RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 LCE2DQ5TA82 110 aaPredicted RBP3.65□□□□□ -1.83
NUP43-201ENST00000340413 Q1T7F1 81 aa3.64□□□□□ -1.83
NUP43-201ENST00000340413 KRTAP3-1Q9BYR8 98 aa3.63□□□□□ -1.83
NUP43-201ENST00000340413 PRAC1Q96KF2 57 aa3.63□□□□□ -1.83
NUP43-201ENST00000340413 CHKB-CPT1BH3BT56 60 aa3.62□□□□□ -1.83
NUP43-201ENST00000340413 LINC01558Q9Y6Z2 57 aa3.61□□□□□ -1.83
NUP43-201ENST00000340413 HERC1Q15751 4861 aa3.61□□□□□ -1.83
NUP43-201ENST00000340413 HMCN2Q8NDA2 5059 aa3.61□□□□□ -1.83
NUP43-201ENST00000340413 H0YAA0 97 aa3.6□□□□□ -1.83
NUP43-201ENST00000340413 S4R3F8 94 aa3.59□□□□□ -1.83
NUP43-201ENST00000340413 KRTAP19-2Q3LHN2 52 aa3.59□□□□□ -1.83
NUP43-201ENST00000340413 BRK1Q8WUW1 75 aa3.58□□□□□ -1.84
NUP43-201ENST00000340413 PRR15LQ9BU68 103 aa3.58□□□□□ -1.84
NUP43-201ENST00000340413 KRTAP4-1Q9BYQ7 146 aa3.56□□□□□ -1.84
NUP43-201ENST00000340413 CSAG1Q6PB30 78 aa3.53□□□□□ -1.84
NUP43-201ENST00000340413 LCA10Q71F78 164 aa3.52□□□□□ -1.85
NUP43-201ENST00000340413 LRP2P98164 4655 aa3.5□□□□□ -1.85
NUP43-201ENST00000340413 LPAP08519 4548 aa3.5□□□□□ -1.85
NUP43-201ENST00000340413 A0A1B0GU69 56 aa3.48□□□□□ -1.85
NUP43-201ENST00000340413 LCE2CQ5TA81 110 aa3.48□□□□□ -1.85
NUP43-201ENST00000340413 CRIPTQ9P021 101 aa3.47□□□□□ -1.85
NUP43-201ENST00000340413 Q5VV11 94 aa3.45□□□□□ -1.86
NUP43-201ENST00000340413 FLGP20930 4061 aaPredicted RBP3.43□□□□□ -1.86
NUP43-201ENST00000340413 KRTAP23-1A1A580 65 aa3.43□□□□□ -1.86
NUP43-201ENST00000340413 M0QZ58 72 aa3.42□□□□□ -1.86
NUP43-201ENST00000340413 UQCR11O14957 56 aa3.42□□□□□ -1.86
NUP43-201ENST00000340413 A6NED7 52 aa3.41□□□□□ -1.86
NUP43-201ENST00000340413 MT1HP80294 61 aa3.41□□□□□ -1.86
NUP43-201ENST00000340413 KRTAP10-6P60371 365 aaPredicted RBP3.4□□□□□ -1.86
NUP43-201ENST00000340413 SPATA8Q6RVD6 105 aa3.4□□□□□ -1.87
NUP43-201ENST00000340413 MUC2Q02817 5179 aa3.39□□□□□ -1.87
NUP43-201ENST00000340413 A0A1B0GU33 70 aa3.39□□□□□ -1.87
NUP43-201ENST00000340413 PSPHP1O15172 72 aa3.39□□□□□ -1.87
NUP43-201ENST00000340413 CDC42SE1Q9NRR8 79 aa3.39□□□□□ -1.87
NUP43-201ENST00000340413 RNF213Q63HN8 5207 aa3.38□□□□□ -1.87
NUP43-201ENST00000340413 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
NUP43-201ENST00000340413 ADM2Q7Z4H4 148 aa3.37□□□□□ -1.87
NUP43-201ENST00000340413 A6NN06 94 aa3.36□□□□□ -1.87
NUP43-201ENST00000340413 UBR4Q5T4S7 5183 aa3.34□□□□□ -1.87
NUP43-201ENST00000340413 MIR22HGQ0VDD5 57 aa3.34□□□□□ -1.87
NUP43-201ENST00000340413 LCE2BO14633 110 aa3.34□□□□□ -1.88
NUP43-201ENST00000340413 LCE2AQ5TA79 106 aaPredicted RBP3.33□□□□□ -1.88
NUP43-201ENST00000340413 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
NUP43-201ENST00000340413 P0C880 135 aa3.3□□□□□ -1.88
NUP43-201ENST00000340413 KRTAP9-6A0A140TA67 174 aa3.29□□□□□ -1.88
NUP43-201ENST00000340413 LORP23490 312 aaPredicted RBP3.29□□□□□ -1.88
NUP43-201ENST00000340413 SPRR2GQ9BYE4 73 aa3.29□□□□□ -1.88
NUP43-201ENST00000340413 KRTAP9-8Q9BYQ0 159 aa3.29□□□□□ -1.88
NUP43-201ENST00000340413 LINC01554Q52M75 96 aa3.28□□□□□ -1.88
NUP43-201ENST00000340413 KRTAP9-2Q9BYQ4 174 aa3.27□□□□□ -1.89
NUP43-201ENST00000340413 MT2AP02795 61 aa3.27□□□□□ -1.89
NUP43-201ENST00000340413 K7ERS5 55 aa3.26□□□□□ -1.89
NUP43-201ENST00000340413 R4GN34 69 aa3.26□□□□□ -1.89
NUP43-201ENST00000340413 FAT4Q6V0I7 4981 aa3.25□□□□□ -1.89
NUP43-201ENST00000340413 KRTAP19-8Q3LI54 63 aa3.23□□□□□ -1.89
NUP43-201ENST00000340413 KRTAP13-4Q3LI77 160 aa3.23□□□□□ -1.89
NUP43-201ENST00000340413 MT1FP04733 61 aa3.21□□□□□ -1.9
NUP43-201ENST00000340413 KRTAP10-10P60014 251 aa3.19□□□□□ -1.9
NUP43-201ENST00000340413 KRTAP9-3Q9BYQ3 159 aa3.19□□□□□ -1.9
NUP43-201ENST00000340413 A0A0D9SG42 100 aa3.19□□□□□ -1.9
NUP43-201ENST00000340413 KRTAP12-1P59990 96 aa3.19□□□□□ -1.9
NUP43-201ENST00000340413 KRTAP19-1Q8IUB9 90 aa3.19□□□□□ -1.9
NUP43-201ENST00000340413 CRCT1Q9UGL9 99 aa3.17□□□□□ -1.9
NUP43-201ENST00000340413 A8MU10 97 aa3.14□□□□□ -1.91
NUP43-201ENST00000340413 PLAC4Q8WY50 150 aa3.13□□□□□ -1.91
NUP43-201ENST00000340413 KRTAP12-2P59991 146 aa3.12□□□□□ -1.91
NUP43-201ENST00000340413 CAMK2N1Q7Z7J9 78 aa3.11□□□□□ -1.91
NUP43-201ENST00000340413 ROMO1P60602 79 aa3.09□□□□□ -1.91
NUP43-201ENST00000340413 SPINT4Q6UDR6 99 aa3.09□□□□□ -1.91
NUP43-201ENST00000340413 FSIP2Q5CZC0 6907 aa3.09□□□□□ -1.91
NUP43-201ENST00000340413 MT1BP07438 61 aa3.08□□□□□ -1.92
NUP43-201ENST00000340413 KRTAP25-1Q3LHN0 102 aa3.06□□□□□ -1.92
NUP43-201ENST00000340413 PRO2289Q9P1D8 64 aa3.05□□□□□ -1.92
NUP43-201ENST00000340413 NDUFAF8A1L188 74 aa3□□□□□ -1.93
NUP43-201ENST00000340413 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
NUP43-201ENST00000340413 PP632Q6XCG6 107 aa2.99□□□□□ -1.93
NUP43-201ENST00000340413 KRTAP19-6Q3LI70 58 aa2.99□□□□□ -1.93
NUP43-201ENST00000340413 C10orf95Q9H7T3 257 aa2.98□□□□□ -1.93
NUP43-201ENST00000340413 KRTAP9-7A8MTY7 169 aa2.98□□□□□ -1.93
NUP43-201ENST00000340413 TNP1P09430 55 aa2.98□□□□□ -1.93
NUP43-201ENST00000340413 MT1XP80297 61 aa2.97□□□□□ -1.93
NUP43-201ENST00000340413 USH2AO75445 5202 aa2.91□□□□□ -1.94
NUP43-201ENST00000340413 KRTAP10-12P60413 245 aa2.91□□□□□ -1.94
NUP43-201ENST00000340413 KRTAP19-4Q3LI73 84 aa2.87□□□□□ -1.95
NUP43-201ENST00000340413 KRTAP15-1Q3LI76 137 aa2.83□□□□□ -1.96
NUP43-201ENST00000340413 KRTAP8-1Q8IUC2 63 aa2.83□□□□□ -1.96
NUP43-201ENST00000340413 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.82□□□□□ -1.96
NUP43-201ENST00000340413 SSPOA2VEC9 5147 aa2.81□□□□□ -1.96
NUP43-201ENST00000340413 KRTAP10-7P60409 375 aaPredicted RBP2.78□□□□□ -1.96
NUP43-201ENST00000340413 LCE3AQ5TA76 89 aa2.75□□□□□ -1.97
NUP43-201ENST00000340413 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
NUP43-201ENST00000340413 KRTAP12-3P60328 96 aa2.69□□□□□ -1.98
NUP43-201ENST00000340413 KMT2DO14686 5537 aa2.67□□□□□ -1.98
NUP43-201ENST00000340413 SYNE2Q8WXH0 6885 aaKnown RBP2.65□□□□□ -1.98
NUP43-201ENST00000340413 KRTAP5-9P26371 169 aa2.65□□□□□ -1.98
NUP43-201ENST00000340413 KRTAP19-7Q3SYF9 63 aa2.65□□□□□ -1.99
NUP43-201ENST00000340413 KRTAP19-5Q3LI72 72 aa2.64□□□□□ -1.99
NUP43-201ENST00000340413 MT1EP04732 61 aa2.63□□□□□ -1.99
NUP43-201ENST00000340413 SPRR2FQ96RM1 72 aa2.63□□□□□ -1.99
NUP43-201ENST00000340413 KRTAP6-3Q3LI67 103 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms