RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 PP632Q6XCG6 107 aa6.63□□□□□ -1.35
DNMT3B-202ENST00000328111 KRTAP3-3Q9BYR6 98 aa6.62□□□□□ -1.35
DNMT3B-202ENST00000328111 FAT1Q14517 4588 aa6.61□□□□□ -1.35
DNMT3B-202ENST00000328111 DNAH17Q9UFH2 4485 aa6.59□□□□□ -1.35
DNMT3B-202ENST00000328111 KRTAP10-10P60014 251 aa6.58□□□□□ -1.36
DNMT3B-202ENST00000328111 LRP1BQ9NZR2 4599 aa6.57□□□□□ -1.36
DNMT3B-202ENST00000328111 KRTAP3-2Q9BYR7 98 aa6.57□□□□□ -1.36
DNMT3B-202ENST00000328111 KMT2AQ03164 3969 aa6.55□□□□□ -1.36
DNMT3B-202ENST00000328111 DNAH8Q96JB1 4490 aa6.52□□□□□ -1.36
DNMT3B-202ENST00000328111 KRTAP4-5Q9BYR2 181 aa6.52□□□□□ -1.37
DNMT3B-202ENST00000328111 DNAH2Q9P225 4427 aa6.52□□□□□ -1.37
DNMT3B-202ENST00000328111 DYNC1H1Q14204 4646 aaKnown RBP6.49□□□□□ -1.37
DNMT3B-202ENST00000328111 LYSTQ99698 3801 aa6.47□□□□□ -1.37
DNMT3B-202ENST00000328111 ALMS1Q8TCU4 4167 aa6.46□□□□□ -1.38
DNMT3B-202ENST00000328111 DNAH3Q8TD57 4116 aa6.41□□□□□ -1.38
DNMT3B-202ENST00000328111 CMYA5Q8N3K9 4069 aa6.36□□□□□ -1.39
DNMT3B-202ENST00000328111 MYCBP2O75592 4640 aa6.35□□□□□ -1.39
DNMT3B-202ENST00000328111 VPS13BQ7Z7G8 4022 aa6.33□□□□□ -1.4
DNMT3B-202ENST00000328111 RYR1P21817 5038 aa6.33□□□□□ -1.4
DNMT3B-202ENST00000328111 FRAS1Q86XX4 4008 aa6.32□□□□□ -1.4
DNMT3B-202ENST00000328111 DYNC2H1Q8NCM8 4307 aaKnown RBP6.31□□□□□ -1.4
DNMT3B-202ENST00000328111 DNAH7Q8WXX0 4024 aa6.3□□□□□ -1.4
DNMT3B-202ENST00000328111 KIAA1109Q2LD37 5005 aa6.29□□□□□ -1.4
DNMT3B-202ENST00000328111 DNAH6Q9C0G6 4158 aa6.27□□□□□ -1.4
DNMT3B-202ENST00000328111 SACSQ9NZJ4 4579 aa6.26□□□□□ -1.41
DNMT3B-202ENST00000328111 FAT2Q9NYQ8 4349 aa6.22□□□□□ -1.41
DNMT3B-202ENST00000328111 PRO2289Q9P1D8 64 aa6.22□□□□□ -1.41
DNMT3B-202ENST00000328111 HECTD4Q9Y4D8 3996 aa6.21□□□□□ -1.41
DNMT3B-202ENST00000328111 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.42
DNMT3B-202ENST00000328111 HYDINQ4G0P3 5121 aa6.21□□□□□ -1.42
DNMT3B-202ENST00000328111 LRP1Q07954 4544 aaKnown RBP6.17□□□□□ -1.42
DNMT3B-202ENST00000328111 APOBP04114 4563 aaKnown RBP6.15□□□□□ -1.42
DNMT3B-202ENST00000328111 RYR3Q15413 4870 aa6.14□□□□□ -1.43
DNMT3B-202ENST00000328111 KRTAP15-1Q3LI76 137 aa6.13□□□□□ -1.43
DNMT3B-202ENST00000328111 FAT3Q8TDW7 4589 aa6.13□□□□□ -1.43
DNMT3B-202ENST00000328111 KRTAP4-1Q9BYQ7 146 aa6.09□□□□□ -1.43
DNMT3B-202ENST00000328111 PKHD1P08F94 4074 aa6.06□□□□□ -1.44
DNMT3B-202ENST00000328111 KRTAP17-1Q9BYP8 105 aa6.02□□□□□ -1.45
DNMT3B-202ENST00000328111 KMT2CQ8NEZ4 4911 aaKnown RBP6□□□□□ -1.45
DNMT3B-202ENST00000328111 RYR2Q92736 4967 aa5.93□□□□□ -1.46
DNMT3B-202ENST00000328111 LRP2P98164 4655 aa5.9□□□□□ -1.47
DNMT3B-202ENST00000328111 HERC2O95714 4834 aa5.87□□□□□ -1.47
DNMT3B-202ENST00000328111 KRTAP10-12P60413 245 aa5.82□□□□□ -1.48
DNMT3B-202ENST00000328111 LCE3AQ5TA76 89 aa5.79□□□□□ -1.48
DNMT3B-202ENST00000328111 PKD1P98161 4303 aa5.78□□□□□ -1.48
DNMT3B-202ENST00000328111 PCLOQ9Y6V0 5065 aa5.77□□□□□ -1.49
DNMT3B-202ENST00000328111 HSPG2P98160 4391 aa5.74□□□□□ -1.49
DNMT3B-202ENST00000328111 KRTAP23-1A1A580 65 aa5.74□□□□□ -1.49
DNMT3B-202ENST00000328111 KRTAP12-3P60328 96 aa5.72□□□□□ -1.49
DNMT3B-202ENST00000328111 MT1HP80294 61 aa5.7□□□□□ -1.5
