RNA–Protein interactions for RNA: ENST00000345425.6

GIPC1-201, Transcript of GIPC PDZ domain containing family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIPC1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIPC1-201ENST00000345425 LCA10Q71F78 164 aa13.45□□□□□ -0.26
GIPC1-201ENST00000345425 ACYP2P14621 99 aa13.42□□□□□ -0.26
GIPC1-201ENST00000345425 KRTAP10-6P60371 365 aaPredicted RBP13.4□□□□□ -0.26
GIPC1-201ENST00000345425 LORP23490 312 aaPredicted RBP13.34□□□□□ -0.27
GIPC1-201ENST00000345425 CSAG1Q6PB30 78 aa13.34□□□□□ -0.27
GIPC1-201ENST00000345425 RPS28P62857 69 aaKnown RBP13.33□□□□□ -0.28
GIPC1-201ENST00000345425 KRTAP3-3Q9BYR6 98 aa13.32□□□□□ -0.28
GIPC1-201ENST00000345425 ATP5EP56381 51 aaPredicted RBP13.3□□□□□ -0.28
GIPC1-201ENST00000345425 CHKB-CPT1BH3BT56 60 aa13.19□□□□□ -0.3
GIPC1-201ENST00000345425 KRTAP9-8Q9BYQ0 159 aa13.17□□□□□ -0.3
GIPC1-201ENST00000345425 SERP1Q9Y6X1 66 aa13.17□□□□□ -0.3
GIPC1-201ENST00000345425 SPTSSBQ8NFR3 76 aa13.11□□□□□ -0.31
GIPC1-201ENST00000345425 COA5Q86WW8 74 aa13.09□□□□□ -0.31
GIPC1-201ENST00000345425 MT2AP02795 61 aa13.08□□□□□ -0.32
GIPC1-201ENST00000345425 MT1FP04733 61 aa12.99□□□□□ -0.33
GIPC1-201ENST00000345425 KRTAP10-10P60014 251 aa12.99□□□□□ -0.33
GIPC1-201ENST00000345425 H0YAA0 97 aa12.97□□□□□ -0.33
GIPC1-201ENST00000345425 SMIM26A0A096LP01 95 aa12.88□□□□□ -0.35
GIPC1-201ENST00000345425 ADM2Q7Z4H4 148 aa12.84□□□□□ -0.35
GIPC1-201ENST00000345425 LCE2DQ5TA82 110 aaPredicted RBP12.76□□□□□ -0.37
GIPC1-201ENST00000345425 KRTAP9-3Q9BYQ3 159 aa12.74□□□□□ -0.37
GIPC1-201ENST00000345425 CRIPTQ9P021 101 aa12.67□□□□□ -0.38
GIPC1-201ENST00000345425 KRTAP3-2Q9BYR7 98 aa12.66□□□□□ -0.38
GIPC1-201ENST00000345425 P0C880 135 aa12.64□□□□□ -0.39
GIPC1-201ENST00000345425 KRTAP9-2Q9BYQ4 174 aa12.6□□□□□ -0.39
GIPC1-201ENST00000345425 SEC61GP60059 68 aa12.58□□□□□ -0.39
GIPC1-201ENST00000345425 Q1T7F1 81 aa12.55□□□□□ -0.4
GIPC1-201ENST00000345425 SPRR2GQ9BYE4 73 aa12.51□□□□□ -0.41
GIPC1-201ENST00000345425 KRTAP19-1Q8IUB9 90 aa12.51□□□□□ -0.41
GIPC1-201ENST00000345425 R4GN34 69 aa12.48□□□□□ -0.41
GIPC1-201ENST00000345425 LCE2BO14633 110 aa12.47□□□□□ -0.41
GIPC1-201ENST00000345425 V9GYY9 64 aa12.46□□□□□ -0.42
GIPC1-201ENST00000345425 A0A1B0GU69 56 aa12.43□□□□□ -0.42
GIPC1-201ENST00000345425 M0QZ58 72 aa12.4□□□□□ -0.42
GIPC1-201ENST00000345425 LINC01558Q9Y6Z2 57 aa12.38□□□□□ -0.43
GIPC1-201ENST00000345425 PRR15LQ9BU68 103 aa12.33□□□□□ -0.44
GIPC1-201ENST00000345425 KRTAP19-8Q3LI54 63 aa12.28□□□□□ -0.44
GIPC1-201ENST00000345425 A0A1B0GU33 70 aa12.25□□□□□ -0.45
GIPC1-201ENST00000345425 PSPHP1O15172 72 aa12.25□□□□□ -0.45
GIPC1-201ENST00000345425 USH2AO75445 5202 aa12.24□□□□□ -0.45
GIPC1-201ENST00000345425 Q5VV11 94 aa12.24□□□□□ -0.45
GIPC1-201ENST00000345425 SVIPQ8NHG7 77 aa12.21□□□□□ -0.45
GIPC1-201ENST00000345425 LINC01554Q52M75 96 aa12.17□□□□□ -0.46
GIPC1-201ENST00000345425 KRTAP13-4Q3LI77 160 aa12.15□□□□□ -0.46
GIPC1-201ENST00000345425 MT1BP07438 61 aa12.14□□□□□ -0.47
GIPC1-201ENST00000345425 BRK1Q8WUW1 75 aa12.13□□□□□ -0.47
GIPC1-201ENST00000345425 FSIP2Q5CZC0 6907 aa12.12□□□□□ -0.47
GIPC1-201ENST00000345425 PRO0628Q9UI54 55 aa12.1□□□□□ -0.47
GIPC1-201ENST00000345425 CRCT1Q9UGL9 99 aa12.06□□□□□ -0.48
GIPC1-201ENST00000345425 SPATA8Q6RVD6 105 aa12.05□□□□□ -0.48
GIPC1-201ENST00000345425 PLAC4Q8WY50 150 aa12□□□□□ -0.49
GIPC1-201ENST00000345425 A6NN06 94 aa11.96□□□□□ -0.49
GIPC1-201ENST00000345425 SSPOA2VEC9 5147 aa11.95□□□□□ -0.5
GIPC1-201ENST00000345425 UQCR11O14957 56 aa11.94□□□□□ -0.5
GIPC1-201ENST00000345425 KRTAP19-6Q3LI70 58 aa11.92□□□□□ -0.5
GIPC1-201ENST00000345425 A0A0D9SG42 100 aa11.9□□□□□ -0.5
GIPC1-201ENST00000345425 KRTAP9-6A0A140TA67 174 aa11.89□□□□□ -0.51
GIPC1-201ENST00000345425 A6NED7 52 aa11.89□□□□□ -0.51
GIPC1-201ENST00000345425 CDC42SE1Q9NRR8 79 aa11.78□□□□□ -0.52
GIPC1-201ENST00000345425 A8MU10 97 aa11.77□□□□□ -0.53
GIPC1-201ENST00000345425 MIR22HGQ0VDD5 57 aa11.73□□□□□ -0.53
GIPC1-201ENST00000345425 KRTAP10-5P60370 271 aa11.7□□□□□ -0.54
GIPC1-201ENST00000345425 SPINT4Q6UDR6 99 aa11.69□□□□□ -0.54
GIPC1-201ENST00000345425 KRTAP12-1P59990 96 aa11.68□□□□□ -0.54
GIPC1-201ENST00000345425 PRO2289Q9P1D8 64 aa11.67□□□□□ -0.54
GIPC1-201ENST00000345425 KRTAP12-2P59991 146 aa11.61□□□□□ -0.55
GIPC1-201ENST00000345425 MT1XP80297 61 aa11.61□□□□□ -0.55
GIPC1-201ENST00000345425 CAMK2N1Q7Z7J9 78 aa11.61□□□□□ -0.55
GIPC1-201ENST00000345425 FCGBPQ9Y6R7 5405 aaPredicted RBP11.58□□□□□ -0.56
GIPC1-201ENST00000345425 PMAIP1Q13794 54 aa11.44□□□□□ -0.58
GIPC1-201ENST00000345425 K7ERS5 55 aa11.39□□□□□ -0.59
GIPC1-201ENST00000345425 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.18□□□□□ -0.62
GIPC1-201ENST00000345425 KTN1-AS1Q86SY8 53 aa11.17□□□□□ -0.62
GIPC1-201ENST00000345425 KRTAP10-7P60409 375 aaPredicted RBP11.09□□□□□ -0.63
GIPC1-201ENST00000345425 C10orf95Q9H7T3 257 aa11.08□□□□□ -0.64
GIPC1-201ENST00000345425 MACF1Q9UPN3 7388 aaKnown RBP11.07□□□□□ -0.64
GIPC1-201ENST00000345425 KRTAP10-12P60413 245 aa11.04□□□□□ -0.64
GIPC1-201ENST00000345425 TNP1P09430 55 aa10.93□□□□□ -0.66
GIPC1-201ENST00000345425 KRTAP4-8A0A0G2JLE6 195 aa10.81□□□□□ -0.68
GIPC1-201ENST00000345425 KRTAP4-8Q9BYQ9 185 aa10.81□□□□□ -0.68
GIPC1-201ENST00000345425 KMT2DO14686 5537 aa10.8□□□□□ -0.68
GIPC1-201ENST00000345425 KRTAP9-7A8MTY7 169 aa10.8□□□□□ -0.68
GIPC1-201ENST00000345425 KRTAP8-1Q8IUC2 63 aa10.77□□□□□ -0.68
GIPC1-201ENST00000345425 SYNE2Q8WXH0 6885 aaKnown RBP10.77□□□□□ -0.68
GIPC1-201ENST00000345425 KRTAP25-1Q3LHN0 102 aa10.75□□□□□ -0.69
GIPC1-201ENST00000345425 KRTAP6-3Q3LI67 103 aa10.75□□□□□ -0.69
GIPC1-201ENST00000345425 ROMO1P60602 79 aa10.74□□□□□ -0.69
GIPC1-201ENST00000345425 PRAC1Q96KF2 57 aa10.69□□□□□ -0.7
GIPC1-201ENST00000345425 KRTAP5-9P26371 169 aa10.62□□□□□ -0.71
GIPC1-201ENST00000345425 LCE3AQ5TA76 89 aa10.54□□□□□ -0.72
GIPC1-201ENST00000345425 SPRR2FQ96RM1 72 aa10.52□□□□□ -0.72
GIPC1-201ENST00000345425 KRTAP23-1A1A580 65 aa10.39□□□□□ -0.75
GIPC1-201ENST00000345425 KRTAP19-7Q3SYF9 63 aa10.35□□□□□ -0.75
GIPC1-201ENST00000345425 KRTAP19-5Q3LI72 72 aa10.34□□□□□ -0.75
GIPC1-201ENST00000345425 MUC12Q9UKN1 5478 aa10.27□□□□□ -0.77
GIPC1-201ENST00000345425 PP632Q6XCG6 107 aa10.24□□□□□ -0.77
GIPC1-201ENST00000345425 MT1EP04732 61 aa10.23□□□□□ -0.77
GIPC1-201ENST00000345425 SPRR2EP22531 72 aa10.16□□□□□ -0.78
GIPC1-201ENST00000345425 SPRR2BP35325 72 aa10.16□□□□□ -0.78
GIPC1-201ENST00000345425 SPRR2AP35326 72 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms