RNA–Protein interactions for RNA: ENST00000343677.3

HIST1H1C-201, Transcript of histone cluster 1 H1 family member c, humanhuman

APPRIS P1 BASIC

Gene HIST1H1C, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1C-201ENST00000343677 KRTAP3-3Q9BYR6 98 aa5.91□□□□□ -1.46
HIST1H1C-201ENST00000343677 DMAC1Q96GE9 116 aa5.89□□□□□ -1.47
HIST1H1C-201ENST00000343677 COX7CP15954 63 aa5.87□□□□□ -1.47
HIST1H1C-201ENST00000343677 NDUFC1O43677 76 aa5.86□□□□□ -1.47
HIST1H1C-201ENST00000343677 ANAPC13Q9BS18 74 aa5.84□□□□□ -1.47
HIST1H1C-201ENST00000343677 FSIP2Q5CZC0 6907 aa5.83□□□□□ -1.48
HIST1H1C-201ENST00000343677 KRTAP9-3Q9BYQ3 159 aa5.82□□□□□ -1.48
HIST1H1C-201ENST00000343677 CYSTM1Q9H1C7 97 aa5.8□□□□□ -1.48
HIST1H1C-201ENST00000343677 ACYP2P14621 99 aa5.79□□□□□ -1.48
HIST1H1C-201ENST00000343677 USH2AO75445 5202 aa5.77□□□□□ -1.49
HIST1H1C-201ENST00000343677 SPANXA2-OT1Q8N9U9 137 aa5.77□□□□□ -1.49
HIST1H1C-201ENST00000343677 LCE2BO14633 110 aa5.76□□□□□ -1.49
HIST1H1C-201ENST00000343677 CCDC179H3BU77 68 aa5.75□□□□□ -1.49
HIST1H1C-201ENST00000343677 CHKB-CPT1BH3BT56 60 aa5.74□□□□□ -1.49
HIST1H1C-201ENST00000343677 H7BZZ5 65 aa5.73□□□□□ -1.49
HIST1H1C-201ENST00000343677 ADM2Q7Z4H4 148 aa5.73□□□□□ -1.49
HIST1H1C-201ENST00000343677 CRCT1Q9UGL9 99 aa5.69□□□□□ -1.5
HIST1H1C-201ENST00000343677 KRTAP9-6A0A140TA67 174 aa5.68□□□□□ -1.5
HIST1H1C-201ENST00000343677 H0YAA0 97 aa5.68□□□□□ -1.5
HIST1H1C-201ENST00000343677 KRTAP19-1Q8IUB9 90 aa5.66□□□□□ -1.5
HIST1H1C-201ENST00000343677 SPTSSBQ8NFR3 76 aa5.66□□□□□ -1.5
HIST1H1C-201ENST00000343677 COA5Q86WW8 74 aa5.65□□□□□ -1.5
HIST1H1C-201ENST00000343677 P0C880 135 aa5.63□□□□□ -1.51
HIST1H1C-201ENST00000343677 SSPOA2VEC9 5147 aa5.62□□□□□ -1.51
HIST1H1C-201ENST00000343677 SPRR2GQ9BYE4 73 aa5.6□□□□□ -1.51
HIST1H1C-201ENST00000343677 KRTAP3-2Q9BYR7 98 aa5.59□□□□□ -1.51
HIST1H1C-201ENST00000343677 CRIPTQ9P021 101 aa5.58□□□□□ -1.52
HIST1H1C-201ENST00000343677 Q5VV11 94 aa5.53□□□□□ -1.52
HIST1H1C-201ENST00000343677 R4GN34 69 aa5.53□□□□□ -1.52
HIST1H1C-201ENST00000343677 M0QZ58 72 aa5.52□□□□□ -1.53
HIST1H1C-201ENST00000343677 MT1BP07438 61 aa5.52□□□□□ -1.53
HIST1H1C-201ENST00000343677 KRTAP19-8Q3LI54 63 aa5.52□□□□□ -1.53
HIST1H1C-201ENST00000343677 ATP5EP56381 51 aaPredicted RBP5.5□□□□□ -1.53
HIST1H1C-201ENST00000343677 TMEM258P61165 79 aa5.48□□□□□ -1.53
HIST1H1C-201ENST00000343677 LINC01554Q52M75 96 aa5.47□□□□□ -1.53
HIST1H1C-201ENST00000343677 FCGBPQ9Y6R7 5405 aaPredicted RBP5.47□□□□□ -1.53
HIST1H1C-201ENST00000343677 KRTAP19-6Q3LI70 58 aa5.46□□□□□ -1.54
HIST1H1C-201ENST00000343677 SEC61GP60059 68 aa5.42□□□□□ -1.54
HIST1H1C-201ENST00000343677 SERP1Q9Y6X1 66 aa5.41□□□□□ -1.54
HIST1H1C-201ENST00000343677 KRTAP13-4Q3LI77 160 aa5.38□□□□□ -1.55
HIST1H1C-201ENST00000343677 PCP4P48539 62 aa5.37□□□□□ -1.55
HIST1H1C-201ENST00000343677 A6NN06 94 aa5.36□□□□□ -1.55
HIST1H1C-201ENST00000343677 PLAC4Q8WY50 150 aa5.36□□□□□ -1.55
HIST1H1C-201ENST00000343677 A0A1B0GU69 56 aa5.35□□□□□ -1.55
HIST1H1C-201ENST00000343677 A0A1B0GU33 70 aa5.32□□□□□ -1.56
HIST1H1C-201ENST00000343677 KRTAP10-5P60370 271 aa5.32□□□□□ -1.56
HIST1H1C-201ENST00000343677 SPATA8Q6RVD6 105 aa5.31□□□□□ -1.56
HIST1H1C-201ENST00000343677 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.29□□□□□ -1.56
HIST1H1C-201ENST00000343677 A0A0D9SG42 100 aa5.28□□□□□ -1.56
HIST1H1C-201ENST00000343677 MACF1Q9UPN3 7388 aaKnown RBP5.28□□□□□ -1.56
HIST1H1C-201ENST00000343677 LINC01558Q9Y6Z2 57 aa5.26□□□□□ -1.57
HIST1H1C-201ENST00000343677 MT1XP80297 61 aa5.25□□□□□ -1.57
HIST1H1C-201ENST00000343677 SYNE2Q8WXH0 6885 aaKnown RBP5.24□□□□□ -1.57
HIST1H1C-201ENST00000343677 PRR15LQ9BU68 103 aa5.24□□□□□ -1.57
HIST1H1C-201ENST00000343677 PRO2289Q9P1D8 64 aa5.21□□□□□ -1.58
HIST1H1C-201ENST00000343677 A8MU10 97 aa5.18□□□□□ -1.58
HIST1H1C-201ENST00000343677 SPINT4Q6UDR6 99 aa5.17□□□□□ -1.58
HIST1H1C-201ENST00000343677 SMIM26A0A096LP01 95 aa5.14□□□□□ -1.59
HIST1H1C-201ENST00000343677 KRTAP9-7A8MTY7 169 aa5.14□□□□□ -1.59
HIST1H1C-201ENST00000343677 CAMK2N1Q7Z7J9 78 aa5.14□□□□□ -1.59
HIST1H1C-201ENST00000343677 PSPHP1O15172 72 aa5.13□□□□□ -1.59
HIST1H1C-201ENST00000343677 KRTAP12-1P59990 96 aa5.12□□□□□ -1.59
HIST1H1C-201ENST00000343677 KRTAP12-2P59991 146 aa5.11□□□□□ -1.59
HIST1H1C-201ENST00000343677 Q1T7F1 81 aa5.1□□□□□ -1.59
HIST1H1C-201ENST00000343677 V9GYY9 64 aa5.09□□□□□ -1.59
HIST1H1C-201ENST00000343677 UQCR11O14957 56 aa5.08□□□□□ -1.6
HIST1H1C-201ENST00000343677 RPS28P62857 69 aaKnown RBP5.06□□□□□ -1.6
HIST1H1C-201ENST00000343677 KMT2DO14686 5537 aa5.06□□□□□ -1.6
HIST1H1C-201ENST00000343677 KRTAP10-7P60409 375 aaPredicted RBP5.05□□□□□ -1.6
HIST1H1C-201ENST00000343677 MIR22HGQ0VDD5 57 aa5.02□□□□□ -1.61
HIST1H1C-201ENST00000343677 KRTAP6-3Q3LI67 103 aa5□□□□□ -1.61
HIST1H1C-201ENST00000343677 KRTAP4-8A0A0G2JLE6 195 aa4.97□□□□□ -1.61
HIST1H1C-201ENST00000343677 KRTAP4-8Q9BYQ9 185 aa4.97□□□□□ -1.61
HIST1H1C-201ENST00000343677 KRTAP10-12P60413 245 aa4.96□□□□□ -1.62
HIST1H1C-201ENST00000343677 A6NED7 52 aa4.95□□□□□ -1.62
HIST1H1C-201ENST00000343677 KRTAP8-1Q8IUC2 63 aa4.93□□□□□ -1.62
HIST1H1C-201ENST00000343677 C10orf95Q9H7T3 257 aa4.89□□□□□ -1.63
HIST1H1C-201ENST00000343677 MUC12Q9UKN1 5478 aa4.89□□□□□ -1.63
HIST1H1C-201ENST00000343677 KRTAP5-9P26371 169 aa4.88□□□□□ -1.63
HIST1H1C-201ENST00000343677 NEBP20929 6669 aa4.87□□□□□ -1.63
HIST1H1C-201ENST00000343677 SPRR2FQ96RM1 72 aa4.87□□□□□ -1.63
HIST1H1C-201ENST00000343677 K7ERS5 55 aa4.84□□□□□ -1.63
HIST1H1C-201ENST00000343677 MDN1Q9NU22 5596 aa4.8□□□□□ -1.64
HIST1H1C-201ENST00000343677 TNP1P09430 55 aa4.79□□□□□ -1.64
HIST1H1C-201ENST00000343677 CDC42SE1Q9NRR8 79 aa4.75□□□□□ -1.65
HIST1H1C-201ENST00000343677 SPRR2EP22531 72 aa4.74□□□□□ -1.65
HIST1H1C-201ENST00000343677 SPRR2BP35325 72 aa4.74□□□□□ -1.65
HIST1H1C-201ENST00000343677 SPRR2AP35326 72 aa4.74□□□□□ -1.65
HIST1H1C-201ENST00000343677 LCE3AQ5TA76 89 aa4.71□□□□□ -1.66
HIST1H1C-201ENST00000343677 SVIPQ8NHG7 77 aa4.71□□□□□ -1.66
HIST1H1C-201ENST00000343677 KRTAP19-7Q3SYF9 63 aa4.68□□□□□ -1.66
HIST1H1C-201ENST00000343677 KRTAP19-5Q3LI72 72 aa4.67□□□□□ -1.66
HIST1H1C-201ENST00000343677 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
HIST1H1C-201ENST00000343677 MT1EP04732 61 aa4.63□□□□□ -1.67
HIST1H1C-201ENST00000343677 KRTAP25-1Q3LHN0 102 aa4.63□□□□□ -1.67
HIST1H1C-201ENST00000343677 ROMO1P60602 79 aa4.58□□□□□ -1.68
HIST1H1C-201ENST00000343677 BRK1Q8WUW1 75 aa4.58□□□□□ -1.68
HIST1H1C-201ENST00000343677 SPRR2DP22532 72 aa4.57□□□□□ -1.68
HIST1H1C-201ENST00000343677 KRTAP20-1Q3LI63 56 aa4.53□□□□□ -1.68
HIST1H1C-201ENST00000343677 KRTAP19-3Q7Z4W3 81 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms