RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 KRTAP15-1Q3LI76 137 aa2.99□□□□□ -1.93
SSH1-202ENST00000326495 DNAH6Q9C0G6 4158 aa2.99□□□□□ -1.93
SSH1-202ENST00000326495 VPS13BQ7Z7G8 4022 aa2.97□□□□□ -1.93
SSH1-202ENST00000326495 KRTAP10-6P60371 365 aaPredicted RBP2.97□□□□□ -1.93
SSH1-202ENST00000326495 ANK3Q12955 4377 aaKnown RBP2.97□□□□□ -1.93
SSH1-202ENST00000326495 KRTAP3-1Q9BYR8 98 aa2.96□□□□□ -1.94
SSH1-202ENST00000326495 PRKDCP78527 4128 aaKnown RBP2.94□□□□□ -1.94
SSH1-202ENST00000326495 KRTAP3-3Q9BYR6 98 aa2.92□□□□□ -1.94
SSH1-202ENST00000326495 KRTAP3-2Q9BYR7 98 aa2.92□□□□□ -1.94
SSH1-202ENST00000326495 FRAS1Q86XX4 4008 aa2.91□□□□□ -1.94
SSH1-202ENST00000326495 FLGP20930 4061 aaPredicted RBP2.9□□□□□ -1.95
SSH1-202ENST00000326495 LORP23490 312 aaPredicted RBP2.9□□□□□ -1.95
SSH1-202ENST00000326495 KRTAP10-12P60413 245 aa2.89□□□□□ -1.95
SSH1-202ENST00000326495 HUWE1Q7Z6Z7 4374 aaKnown RBP2.88□□□□□ -1.95
SSH1-202ENST00000326495 VPS13DQ5THJ4 4388 aa2.81□□□□□ -1.96
SSH1-202ENST00000326495 KRTAP12-3P60328 96 aa2.79□□□□□ -1.96
SSH1-202ENST00000326495 DNAH10Q8IVF4 4471 aa2.77□□□□□ -1.97
SSH1-202ENST00000326495 MT1HL1P0DM35 61 aa2.72□□□□□ -1.97
SSH1-202ENST00000326495 KRTAP10-7P60409 375 aaPredicted RBP2.72□□□□□ -1.97
SSH1-202ENST00000326495 PKHD1P08F94 4074 aa2.7□□□□□ -1.98
SSH1-202ENST00000326495 DYNC2H1Q8NCM8 4307 aaKnown RBP2.68□□□□□ -1.98
SSH1-202ENST00000326495 DNAH11Q96DT5 4516 aa2.67□□□□□ -1.98
SSH1-202ENST00000326495 KRTAP10-4P60372 401 aaPredicted RBP2.66□□□□□ -1.98
SSH1-202ENST00000326495 FAT2Q9NYQ8 4349 aa2.66□□□□□ -1.98
SSH1-202ENST00000326495 DNAH9Q9NYC9 4486 aa2.65□□□□□ -1.98
SSH1-202ENST00000326495 LCE3AQ5TA76 89 aa2.64□□□□□ -1.99
SSH1-202ENST00000326495 DNAH17Q9UFH2 4485 aa2.62□□□□□ -1.99
SSH1-202ENST00000326495 SPRR2GQ9BYE4 73 aa2.6□□□□□ -1.99
SSH1-202ENST00000326495 CRCT1Q9UGL9 99 aa2.59□□□□□ -2
SSH1-202ENST00000326495 DNAH8Q96JB1 4490 aa2.56□□□□□ -2
SSH1-202ENST00000326495 PKHD1L1Q86WI1 4243 aa2.56□□□□□ -2
SSH1-202ENST00000326495 KRTAP8-1Q8IUC2 63 aa2.55□□□□□ -2
SSH1-202ENST00000326495 KRTAP10-5P60370 271 aa2.53□□□□□ -2
SSH1-202ENST00000326495 KRTAP4-5Q9BYR2 181 aa2.52□□□□□ -2.01
SSH1-202ENST00000326495 PLECQ15149 4684 aaKnown RBP2.51□□□□□ -2.01
SSH1-202ENST00000326495 STARD9Q9P2P6 4700 aa2.51□□□□□ -2.01
SSH1-202ENST00000326495 LCE3CQ5T5A8 94 aa2.44□□□□□ -2.02
SSH1-202ENST00000326495 DYNC1H1Q14204 4646 aaKnown RBP2.43□□□□□ -2.02
SSH1-202ENST00000326495 DNAH5Q8TE73 4624 aa2.43□□□□□ -2.02
SSH1-202ENST00000326495 PKD1P98161 4303 aa2.42□□□□□ -2.02
SSH1-202ENST00000326495 TNXBP22105 4242 aa2.42□□□□□ -2.02
SSH1-202ENST00000326495 HSPG2P98160 4391 aa2.4□□□□□ -2.02
SSH1-202ENST00000326495 SACSQ9NZJ4 4579 aa2.39□□□□□ -2.03
SSH1-202ENST00000326495 LRP1Q07954 4544 aaKnown RBP2.38□□□□□ -2.03
SSH1-202ENST00000326495 MT1HP80294 61 aa2.37□□□□□ -2.03
SSH1-202ENST00000326495 APOBP04114 4563 aaKnown RBP2.36□□□□□ -2.03
SSH1-202ENST00000326495 KRTAP19-8Q3LI54 63 aa2.36□□□□□ -2.03
SSH1-202ENST00000326495 MT2AP02795 61 aa2.36□□□□□ -2.03
SSH1-202ENST00000326495 KRTAP19-5Q3LI72 72 aa2.36□□□□□ -2.03
SSH1-202ENST00000326495 SPRR5A0A1B0GTR4 108 aa2.36□□□□□ -2.03
SSH1-202ENST00000326495 LRP1BQ9NZR2 4599 aa2.35□□□□□ -2.03
SSH1-202ENST00000326495 KRTAP4-1Q9BYQ7 146 aa2.33□□□□□ -2.04
SSH1-202ENST00000326495 SPRR2FQ96RM1 72 aa2.31□□□□□ -2.04
SSH1-202ENST00000326495 KRTAP12-4P60329 112 aa2.3□□□□□ -2.04
SSH1-202ENST00000326495 DNHD1Q96M86 4753 aa2.3□□□□□ -2.04
SSH1-202ENST00000326495 MT1FP04733 61 aa2.29□□□□□ -2.04
SSH1-202ENST00000326495 MT1GP13640 62 aa2.27□□□□□ -2.05
SSH1-202ENST00000326495 FAT1Q14517 4588 aa2.26□□□□□ -2.05
SSH1-202ENST00000326495 LCE2DQ5TA82 110 aaPredicted RBP2.25□□□□□ -2.05
SSH1-202ENST00000326495 RYR1P21817 5038 aa2.23□□□□□ -2.05
SSH1-202ENST00000326495 FAT3Q8TDW7 4589 aa2.21□□□□□ -2.06
SSH1-202ENST00000326495 MT1LQ93083 61 aa2.2□□□□□ -2.06
SSH1-202ENST00000326495 LCE2CQ5TA81 110 aa2.19□□□□□ -2.06
SSH1-202ENST00000326495 MT1XP80297 61 aa2.18□□□□□ -2.06
SSH1-202ENST00000326495 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
SSH1-202ENST00000326495 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
SSH1-202ENST00000326495 KRTAP19-1Q8IUB9 90 aa2.17□□□□□ -2.06
SSH1-202ENST00000326495 MYCBP2O75592 4640 aa2.16□□□□□ -2.06
SSH1-202ENST00000326495 SPRR2BP35325 72 aa2.16□□□□□ -2.06
SSH1-202ENST00000326495 LCE3BQ5TA77 95 aa2.16□□□□□ -2.06
SSH1-202ENST00000326495 SPRR2AP35326 72 aa2.16□□□□□ -2.06
SSH1-202ENST00000326495 LCE2BO14633 110 aa2.16□□□□□ -2.06
SSH1-202ENST00000326495 HYDINQ4G0P3 5121 aa2.14□□□□□ -2.07
SSH1-202ENST00000326495 SPRR2EP22531 72 aa2.13□□□□□ -2.07
SSH1-202ENST00000326495 MT1EP04732 61 aa2.09□□□□□ -2.08
SSH1-202ENST00000326495 SPRR2DP22532 72 aa2.09□□□□□ -2.08
SSH1-202ENST00000326495 KRTAP19-3Q7Z4W3 81 aa2.07□□□□□ -2.08
SSH1-202ENST00000326495 MUC17Q685J3 4493 aa2.07□□□□□ -2.08
SSH1-202ENST00000326495 RYR3Q15413 4870 aa2.06□□□□□ -2.08
SSH1-202ENST00000326495 PCLOQ9Y6V0 5065 aa2.06□□□□□ -2.08
SSH1-202ENST00000326495 RNF213Q63HN8 5207 aa2.06□□□□□ -2.08
SSH1-202ENST00000326495 MT1BP07438 61 aa2.06□□□□□ -2.08
SSH1-202ENST00000326495 KRTAP9-8Q9BYQ0 159 aa2.05□□□□□ -2.08
SSH1-202ENST00000326495 LCE2AQ5TA79 106 aaPredicted RBP2.04□□□□□ -2.08
SSH1-202ENST00000326495 RYR2Q92736 4967 aa2.03□□□□□ -2.08
SSH1-202ENST00000326495 KRTAP9-3Q9BYQ3 159 aa2.02□□□□□ -2.09
SSH1-202ENST00000326495 MT1MQ8N339 61 aa2□□□□□ -2.09
SSH1-202ENST00000326495 KIAA1109Q2LD37 5005 aa2□□□□□ -2.09
SSH1-202ENST00000326495 LRP2P98164 4655 aa1.99□□□□□ -2.09
SSH1-202ENST00000326495 MT1AP04731 61 aa1.98□□□□□ -2.09
SSH1-202ENST00000326495 BIRC6Q9NR09 4857 aa1.97□□□□□ -2.09
SSH1-202ENST00000326495 LCE1AQ5T7P2 110 aa1.96□□□□□ -2.1
SSH1-202ENST00000326495 KRTAP4-8A0A0G2JLE6 195 aa1.95□□□□□ -2.1
SSH1-202ENST00000326495 KRTAP4-8Q9BYQ9 185 aa1.95□□□□□ -2.1
SSH1-202ENST00000326495 ABCA13Q86UQ4 5058 aa1.95□□□□□ -2.1
SSH1-202ENST00000326495 KRTAP17-1Q9BYP8 105 aa1.94□□□□□ -2.1
SSH1-202ENST00000326495 KRTAP19-6Q3LI70 58 aa1.94□□□□□ -2.1
SSH1-202ENST00000326495 PRM1P04553 51 aa1.93□□□□□ -2.1
SSH1-202ENST00000326495 KMT2CQ8NEZ4 4911 aaKnown RBP1.93□□□□□ -2.1
SSH1-202ENST00000326495 UBR4Q5T4S7 5183 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms