RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 RPL37P61927 97 aaKnown RBP4.61□□□□□ -1.67
SKAP2-201ENST00000345317 A0A0A0MQY5 61 aa4.61□□□□□ -1.67
SKAP2-201ENST00000345317 S4R3F8 94 aa4.6□□□□□ -1.67
SKAP2-201ENST00000345317 RYR3Q15413 4870 aa4.59□□□□□ -1.67
SKAP2-201ENST00000345317 KRTAP13-3Q3SY46 172 aa4.59□□□□□ -1.68
SKAP2-201ENST00000345317 SEC61BP60468 96 aaKnown RBP4.58□□□□□ -1.68
SKAP2-201ENST00000345317 LCE2DQ5TA82 110 aaPredicted RBP4.58□□□□□ -1.68
SKAP2-201ENST00000345317 RYR1P21817 5038 aa4.57□□□□□ -1.68
SKAP2-201ENST00000345317 H1FX-AS1Q4G0G2 97 aa4.57□□□□□ -1.68
SKAP2-201ENST00000345317 APOBP04114 4563 aaKnown RBP4.57□□□□□ -1.68
SKAP2-201ENST00000345317 MYCBP2O75592 4640 aa4.57□□□□□ -1.68
SKAP2-201ENST00000345317 LRP1Q07954 4544 aaKnown RBP4.56□□□□□ -1.68
SKAP2-201ENST00000345317 H0YAA0 97 aa4.56□□□□□ -1.68
SKAP2-201ENST00000345317 RYR2Q92736 4967 aa4.56□□□□□ -1.68
SKAP2-201ENST00000345317 P0C880 135 aa4.53□□□□□ -1.68
SKAP2-201ENST00000345317 FAT2Q9NYQ8 4349 aa4.52□□□□□ -1.69
SKAP2-201ENST00000345317 M0R2T5 61 aa4.52□□□□□ -1.69
SKAP2-201ENST00000345317 FAT3Q8TDW7 4589 aa4.52□□□□□ -1.69
SKAP2-201ENST00000345317 MT1HL1P0DM35 61 aa4.52□□□□□ -1.69
SKAP2-201ENST00000345317 PKD1P98161 4303 aa4.48□□□□□ -1.69
SKAP2-201ENST00000345317 LUZP6Q538Z0 58 aa4.48□□□□□ -1.69
SKAP2-201ENST00000345317 KRTAP17-1Q9BYP8 105 aa4.48□□□□□ -1.69
SKAP2-201ENST00000345317 TPRXLQ17RH7 258 aa4.46□□□□□ -1.69
SKAP2-201ENST00000345317 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.7
SKAP2-201ENST00000345317 KRTAP3-1Q9BYR8 98 aa4.43□□□□□ -1.7
SKAP2-201ENST00000345317 R4GN34 69 aa4.42□□□□□ -1.7
SKAP2-201ENST00000345317 EPPK1P58107 5090 aaKnown RBP4.4□□□□□ -1.7
SKAP2-201ENST00000345317 M0QZ58 72 aa4.4□□□□□ -1.71
SKAP2-201ENST00000345317 HSPG2P98160 4391 aa4.35□□□□□ -1.71
SKAP2-201ENST00000345317 CAMK2N1Q7Z7J9 78 aa4.33□□□□□ -1.72
SKAP2-201ENST00000345317 HERC2O95714 4834 aa4.32□□□□□ -1.72
SKAP2-201ENST00000345317 LRP2P98164 4655 aa4.3□□□□□ -1.72
SKAP2-201ENST00000345317 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
SKAP2-201ENST00000345317 LPAP08519 4548 aa4.22□□□□□ -1.73
SKAP2-201ENST00000345317 ABCA13Q86UQ4 5058 aa4.22□□□□□ -1.73
SKAP2-201ENST00000345317 KRTAP3-3Q9BYR6 98 aa4.2□□□□□ -1.74
SKAP2-201ENST00000345317 PKHD1L1Q86WI1 4243 aa4.18□□□□□ -1.74
SKAP2-201ENST00000345317 KRTAP13-4Q3LI77 160 aa4.17□□□□□ -1.74
SKAP2-201ENST00000345317 PLAC4Q8WY50 150 aa4.17□□□□□ -1.74
SKAP2-201ENST00000345317 KRTAP4-1Q9BYQ7 146 aa4.16□□□□□ -1.74
SKAP2-201ENST00000345317 KRTAP10-6P60371 365 aaPredicted RBP4.16□□□□□ -1.74
SKAP2-201ENST00000345317 BIRC6Q9NR09 4857 aa4.15□□□□□ -1.75
SKAP2-201ENST00000345317 KRTAP12-2P59991 146 aa4.13□□□□□ -1.75
SKAP2-201ENST00000345317 KRTAP10-10P60014 251 aa4.12□□□□□ -1.75
SKAP2-201ENST00000345317 TNXBP22105 4242 aa4.1□□□□□ -1.75
SKAP2-201ENST00000345317 HERC1Q15751 4861 aa4.1□□□□□ -1.75
SKAP2-201ENST00000345317 KRTAP3-2Q9BYR7 98 aa4.1□□□□□ -1.75
SKAP2-201ENST00000345317 MUC2Q02817 5179 aa4.07□□□□□ -1.76
SKAP2-201ENST00000345317 KRTAP12-1P59990 96 aa4.05□□□□□ -1.76
SKAP2-201ENST00000345317 LORP23490 312 aaPredicted RBP4.04□□□□□ -1.76
SKAP2-201ENST00000345317 RNF213Q63HN8 5207 aa4.02□□□□□ -1.77
SKAP2-201ENST00000345317 PCLOQ9Y6V0 5065 aa3.99□□□□□ -1.77
SKAP2-201ENST00000345317 UBR4Q5T4S7 5183 aa3.94□□□□□ -1.78
SKAP2-201ENST00000345317 FAT4Q6V0I7 4981 aa3.91□□□□□ -1.78
SKAP2-201ENST00000345317 TNP1P09430 55 aa3.91□□□□□ -1.78
SKAP2-201ENST00000345317 PP632Q6XCG6 107 aa3.9□□□□□ -1.79
SKAP2-201ENST00000345317 MT1HP80294 61 aa3.84□□□□□ -1.8
SKAP2-201ENST00000345317 HMCN2Q8NDA2 5059 aa3.82□□□□□ -1.8
SKAP2-201ENST00000345317 MT2AP02795 61 aa3.75□□□□□ -1.81
SKAP2-201ENST00000345317 MT1FP04733 61 aa3.74□□□□□ -1.81
SKAP2-201ENST00000345317 FSIP2Q5CZC0 6907 aa3.73□□□□□ -1.81
SKAP2-201ENST00000345317 LCE2CQ5TA81 110 aa3.73□□□□□ -1.81
SKAP2-201ENST00000345317 PRO2289Q9P1D8 64 aa3.72□□□□□ -1.81
SKAP2-201ENST00000345317 KRTAP19-2Q3LHN2 52 aa3.71□□□□□ -1.81
SKAP2-201ENST00000345317 MUC17Q685J3 4493 aa3.71□□□□□ -1.82
SKAP2-201ENST00000345317 FLGP20930 4061 aaPredicted RBP3.66□□□□□ -1.82
SKAP2-201ENST00000345317 KRTAP19-1Q8IUB9 90 aa3.63□□□□□ -1.83
SKAP2-201ENST00000345317 SPRR2GQ9BYE4 73 aa3.61□□□□□ -1.83
SKAP2-201ENST00000345317 KRTAP9-8Q9BYQ0 159 aa3.6□□□□□ -1.83
SKAP2-201ENST00000345317 INE1O15225 51 aa3.6□□□□□ -1.83
SKAP2-201ENST00000345317 LCE2AQ5TA79 106 aaPredicted RBP3.59□□□□□ -1.83
SKAP2-201ENST00000345317 LCE3AQ5TA76 89 aa3.56□□□□□ -1.84
SKAP2-201ENST00000345317 LCE2BO14633 110 aa3.56□□□□□ -1.84
SKAP2-201ENST00000345317 KRTAP10-12P60413 245 aa3.55□□□□□ -1.84
SKAP2-201ENST00000345317 USH2AO75445 5202 aa3.5□□□□□ -1.85
SKAP2-201ENST00000345317 LOC100996750A0A140TA64 210 aa3.5□□□□□ -1.85
SKAP2-201ENST00000345317 KRTAP4-6Q9BYQ5 205 aa3.5□□□□□ -1.85
SKAP2-201ENST00000345317 MT1BP07438 61 aa3.47□□□□□ -1.85
SKAP2-201ENST00000345317 KRTAP9-3Q9BYQ3 159 aa3.46□□□□□ -1.86
SKAP2-201ENST00000345317 KRTAP12-3P60328 96 aa3.44□□□□□ -1.86
SKAP2-201ENST00000345317 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
SKAP2-201ENST00000345317 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
SKAP2-201ENST00000345317 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
SKAP2-201ENST00000345317 MT1XP80297 61 aa3.41□□□□□ -1.86
SKAP2-201ENST00000345317 SPRR5A0A1B0GTR4 108 aa3.41□□□□□ -1.86
SKAP2-201ENST00000345317 KRTAP10-5P60370 271 aa3.4□□□□□ -1.87
SKAP2-201ENST00000345317 KRTAP4-8A0A0G2JLE6 195 aa3.35□□□□□ -1.87
SKAP2-201ENST00000345317 KRTAP4-8Q9BYQ9 185 aa3.35□□□□□ -1.87
SKAP2-201ENST00000345317 CRCT1Q9UGL9 99 aa3.32□□□□□ -1.88
SKAP2-201ENST00000345317 KRTAP19-5Q3LI72 72 aa3.31□□□□□ -1.88
SKAP2-201ENST00000345317 KMT2DO14686 5537 aa3.31□□□□□ -1.88
SKAP2-201ENST00000345317 KRTAP8-1Q8IUC2 63 aa3.3□□□□□ -1.88
SKAP2-201ENST00000345317 SPRR2FQ96RM1 72 aa3.19□□□□□ -1.9
SKAP2-201ENST00000345317 DSTQ03001 7570 aaKnown RBP3.16□□□□□ -1.9
SKAP2-201ENST00000345317 SSPOA2VEC9 5147 aa3.13□□□□□ -1.91
SKAP2-201ENST00000345317 KRTAP4-7Q9BYR0 210 aa3.13□□□□□ -1.91
SKAP2-201ENST00000345317 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
SKAP2-201ENST00000345317 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
SKAP2-201ENST00000345317 KRTAP9-2Q9BYQ4 174 aa3.08□□□□□ -1.92
SKAP2-201ENST00000345317 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms