted RBP7.18□□□□□ -1.26
PTBP1-201ENST00000349038 MT1HL1P0DM35 61 aa7.09□□□□□ -1.27
PTBP1-201ENST00000349038 J3QL48 77 aa7.03□□□□□ -1.28
PTBP1-201ENST00000349038 HERC1Q15751 4861 aa6.97□□□□□ -1.29
PTBP1-201ENST00000349038 MUC2Q02817 5179 aa6.85□□□□□ -1.31
PTBP1-201ENST00000349038 HMCN2Q8NDA2 5059 aa6.82□□□□□ -1.32
PTBP1-201ENST00000349038 PP632Q6XCG6 107 aa6.79□□□□□ -1.32
PTBP1-201ENST00000349038 MUC17Q685J3 4493 aa6.76□□□□□ -1.33
PTBP1-201ENST00000349038 TNP1P09430 55 aa6.74□□□□□ -1.33
PTBP1-201ENST00000349038 SEC61BP60468 96 aaKnown RBP6.7□□□□□ -1.34
PTBP1-201ENST00000349038 KRTAP4-1Q9BYQ7 146 aa6.68□□□□□ -1.34
PTBP1-201ENST00000349038 KRTAP19-2Q3LHN2 52 aa6.64□□□□□ -1.35
PTBP1-201ENST00000349038 UBR4Q5T4S7 5183 aa6.52□□□□□ -1.37
PTBP1-201ENST00000349038 FAT4Q6V0I7 4981 aa6.47□□□□□ -1.37
PTBP1-201ENST00000349038 KRTAP23-1A1A580 65 aa6.41□□□□□ -1.38
PTBP1-201ENST00000349038 FLGP20930 4061 aaPredicted RBP6.4□□□□□ -1.38
PTBP1-201ENST00000349038 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
PTBP1-201ENST00000349038 LCE3AQ5TA76 89 aa6.37□□□□□ -1.39
PTBP1-201ENST00000349038 RNF213Q63HN8 5207 aa6.36□□□□□ -1.39
PTBP1-201ENST00000349038 SPRR5A0A1B0GTR4 108 aa6.35□□□□□ -1.39
PTBP1-201ENST00000349038 M0R2T5 61 aa6.35□□□□□ -1.39
PTBP1-201ENST00000349038 SPRR2GQ9BYE4 73 aa6.16□□□□□ -1.42
PTBP1-201ENST00000349038 LCE2AQ5TA79 106 aaPredicted RBP6.13□□□□□ -1.43
PTBP1-201ENST00000349038 KRTAP19-1Q8IUB9 90 aa6.12□□□□□ -1.43
PTBP1-201ENST00000349038 LCE2CQ5TA81 110 aa6.11□□□□□ -1.43
PTBP1-201ENST00000349038 INE1O15225 51 aa6.1□□□□□ -1.43
PTBP1-201ENST00000349038 KRTAP10-10P60014 251 aa6.07□□□□□ -1.44
PTBP1-201ENST00000349038 KRTAP12-3P60328 96 aa5.98□□□□□ -1.45
PTBP1-201ENST00000349038 KMT2DO14686 5537 aa5.94□□□□□ -1.46
PTBP1-201ENST00000349038 MT1HP80294 61 aa5.94□□□□□ -1.46
PTBP1-201ENST00000349038 KRTAP8-1Q8IUC2 63 aa5.92□□□□□ -1.46
PTBP1-201ENST00000349038 MT1FP04733 61 aa5.89□□□□□ -1.47
PTBP1-201ENST00000349038 MT2AP02795 61 aa5.88□□□□□ -1.47
PTBP1-201ENST00000349038 KRTAP10-12P60413 245 aa5.87□□□□□ -1.47
PTBP1-201ENST00000349038 KRTAP19-8Q3LI54 63 aa5.85□□□□□ -1.47
PTBP1-201ENST00000349038 KRTAP9-8Q9BYQ0 159 aa5.82□□□□□ -1.48
PTBP1-201ENST00000349038 USH2AO75445 5202 aa5.81□□□□□ -1.48
PTBP1-201ENST00000349038 KRTAP10-5P60370 271 aa5.8□□□□□ -1.48
PTBP1-201ENST00000349038 LCE2DQ5TA82 110 aaPredicted RBP5.79□□□□□ -1.48
PTBP1-201ENST00000349038 KRTAP9-2Q9BYQ4 174 aa5.78□□□□□ -1.48
PTBP1-201ENST00000349038 KRTAP10-7P60409 375 aaPredicted RBP5.78□□□□□ -1.48
PTBP1-201ENST00000349038 MT1XP80297 61 aa5.78□□□□□ -1.48
PTBP1-201ENST00000349038 MT1BP07438 61 aa5.77□□□□□ -1.49
PTBP1-201ENST00000349038 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
PTBP1-201ENST00000349038 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
PTBP1-201ENST00000349038 KRTAP9-3Q9BYQ3 159 aa5.56□□□□□ -1.52
PTBP1-201ENST00000349038 KRTAP9-6A0A140TA67 174 aa5.55□□□□□ -1.52
PTBP1-201ENST00000349038 OBSCNQ5VST9 7968 aa5.54□□□□□ -1.52
PTBP1-201ENST00000349038 LCE3CQ5T5A8 94 aa5.54□□□□□ -1.52
PTBP1-201ENST00000349038 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
PTBP1-201ENST00000349038 KRTAP4-8Q9BYQ9 185 aa5.51□□□□□ -1.53
PTBP1-201ENST00000349038 KRTAP9-6A8MVA2 160 aa5.5□□□□□ -1.53
PTBP1-201ENST00000349038 CRCT1Q9UGL9 99 aa5.5□□□□□ -1.53
PTBP1-201ENST00000349038 FSIP2Q5CZC0 6907 aa5.46□□□□□ -1.53
PTBP1-201ENST00000349038 DSTQ03001 7570 aaKnown RBP5.44□□□□□ -1.54
PTBP1-201ENST00000349038 SYNE1Q8NF91 8797 aaKnown RBP5.4□□□□□ -1.54
PTBP1-201ENST00000349038 LCE2BO14633 110 aa5.39□□□□□ -1.55
PTBP1-201ENST00000349038 FCGBPQ9Y6R7 5405 aaPredicted RBP5.36□□□□□ -1.55
PTBP1-201ENST00000349038 SSPOA2VEC9 5147 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms