RNA–Protein interactions for RNA: ENST00000329841.9

ALDH1A3-201, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALDH1A3, Length 3,924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-201ENST00000329841 PKD1P98161 4303 aa9.38□□□□□ -0.91
ALDH1A3-201ENST00000329841 C20orf166-AS1Q96NR2 134 aa9.35□□□□□ -0.91
ALDH1A3-201ENST00000329841 PKHD1P08F94 4074 aa9.31□□□□□ -0.92
ALDH1A3-201ENST00000329841 P0C880 135 aa9.27□□□□□ -0.92
ALDH1A3-201ENST00000329841 A0A0A0MQY5 61 aa9.17□□□□□ -0.94
ALDH1A3-201ENST00000329841 TPRXLQ17RH7 258 aa9.16□□□□□ -0.94
ALDH1A3-201ENST00000329841 KRTAP3-1Q9BYR8 98 aa9.12□□□□□ -0.95
ALDH1A3-201ENST00000329841 FAT1Q14517 4588 aa9.12□□□□□ -0.95
ALDH1A3-201ENST00000329841 KRTAP10-8P60410 259 aa9.09□□□□□ -0.95
ALDH1A3-201ENST00000329841 KRTAP10-4P60372 401 aaPredicted RBP9.03□□□□□ -0.96
ALDH1A3-201ENST00000329841 KRTAP13-4Q3LI77 160 aa9.03□□□□□ -0.96
ALDH1A3-201ENST00000329841 SEC61BP60468 96 aaKnown RBP9□□□□□ -0.97
ALDH1A3-201ENST00000329841 XP32Q5T750 250 aa9□□□□□ -0.97
ALDH1A3-201ENST00000329841 KRTAP12-2P59991 146 aa9□□□□□ -0.97
ALDH1A3-201ENST00000329841 DYNC1H1Q14204 4646 aaKnown RBP8.98□□□□□ -0.97
ALDH1A3-201ENST00000329841 SACSQ9NZJ4 4579 aa8.95□□□□□ -0.98
ALDH1A3-201ENST00000329841 PLAC4Q8WY50 150 aa8.93□□□□□ -0.98
ALDH1A3-201ENST00000329841 LRP1Q07954 4544 aaKnown RBP8.83□□□□□ -1
ALDH1A3-201ENST00000329841 APOBP04114 4563 aaKnown RBP8.81□□□□□ -1
ALDH1A3-201ENST00000329841 M0R2T5 61 aa8.81□□□□□ -1
ALDH1A3-201ENST00000329841 PKHD1L1Q86WI1 4243 aa8.81□□□□□ -1
ALDH1A3-201ENST00000329841 MYCBP2O75592 4640 aa8.8□□□□□ -1
ALDH1A3-201ENST00000329841 KRTAP10-6P60371 365 aaPredicted RBP8.78□□□□□ -1
ALDH1A3-201ENST00000329841 MT1HL1P0DM35 61 aa8.75□□□□□ -1.01
ALDH1A3-201ENST00000329841 HSPG2P98160 4391 aa8.74□□□□□ -1.01
ALDH1A3-201ENST00000329841 KRTAP12-1P59990 96 aa8.73□□□□□ -1.01
ALDH1A3-201ENST00000329841 KMT2CQ8NEZ4 4911 aaKnown RBP8.67□□□□□ -1.02
ALDH1A3-201ENST00000329841 KRTAP4-5Q9BYR2 181 aa8.63□□□□□ -1.03
ALDH1A3-201ENST00000329841 FAT3Q8TDW7 4589 aa8.62□□□□□ -1.03
ALDH1A3-201ENST00000329841 RYR2Q92736 4967 aa8.61□□□□□ -1.03
ALDH1A3-201ENST00000329841 KIAA1109Q2LD37 5005 aa8.59□□□□□ -1.03
ALDH1A3-201ENST00000329841 KRTAP3-3Q9BYR6 98 aa8.58□□□□□ -1.04