DNMT3B-202ENST00000328111 EPPK1P58107 5090 aaKnown RBP5.7□□□□□ -1.5
DNMT3B-202ENST00000328111 BIRC6Q9NR09 4857 aa5.66□□□□□ -1.5
DNMT3B-202ENST00000328111 MT2AP02795 61 aa5.65□□□□□ -1.5
DNMT3B-202ENST00000328111 SPRR2GQ9BYE4 73 aa5.64□□□□□ -1.51
DNMT3B-202ENST00000328111 LPAP08519 4548 aa5.6□□□□□ -1.51
DNMT3B-202ENST00000328111 MT1FP04733 61 aa5.6□□□□□ -1.51
DNMT3B-202ENST00000328111 FSIP2Q5CZC0 6907 aa5.5□□□□□ -1.53
DNMT3B-202ENST00000328111 ABCA13Q86UQ4 5058 aa5.5□□□□□ -1.53
DNMT3B-202ENST00000328111 KRTAP19-1Q8IUB9 90 aa5.48□□□□□ -1.53
DNMT3B-202ENST00000328111 TNXBP22105 4242 aa5.47□□□□□ -1.53
DNMT3B-202ENST00000328111 PKHD1L1Q86WI1 4243 aa5.47□□□□□ -1.53
DNMT3B-202ENST00000328111 CRCT1Q9UGL9 99 aa5.41□□□□□ -1.54
DNMT3B-202ENST00000328111 HERC1Q15751 4861 aa5.41□□□□□ -1.54
DNMT3B-202ENST00000328111 INE1O15225 51 aa5.39□□□□□ -1.55
DNMT3B-202ENST00000328111 RNF213Q63HN8 5207 aa5.37□□□□□ -1.55
DNMT3B-202ENST00000328111 LCE2CQ5TA81 110 aa5.35□□□□□ -1.55
DNMT3B-202ENST00000328111 KRTAP8-1Q8IUC2 63 aa5.34□□□□□ -1.56
DNMT3B-202ENST00000328111 UBR4Q5T4S7 5183 aa5.32□□□□□ -1.56
DNMT3B-202ENST00000328111 KRTAP19-2Q3LHN2 52 aa5.31□□□□□ -1.56
DNMT3B-202ENST00000328111 KRTAP19-8Q3LI54 63 aa5.29□□□□□ -1.56
DNMT3B-202ENST00000328111 KRTAP9-8Q9BYQ0 159 aa5.27□□□□□ -1.57
DNMT3B-202ENST00000328111 MUC17Q685J3 4493 aa5.27□□□□□ -1.57
DNMT3B-202ENST00000328111 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
DNMT3B-202ENST00000328111 KRTAP10-7P60409 375 aaPredicted RBP5.24□□□□□ -1.57
DNMT3B-202ENST00000328111 MT1BP07438 61 aa5.22□□□□□ -1.57
DNMT3B-202ENST00000328111 MT1XP80297 61 aa5.21□□□□□ -1.57
DNMT3B-202ENST00000328111 MUC2Q02817 5179 aa5.2□□□□□ -1.58
DNMT3B-202ENST00000328111 FLGP20930 4061 aaPredicted RBP5.19□□□□□ -1.58
DNMT3B-202ENST00000328111 KRTAP10-5P60370 271 aa5.18□□□□□ -1.58
DNMT3B-202ENST00000328111 LCE3CQ5T5A8 94 aa5.11□□□□□ -1.59
DNMT3B-202ENST00000328111 KRTAP9-3Q9BYQ3 159 aa5.09□□□□□ -1.59
DNMT3B-202ENST00000328111 FAT4Q6V0I7 4981 aa5.09□□□□□ -1.59
DNMT3B-202ENST00000328111 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
DNMT3B-202ENST00000328111 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
DNMT3B-202ENST00000328111 KRTAP4-8Q9BYQ9 185 aa5.01□□□□□ -1.61
DNMT3B-202ENST00000328111 HMCN2Q8NDA2 5059 aa4.96□□□□□ -1.61
DNMT3B-202ENST00000328111 SYNE1Q8NF91 8797 aaKnown RBP4.96□□□□□ -1.62
DNMT3B-202ENST00000328111 SPRR2FQ96RM1 72 aa4.92□□□□□ -1.62
DNMT3B-202ENST00000328111 LCE2BO14633 110 aa4.92□□□□□ -1.62
DNMT3B-202ENST00000328111 OBSCNQ5VST9 7968 aa4.87□□□□□ -1.63
DNMT3B-202ENST00000328111 KRTAP19-4Q3LI73 84 aa4.81□□□□□ -1.64
DNMT3B-202ENST00000328111 KRTAP4-7Q9BYR0 210 aa4.75□□□□□ -1.65
DNMT3B-202ENST00000328111 MT1GP13640 62 aa4.71□□□□□ -1.66
DNMT3B-202ENST00000328111 KRTAP9-2Q9BYQ4 174 aa4.65□□□□□ -1.66
DNMT3B-202ENST00000328111 MT1LQ93083 61 aa4.63□□□□□ -1.67
DNMT3B-202ENST00000328111 LCE2AQ5TA79 106 aaPredicted RBP4.61□□□□□ -1.67
DNMT3B-202ENST00000328111 MT1EP04732 61 aa4.61□□□□□ -1.67
DNMT3B-202ENST00000328111 USH2AO75445 5202 aa4.61□□□□□ -1.67
DNMT3B-202ENST00000328111 LCE3BQ5TA77 95 aa4.58□□□□□ -1.68
DNMT3B-202ENST00000328111 KRTAP19-3Q7Z4W3 81 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms