RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 MGAM2Q2M2H8 2515 aa3.88□□□□□ -1.79
TDP1-201ENST00000335725 DNAH6Q9C0G6 4158 aa3.86□□□□□ -1.79
TDP1-201ENST00000335725 KMT2AQ03164 3969 aa3.86□□□□□ -1.79
TDP1-201ENST00000335725 STAB1Q9NY15 2570 aa3.86□□□□□ -1.79
TDP1-201ENST00000335725 MYCBP2O75592 4640 aa3.85□□□□□ -1.79
TDP1-201ENST00000335725 HUWE1Q7Z6Z7 4374 aaKnown RBP3.84□□□□□ -1.79
TDP1-201ENST00000335725 KRTAP10-2P60368 255 aa3.83□□□□□ -1.8
TDP1-201ENST00000335725 TNP1P09430 55 aa3.83□□□□□ -1.8
TDP1-201ENST00000335725 DNAH2Q9P225 4427 aa3.82□□□□□ -1.8
TDP1-201ENST00000335725 DNAH7Q8WXX0 4024 aa3.82□□□□□ -1.8
TDP1-201ENST00000335725 HECTD4Q9Y4D8 3996 aa3.82□□□□□ -1.8
TDP1-201ENST00000335725 PRKDCP78527 4128 aaKnown RBP3.81□□□□□ -1.8
TDP1-201ENST00000335725 LCE2DQ5TA82 110 aaPredicted RBP3.79□□□□□ -1.8
TDP1-201ENST00000335725 DNHD1Q96M86 4753 aa3.78□□□□□ -1.8
TDP1-201ENST00000335725 KRTAP10-1P60331 282 aa3.76□□□□□ -1.81
TDP1-201ENST00000335725 APOBP04114 4563 aaKnown RBP3.74□□□□□ -1.81
TDP1-201ENST00000335725 A0A1B0GVY2 172 aa3.7□□□□□ -1.82
TDP1-201ENST00000335725 PLECQ15149 4684 aaKnown RBP3.69□□□□□ -1.82
TDP1-201ENST00000335725 LRP1BQ9NZR2 4599 aa3.66□□□□□ -1.82
TDP1-201ENST00000335725 SACSQ9NZJ4 4579 aa3.65□□□□□ -1.83
TDP1-201ENST00000335725 LORP23490 312 aaPredicted RBP3.58□□□□□ -1.84
TDP1-201ENST00000335725 LRP1Q07954 4544 aaKnown RBP3.58□□□□□ -1.84
TDP1-201ENST00000335725 DNAH5Q8TE73 4624 aa3.58□□□□□ -1.84
TDP1-201ENST00000335725 VPS13BQ7Z7G8 4022 aa3.58□□□□□ -1.84
TDP1-201ENST00000335725 STARD9Q9P2P6 4700 aa3.55□□□□□ -1.84
TDP1-201ENST00000335725 KRTAP10-10P60014 251 aa3.55□□□□□ -1.84
TDP1-201ENST00000335725 PKHD1L1Q86WI1 4243 aa3.54□□□□□ -1.84
TDP1-201ENST00000335725 PKD1P98161 4303 aa3.51□□□□□ -1.85
TDP1-201ENST00000335725 FAT2Q9NYQ8 4349 aa3.5□□□□□ -1.85
TDP1-201ENST00000335725 SMR3BP02814 79 aaPredicted RBP3.49□□□□□ -1.85
TDP1-201ENST00000335725 PKHD1P08F94 4074 aa3.48□□□□□ -1.85
TDP1-201ENST00000335725 RYR3Q15413 4870 aa3.46□□□□□ -1.86
TDP1-201ENST00000335725 DYNC1H1Q14204 4646 aaKnown RBP3.43□□□□□ -1.86
TDP1-201ENST00000335725 RYR2Q92736 4967 aa3.42□□□□□ -1.86
TDP1-201ENST00000335725 FAT3Q8TDW7 4589 aa3.41□□□□□ -1.86
TDP1-201ENST00000335725 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
TDP1-201ENST00000335725 KRTAP10-4P60372 401 aaPredicted RBP3.41□□□□□ -1.86
TDP1-201ENST00000335725 TNXBP22105 4242 aa3.4□□□□□ -1.86
TDP1-201ENST00000335725 HSPG2P98160 4391 aa3.38□□□□□ -1.87
TDP1-201ENST00000335725 LCE2BO14633 110 aa3.38□□□□□ -1.87
TDP1-201ENST00000335725 KRTAP8-1Q8IUC2 63 aa3.38□□□□□ -1.87
TDP1-201ENST00000335725 KMT2CQ8NEZ4 4911 aaKnown RBP3.37□□□□□ -1.87
TDP1-201ENST00000335725 LCE2CQ5TA81 110 aa3.35□□□□□ -1.87
TDP1-201ENST00000335725 KRTAP10-12P60413 245 aa3.33□□□□□ -1.88
TDP1-201ENST00000335725 HYDINQ4G0P3 5121 aa3.28□□□□□ -1.88
TDP1-201ENST00000335725 FAT1Q14517 4588 aa3.28□□□□□ -1.88
TDP1-201ENST00000335725 LCE2AQ5TA79 106 aaPredicted RBP3.28□□□□□ -1.88
TDP1-201ENST00000335725 BIRC6Q9NR09 4857 aa3.28□□□□□ -1.88
TDP1-201ENST00000335725 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
TDP1-201ENST00000335725 HERC2O95714 4834 aa3.26□□□□□ -1.89
TDP1-201ENST00000335725 FLGP20930 4061 aaPredicted RBP3.25□□□□□ -1.89
TDP1-201ENST00000335725 EPPK1P58107 5090 aaKnown RBP3.23□□□□□ -1.89
TDP1-201ENST00000335725 KRTAP10-5P60370 271 aa3.18□□□□□ -1.9
TDP1-201ENST00000335725 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
TDP1-201ENST00000335725 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
TDP1-201ENST00000335725 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
TDP1-201ENST00000335725 M0R2T5 61 aa3.17□□□□□ -1.9
TDP1-201ENST00000335725 LPAP08519 4548 aa3.14□□□□□ -1.91
TDP1-201ENST00000335725 RYR1P21817 5038 aa3.11□□□□□ -1.91
TDP1-201ENST00000335725 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
TDP1-201ENST00000335725 MT1HL1P0DM35 61 aa3.09□□□□□ -1.92
TDP1-201ENST00000335725 SPRR2GQ9BYE4 73 aa3.09□□□□□ -1.92
TDP1-201ENST00000335725 ABCA13Q86UQ4 5058 aa3.07□□□□□ -1.92
TDP1-201ENST00000335725 LRP2P98164 4655 aa3.07□□□□□ -1.92
TDP1-201ENST00000335725 KRTAP2-2Q9BYT5 123 aa3.06□□□□□ -1.92
TDP1-201ENST00000335725 PCLOQ9Y6V0 5065 aa3.05□□□□□ -1.92
TDP1-201ENST00000335725 KRTAP4-5Q9BYR2 181 aa3.05□□□□□ -1.92
TDP1-201ENST00000335725 KRTAP17-1Q9BYP8 105 aa3.04□□□□□ -1.92
TDP1-201ENST00000335725 HERC1Q15751 4861 aa3.03□□□□□ -1.92
TDP1-201ENST00000335725 KRTAP19-2Q3LHN2 52 aa3.02□□□□□ -1.93
TDP1-201ENST00000335725 KRTAP10-7P60409 375 aaPredicted RBP3.01□□□□□ -1.93
TDP1-201ENST00000335725 KIAA1109Q2LD37 5005 aa3.01□□□□□ -1.93
TDP1-201ENST00000335725 MUC17Q685J3 4493 aa2.99□□□□□ -1.93
TDP1-201ENST00000335725 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
TDP1-201ENST00000335725 KRTAP4-1Q9BYQ7 146 aa2.96□□□□□ -1.93
TDP1-201ENST00000335725 KRTAP19-1Q8IUB9 90 aa2.96□□□□□ -1.94
TDP1-201ENST00000335725 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
TDP1-201ENST00000335725 KRTAP19-4Q3LI73 84 aa2.91□□□□□ -1.94
TDP1-201ENST00000335725 KRTAP6-3Q3LI67 103 aa2.9□□□□□ -1.95
TDP1-201ENST00000335725 LCE1AQ5T7P2 110 aa2.88□□□□□ -1.95
TDP1-201ENST00000335725 KRTAP19-5Q3LI72 72 aa2.86□□□□□ -1.95
TDP1-201ENST00000335725 MT1XP80297 61 aa2.85□□□□□ -1.95
TDP1-201ENST00000335725 KRTAP9-6A0A140TA67 174 aa2.84□□□□□ -1.95
TDP1-201ENST00000335725 KRTAP19-8Q3LI54 63 aa2.83□□□□□ -1.96
TDP1-201ENST00000335725 HMCN2Q8NDA2 5059 aa2.83□□□□□ -1.96
TDP1-201ENST00000335725 LCE5AQ5TCM9 118 aa2.73□□□□□ -1.97
TDP1-201ENST00000335725 MT1BP07438 61 aa2.71□□□□□ -1.98
TDP1-201ENST00000335725 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
TDP1-201ENST00000335725 PRM1P04553 51 aa2.7□□□□□ -1.98
TDP1-201ENST00000335725 MUC2Q02817 5179 aa2.68□□□□□ -1.98
TDP1-201ENST00000335725 MT1FP04733 61 aa2.64□□□□□ -1.99
TDP1-201ENST00000335725 MT2AP02795 61 aa2.63□□□□□ -1.99
TDP1-201ENST00000335725 KRTAP9-2Q9BYQ4 174 aa2.63□□□□□ -1.99
TDP1-201ENST00000335725 KRTAP4-7Q9BYR0 210 aa2.63□□□□□ -1.99
TDP1-201ENST00000335725 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
TDP1-201ENST00000335725 LCE1DQ5T752 114 aa2.61□□□□□ -1.99
TDP1-201ENST00000335725 MT1HP80294 61 aa2.6□□□□□ -1.99
TDP1-201ENST00000335725 FAT4Q6V0I7 4981 aa2.59□□□□□ -2
TDP1-201ENST00000335725 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
TDP1-201ENST00000335725 KRTAP9-7A8MTY7 169 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms