RNA–Protein interactions for RNA: ENST00000345425.6

GIPC1-201, Transcript of GIPC PDZ domain containing family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIPC1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIPC1-201ENST00000345425 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.8■■■□□ 2.042e-9■■■■■ 44.1
GIPC1-201ENST00000345425 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.98■■■□□ 2.239e-9■□□□□ 9.6
GIPC1-201ENST00000345425 UPF1Q92900 1129 aaKnown RBP eCLIP35.72■■■■□ 3.311e-8■■■■■ 38.3
GIPC1-201ENST00000345425 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.78■■■□□ 2.842e-8■■■■■ 51
GIPC1-201ENST00000345425 LARP4Q71RC2 724 aaKnown RBP eCLIP26.35■■□□□ 1.813e-8■□□□□ 10.7
GIPC1-201ENST00000345425 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.83■■■□□ 2.374e-8■■■■■ 174.9
GIPC1-201ENST00000345425 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.2■■■□□ 2.434e-8■■■■■ 33.1
GIPC1-201ENST00000345425 PCBP2Q15366 365 aaKnown RBP eCLIP26.86■■□□□ 1.898e-8■■■□□ 15.4
GIPC1-201ENST00000345425 PABPC4Q13310 644 aaKnown RBP eCLIP32.32■■■□□ 2.772e-7■■□□□ 12
GIPC1-201ENST00000345425 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.87■■□□□ 1.256e-7■□□□□ 9.8
GIPC1-201ENST00000345425 DDX6P26196 483 aaKnown RBP eCLIP29.05■■■□□ 2.247e-7■■■■■ 53.3
GIPC1-201ENST00000345425 PPIGQ13427 754 aaKnown RBP eCLIP30.36■■■□□ 2.451e-6■■■■□ 21
GIPC1-201ENST00000345425 ILF3Q12906 894 aaKnown RBP eCLIP27.3■■□□□ 1.962e-6■■■■□ 21.4
GIPC1-201ENST00000345425 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.25■■■□□ 2.593e-6■■■■□ 19.8
GIPC1-201ENST00000345425 ZC3H11AO75152 810 aaKnown RBP eCLIP29.95■■■□□ 2.389e-6■■■■□ 20.6
Retrieved 15 of 15 RNA–protein pairs in 5.2 ms