ALDH1A3-201ENST00000329841 TNXBP22105 4242 aa8.56□□□□□ -1.04
ALDH1A3-201ENST00000329841 KRTAP15-1Q3LI76 137 aa8.56□□□□□ -1.04
ALDH1A3-201ENST00000329841 LPAP08519 4548 aa8.53□□□□□ -1.04
ALDH1A3-201ENST00000329841 KRTAP3-2Q9BYR7 98 aa8.53□□□□□ -1.04
ALDH1A3-201ENST00000329841 RYR3Q15413 4870 aa8.5□□□□□ -1.05
ALDH1A3-201ENST00000329841 TNP1P09430 55 aa8.47□□□□□ -1.05
ALDH1A3-201ENST00000329841 RYR1P21817 5038 aa8.45□□□□□ -1.06
ALDH1A3-201ENST00000329841 KRTAP17-1Q9BYP8 105 aa8.41□□□□□ -1.06
ALDH1A3-201ENST00000329841 LRP2P98164 4655 aa8.37□□□□□ -1.07
ALDH1A3-201ENST00000329841 PP632Q6XCG6 107 aa8.22□□□□□ -1.09
ALDH1A3-201ENST00000329841 ABCA13Q86UQ4 5058 aa8.18□□□□□ -1.1
ALDH1A3-201ENST00000329841 LORP23490 312 aaPredicted RBP8.17□□□□□ -1.1
ALDH1A3-201ENST00000329841 EPPK1P58107 5090 aaKnown RBP8.03□□□□□ -1.12
ALDH1A3-201ENST00000329841 HERC2O95714 4834 aa8□□□□□ -1.13
ALDH1A3-201ENST00000329841 KRTAP4-1Q9BYQ7 146 aa7.94□□□□□ -1.14
ALDH1A3-201ENST00000329841 KRTAP10-10P60014 251 aa7.91□□□□□ -1.14
ALDH1A3-201ENST00000329841 MUC2Q02817 5179 aa7.86□□□□□ -1.15
ALDH1A3-201ENST00000329841 BIRC6Q9NR09 4857 aa7.85□□□□□ -1.15
ALDH1A3-201ENST00000329841 MUC17Q685J3 4493 aa7.77□□□□□ -1.17
ALDH1A3-201ENST00000329841 KRTAP19-2Q3LHN2 52 aa7.51□□□□□ -1.21
ALDH1A3-201ENST00000329841 LCE3AQ5TA76 89 aa7.49□□□□□ -1.21
ALDH1A3-201ENST00000329841 PCLOQ9Y6V0 5065 aa7.46□□□□□ -1.21
ALDH1A3-201ENST00000329841 HERC1Q15751 4861 aa7.45□□□□□ -1.22
ALDH1A3-201ENST00000329841 FAT4Q6V0I7 4981 aa7.42□□□□□ -1.22
ALDH1A3-201ENST00000329841 MT1HP80294 61 aa7.41□□□□□ -1.22
ALDH1A3-201ENST00000329841 PRO2289Q9P1D8 64 aa7.36□□□□□ -1.23
ALDH1A3-201ENST00000329841 FLGP20930 4061 aaPredicted RBP7.35□□□□□ -1.23
ALDH1A3-201ENST00000329841 OBSCNQ5VST9 7968 aa7.3□□□□□ -1.24
ALDH1A3-201ENST00000329841 MT2AP02795 61 aa7.25□□□□□ -1.25
ALDH1A3-201ENST00000329841 LCE2CQ5TA81 110 aa7.23□□□□□ -1.25
ALDH1A3-201ENST00000329841 KRTAP12-3P60328 96 aa7.23□□□□□ -1.25
ALDH1A3-201ENST00000329841 RNF213Q63HN8 5207 aa7.2□□□□□ -1.26
ALDH1A3-201ENST00000329841 MT1FP04733 61 aa7.2□□□□□ -1.26
ALDH1A3-201ENST00000329841 KRTAP10-12P60413 245 aa7.19□□□□□ -1.26
ALDH1A3-201ENST00000329841 SPRR2GQ9BYE4 73 aa7.18□□□□□ -1.26
ALDH1A3-201ENST00000329841 HMCN2Q8NDA2 5059 aa7.16□□□□□ -1.26
ALDH1A3-201ENST00000329841 CRCT1Q9UGL9 99 aa7.16□□□□□ -1.26
ALDH1A3-201ENST00000329841 INE1O15225 51 aa7.15□□□□□ -1.26
ALDH1A3-201ENST00000329841 KRTAP19-1Q8IUB9 90 aa7.06□□□□□ -1.28
ALDH1A3-201ENST00000329841 SYNE1Q8NF91 8797 aaKnown RBP7.05□□□□□ -1.28
ALDH1A3-201ENST00000329841 UBR4Q5T4S7 5183 aa7.02□□□□□ -1.29
ALDH1A3-201ENST00000329841 KRTAP9-8Q9BYQ0 159 aa6.98□□□□□ -1.29
ALDH1A3-201ENST00000329841 KRTAP23-1A1A580 65 aa6.89□□□□□ -1.31
ALDH1A3-201ENST00000329841 FSIP2Q5CZC0 6907 aa6.88□□□□□ -1.31
ALDH1A3-201ENST00000329841 SPRR5A0A1B0GTR4 108 aa6.86□□□□□ -1.31
ALDH1A3-201ENST00000329841 KRTAP19-8Q3LI54 63 aa6.85□□□□□ -1.31
ALDH1A3-201ENST00000329841 MT1BP07438 61 aa6.76□□□□□ -1.33
ALDH1A3-201ENST00000329841 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
ALDH1A3-201ENST00000329841 KRTAP10-5P60370 271 aa6.69□□□□□ -1.34
ALDH1A3-201ENST00000329841 KRTAP10-7P60409 375 aaPredicted RBP6.66□□□□□ -1.34
ALDH1A3-201ENST00000329841 MT1XP80297 61 aa6.66□□□□□ -1.34
ALDH1A3-201ENST00000329841 KRTAP8-1Q8IUC2 63 aa6.64□□□□□ -1.35
ALDH1A3-201ENST00000329841 KRTAP19-5Q3LI72 72 aa6.62□□□□□ -1.35
ALDH1A3-201ENST00000329841 USH2AO75445 5202 aa6.54□□□□□ -1.36
ALDH1A3-201ENST00000329841 LCE2BO14633 110 aa6.53□□□□□ -1.36
ALDH1A3-201ENST00000329841 DSTQ03001 7570 aaKnown RBP6.52□□□□□ -1.36
ALDH1A3-201ENST00000329841 KMT2DO14686 5537 aa6.52□□□□□ -1.37
ALDH1A3-201ENST00000329841 LCE2AQ5TA79 106 aaPredicted RBP6.5□□□□□ -1.37
ALDH1A3-201ENST00000329841 KRTAP4-8A0A0G2JLE6 195 aa6.47□□□□□ -1.37
ALDH1A3-201ENST00000329841 KRTAP4-8Q9BYQ9 185 aa6.47□□□□□ -1.37
ALDH1A3-201ENST00000329841 LCE3CQ5T5A8 94 aa6.45□□□□□ -1.38
ALDH1A3-201ENST00000329841 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
ALDH1A3-201ENST00000329841 FCGBPQ9Y6R7 5405 aaPredicted RBP6.42□□□□□ -1.38
ALDH1A3-201ENST00000329841 KRTAP12-4P60329 112 aa6.14□□□□□ -1.43
ALDH1A3-201ENST00000329841 KRTAP9-6A8MVA2 160 aa6.06□□□□□ -1.44
ALDH1A3-201ENST00000329841 MT1GP13640 62 aa6.06□□□□□ -1.44
ALDH1A3-201ENST00000329841 SPRR2FQ96RM1 72 aa6.03□□□□□ -1.44
ALDH1A3-201ENST00000329841 LCE3BQ5TA77 95 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms