RNA–Protein interactions for RNA: ENST00000335500.8

GPATCH8-201, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 8,109 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-201ENST00000335500 KRTAP12-3P60328 96 aa3.85□□□□□ -1.79
GPATCH8-201ENST00000335500 DNAH1Q9P2D7 4330 aa3.84□□□□□ -1.8
GPATCH8-201ENST00000335500 DNAH3Q8TD57 4116 aa3.8□□□□□ -1.8
GPATCH8-201ENST00000335500 DNAH2Q9P225 4427 aa3.72□□□□□ -1.81
GPATCH8-201ENST00000335500 LCE3AQ5TA76 89 aa3.71□□□□□ -1.82
GPATCH8-201ENST00000335500 DNAH6Q9C0G6 4158 aa3.71□□□□□ -1.82
GPATCH8-201ENST00000335500 DNAH7Q8WXX0 4024 aa3.71□□□□□ -1.82
GPATCH8-201ENST00000335500 CMYA5Q8N3K9 4069 aa3.68□□□□□ -1.82
GPATCH8-201ENST00000335500 KRTAP19-4Q3LI73 84 aa3.67□□□□□ -1.82
GPATCH8-201ENST00000335500 VPS13BQ7Z7G8 4022 aa3.64□□□□□ -1.83
GPATCH8-201ENST00000335500 HECTD4Q9Y4D8 3996 aa3.64□□□□□ -1.83
GPATCH8-201ENST00000335500 LYSTQ99698 3801 aa3.63□□□□□ -1.83
GPATCH8-201ENST00000335500 DNAH9Q9NYC9 4486 aa3.62□□□□□ -1.83
GPATCH8-201ENST00000335500 KRTAP4-5Q9BYR2 181 aa3.6□□□□□ -1.83
GPATCH8-201ENST00000335500 ANK2Q01484 3957 aa3.6□□□□□ -1.83
GPATCH8-201ENST00000335500 SPRR2GQ9BYE4 73 aa3.59□□□□□ -1.83
GPATCH8-201ENST00000335500 KMT2AQ03164 3969 aa3.59□□□□□ -1.84
GPATCH8-201ENST00000335500 LORP23490 312 aaPredicted RBP3.57□□□□□ -1.84
GPATCH8-201ENST00000335500 KRTAP8-1Q8IUC2 63 aa3.56□□□□□ -1.84
GPATCH8-201ENST00000335500 CRCT1Q9UGL9 99 aa3.56□□□□□ -1.84
GPATCH8-201ENST00000335500 DNAH10Q8IVF4 4471 aa3.52□□□□□ -1.85
GPATCH8-201ENST00000335500 DYNC2H1Q8NCM8 4307 aaKnown RBP3.52□□□□□ -1.85
GPATCH8-201ENST00000335500 FAT2Q9NYQ8 4349 aa3.51□□□□□ -1.85
GPATCH8-201ENST00000335500 VPS13DQ5THJ4 4388 aa3.5□□□□□ -1.85
GPATCH8-201ENST00000335500 FRAS1Q86XX4 4008 aa3.49□□□□□ -1.85
GPATCH8-201ENST00000335500 KRTAP10-5P60370 271 aa3.47□□□□□ -1.85
GPATCH8-201ENST00000335500 DNAH11Q96DT5 4516 aa3.46□□□□□ -1.86
GPATCH8-201ENST00000335500 PRKDCP78527 4128 aaKnown RBP3.45□□□□□ -1.86
GPATCH8-201ENST00000335500 MT1HP80294 61 aa3.45□□□□□ -1.86
GPATCH8-201ENST00000335500 DNAH17Q9UFH2 4485 aa3.41□□□□□ -1.86
GPATCH8-201ENST00000335500 MT2AP02795 61 aa3.41□□□□□ -1.86
GPATCH8-201ENST00000335500 KRTAP4-1Q9BYQ7 146 aa3.4□□□□□ -1.87
GPATCH8-201ENST00000335500 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
GPATCH8-201ENST00000335500 PLECQ15149 4684 aaKnown RBP3.38□□□□□ -1.87
GPATCH8-201ENST00000335500 DNAH5Q8TE73 4624 aa3.37□□□□□ -1.87
GPATCH8-201ENST00000335500 KRTAP10-7P60409 375 aaPredicted RBP3.36□□□□□ -1.87
GPATCH8-201ENST00000335500 DNAH8Q96JB1 4490 aa3.35□□□□□ -1.87
GPATCH8-201ENST00000335500 STARD9Q9P2P6 4700 aa3.33□□□□□ -1.88
GPATCH8-201ENST00000335500 KRTAP19-5Q3LI72 72 aa3.32□□□□□ -1.88
GPATCH8-201ENST00000335500 KRTAP19-8Q3LI54 63 aa3.3□□□□□ -1.88
GPATCH8-201ENST00000335500 MT1FP04733 61 aa3.3□□□□□ -1.88
GPATCH8-201ENST00000335500 LRP1BQ9NZR2 4599 aa3.26□□□□□ -1.89
GPATCH8-201ENST00000335500 SPRR2FQ96RM1 72 aa3.22□□□□□ -1.89
GPATCH8-201ENST00000335500 FLGP20930 4061 aaPredicted RBP3.22□□□□□ -1.89
GPATCH8-201ENST00000335500 SPRR5A0A1B0GTR4 108 aa3.21□□□□□ -1.9
GPATCH8-201ENST00000335500 KRTAP19-1Q8IUB9 90 aa3.2□□□□□ -1.9
GPATCH8-201ENST00000335500 DYNC1H1Q14204 4646 aaKnown RBP3.17□□□□□ -1.9
GPATCH8-201ENST00000335500 LRP1Q07954 4544 aaKnown RBP3.17□□□□□ -1.9
GPATCH8-201ENST00000335500 MT1XP80297 61 aa3.13□□□□□ -1.91
GPATCH8-201ENST00000335500 SACSQ9NZJ4 4579 aa3.12□□□□□ -1.91
GPATCH8-201ENST00000335500 FAT1Q14517 4588 aa3.11□□□□□ -1.91
GPATCH8-201ENST00000335500 PKHD1P08F94 4074 aa3.11□□□□□ -1.91
GPATCH8-201ENST00000335500 PKHD1L1Q86WI1 4243 aa3.11□□□□□ -1.91
GPATCH8-201ENST00000335500 APOBP04114 4563 aaKnown RBP3.08□□□□□ -1.92
GPATCH8-201ENST00000335500 MT1GP13640 62 aa3.07□□□□□ -1.92
GPATCH8-201ENST00000335500 KRTAP9-8Q9BYQ0 159 aa3.05□□□□□ -1.92
GPATCH8-201ENST00000335500 KRTAP12-4P60329 112 aa3.04□□□□□ -1.92
GPATCH8-201ENST00000335500 MT1BP07438 61 aa3.04□□□□□ -1.92
GPATCH8-201ENST00000335500 FAT3Q8TDW7 4589 aa3.02□□□□□ -1.93
GPATCH8-201ENST00000335500 SPRR2EP22531 72 aa3.01□□□□□ -1.93
GPATCH8-201ENST00000335500 SPRR2BP35325 72 aa3.01□□□□□ -1.93
GPATCH8-201ENST00000335500 SPRR2AP35326 72 aa3.01□□□□□ -1.93
GPATCH8-201ENST00000335500 LCE2BO14633 110 aa3□□□□□ -1.93
GPATCH8-201ENST00000335500 PKD1P98161 4303 aa3□□□□□ -1.93
GPATCH8-201ENST00000335500 LCE3BQ5TA77 95 aa2.99□□□□□ -1.93
GPATCH8-201ENST00000335500 TNXBP22105 4242 aa2.98□□□□□ -1.93
GPATCH8-201ENST00000335500 KRTAP9-3Q9BYQ3 159 aa2.98□□□□□ -1.93
GPATCH8-201ENST00000335500 MT1LQ93083 61 aa2.97□□□□□ -1.93
GPATCH8-201ENST00000335500 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
GPATCH8-201ENST00000335500 MYCBP2O75592 4640 aa2.95□□□□□ -1.94
GPATCH8-201ENST00000335500 HSPG2P98160 4391 aa2.94□□□□□ -1.94
GPATCH8-201ENST00000335500 SPRR2DP22532 72 aa2.94□□□□□ -1.94
GPATCH8-201ENST00000335500 LCE2CQ5TA81 110 aa2.94□□□□□ -1.94
GPATCH8-201ENST00000335500 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
GPATCH8-201ENST00000335500 DNHD1Q96M86 4753 aa2.91□□□□□ -1.94
GPATCH8-201ENST00000335500 MT3P25713 68 aa2.91□□□□□ -1.94
GPATCH8-201ENST00000335500 KRTAP19-3Q7Z4W3 81 aa2.9□□□□□ -1.94
GPATCH8-201ENST00000335500 RYR1P21817 5038 aa2.85□□□□□ -1.95
GPATCH8-201ENST00000335500 KRTAP17-1Q9BYP8 105 aa2.84□□□□□ -1.95
GPATCH8-201ENST00000335500 MT1EP04732 61 aa2.84□□□□□ -1.95
GPATCH8-201ENST00000335500 KRTAP4-8A0A0G2JLE6 195 aa2.83□□□□□ -1.96
GPATCH8-201ENST00000335500 KRTAP4-8Q9BYQ9 185 aa2.83□□□□□ -1.96
GPATCH8-201ENST00000335500 KRTAP19-2Q3LHN2 52 aa2.8□□□□□ -1.96
GPATCH8-201ENST00000335500 LRP2P98164 4655 aa2.79□□□□□ -1.96
GPATCH8-201ENST00000335500 RYR3Q15413 4870 aa2.79□□□□□ -1.96
GPATCH8-201ENST00000335500 KRTAP19-6Q3LI70 58 aa2.75□□□□□ -1.97
GPATCH8-201ENST00000335500 LCE2DQ5TA82 110 aaPredicted RBP2.75□□□□□ -1.97
GPATCH8-201ENST00000335500 MT1MQ8N339 61 aa2.74□□□□□ -1.97
GPATCH8-201ENST00000335500 MUC17Q685J3 4493 aa2.72□□□□□ -1.97
GPATCH8-201ENST00000335500 RYR2Q92736 4967 aa2.7□□□□□ -1.98
GPATCH8-201ENST00000335500 LPAP08519 4548 aa2.68□□□□□ -1.98
GPATCH8-201ENST00000335500 KRTAP2-3P0C7H8 128 aa2.63□□□□□ -1.99
GPATCH8-201ENST00000335500 KRTAP2-4Q9BYR9 128 aa2.63□□□□□ -1.99
GPATCH8-201ENST00000335500 KRTAP2-1Q9BYU5 128 aa2.63□□□□□ -1.99
GPATCH8-201ENST00000335500 PRM1P04553 51 aa2.63□□□□□ -1.99
GPATCH8-201ENST00000335500 KRTAP4-7Q9BYR0 210 aa2.62□□□□□ -1.99
GPATCH8-201ENST00000335500 MT1AP04731 61 aa2.6□□□□□ -1.99
GPATCH8-201ENST00000335500 KRTAP19-7Q3SYF9 63 aa2.58□□□□□ -2
GPATCH8-201ENST00000335500 LCE2AQ5TA79 106 aaPredicted RBP2.58□□□□□ -2
GPATCH8-201ENST00000335500 KMT2CQ8NEZ4 4911 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms