RNA–Protein interactions for RNA: ENST00000324306.10

ZKSCAN1-201, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN1, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-201ENST00000324306 MT1HL1P0DM35 61 aa3.97□□□□□ -1.77
ZKSCAN1-201ENST00000324306 DNAH3Q8TD57 4116 aa3.95□□□□□ -1.78
ZKSCAN1-201ENST00000324306 LYSTQ99698 3801 aa3.94□□□□□ -1.78
ZKSCAN1-201ENST00000324306 KRTAP10-4P60372 401 aaPredicted RBP3.93□□□□□ -1.78
ZKSCAN1-201ENST00000324306 HUWE1Q7Z6Z7 4374 aaKnown RBP3.92□□□□□ -1.78
ZKSCAN1-201ENST00000324306 DNAH7Q8WXX0 4024 aa3.9□□□□□ -1.79
ZKSCAN1-201ENST00000324306 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
ZKSCAN1-201ENST00000324306 CMYA5Q8N3K9 4069 aa3.85□□□□□ -1.79
ZKSCAN1-201ENST00000324306 CRCT1Q9UGL9 99 aa3.82□□□□□ -1.8
ZKSCAN1-201ENST00000324306 KRTAP10-5P60370 271 aa3.79□□□□□ -1.8
ZKSCAN1-201ENST00000324306 DNAH6Q9C0G6 4158 aa3.75□□□□□ -1.81
ZKSCAN1-201ENST00000324306 LORP23490 312 aaPredicted RBP3.75□□□□□ -1.81
ZKSCAN1-201ENST00000324306 SPRR2GQ9BYE4 73 aa3.71□□□□□ -1.82
ZKSCAN1-201ENST00000324306 KMT2AQ03164 3969 aa3.71□□□□□ -1.82
ZKSCAN1-201ENST00000324306 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
ZKSCAN1-201ENST00000324306 DNAH1Q9P2D7 4330 aa3.68□□□□□ -1.82
ZKSCAN1-201ENST00000324306 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
ZKSCAN1-201ENST00000324306 VPS13BQ7Z7G8 4022 aa3.66□□□□□ -1.82
ZKSCAN1-201ENST00000324306 PRKDCP78527 4128 aaKnown RBP3.64□□□□□ -1.83
ZKSCAN1-201ENST00000324306 DNAH2Q9P225 4427 aa3.64□□□□□ -1.83
ZKSCAN1-201ENST00000324306 KRTAP4-5Q9BYR2 181 aa3.64□□□□□ -1.83
ZKSCAN1-201ENST00000324306 DNAH9Q9NYC9 4486 aa3.6□□□□□ -1.83
ZKSCAN1-201ENST00000324306 STARD9Q9P2P6 4700 aa3.58□□□□□ -1.84
ZKSCAN1-201ENST00000324306 DYNC2H1Q8NCM8 4307 aaKnown RBP3.56□□□□□ -1.84
ZKSCAN1-201ENST00000324306 FRAS1Q86XX4 4008 aa3.54□□□□□ -1.84
ZKSCAN1-201ENST00000324306 DNAH10Q8IVF4 4471 aa3.54□□□□□ -1.84
ZKSCAN1-201ENST00000324306 KRTAP19-5Q3LI72 72 aa3.53□□□□□ -1.84
ZKSCAN1-201ENST00000324306 SPRR5A0A1B0GTR4 108 aa3.53□□□□□ -1.84
ZKSCAN1-201ENST00000324306 PLECQ15149 4684 aaKnown RBP3.52□□□□□ -1.85
ZKSCAN1-201ENST00000324306 DNAH5Q8TE73 4624 aa3.51□□□□□ -1.85
ZKSCAN1-201ENST00000324306 KRTAP10-7P60409 375 aaPredicted RBP3.5□□□□□ -1.85
ZKSCAN1-201ENST00000324306 VPS13DQ5THJ4 4388 aa3.5□□□□□ -1.85
ZKSCAN1-201ENST00000324306 MT1HP80294 61 aa3.49□□□□□ -1.85
ZKSCAN1-201ENST00000324306 MT2AP02795 61 aa3.48□□□□□ -1.85
ZKSCAN1-201ENST00000324306 FAT2Q9NYQ8 4349 aa3.47□□□□□ -1.85
ZKSCAN1-201ENST00000324306 DNAH11Q96DT5 4516 aa3.46□□□□□ -1.86
ZKSCAN1-201ENST00000324306 KRTAP4-1Q9BYQ7 146 aa3.42□□□□□ -1.86
ZKSCAN1-201ENST00000324306 DNAH17Q9UFH2 4485 aa3.4□□□□□ -1.87
ZKSCAN1-201ENST00000324306 MT1FP04733 61 aa3.37□□□□□ -1.87
ZKSCAN1-201ENST00000324306 KRTAP19-8Q3LI54 63 aa3.37□□□□□ -1.87
ZKSCAN1-201ENST00000324306 PKHD1P08F94 4074 aa3.37□□□□□ -1.87
ZKSCAN1-201ENST00000324306 DYNC1H1Q14204 4646 aaKnown RBP3.35□□□□□ -1.87
ZKSCAN1-201ENST00000324306 KRTAP12-4P60329 112 aa3.33□□□□□ -1.88
ZKSCAN1-201ENST00000324306 FLGP20930 4061 aaPredicted RBP3.32□□□□□ -1.88
ZKSCAN1-201ENST00000324306 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
ZKSCAN1-201ENST00000324306 DNAH8Q96JB1 4490 aa3.31□□□□□ -1.88
ZKSCAN1-201ENST00000324306 DNHD1Q96M86 4753 aa3.29□□□□□ -1.88
ZKSCAN1-201ENST00000324306 LRP1BQ9NZR2 4599 aa3.26□□□□□ -1.89
ZKSCAN1-201ENST00000324306 MT1XP80297 61 aa3.25□□□□□ -1.89
ZKSCAN1-201ENST00000324306 RYR1P21817 5038 aa3.25□□□□□ -1.89
ZKSCAN1-201ENST00000324306 KRTAP19-1Q8IUB9 90 aa3.23□□□□□ -1.89
ZKSCAN1-201ENST00000324306 LCE3BQ5TA77 95 aa3.23□□□□□ -1.89
ZKSCAN1-201ENST00000324306 RYR3Q15413 4870 aa3.22□□□□□ -1.89
ZKSCAN1-201ENST00000324306 PKD1P98161 4303 aa3.21□□□□□ -1.9
ZKSCAN1-201ENST00000324306 LRP1Q07954 4544 aaKnown RBP3.21□□□□□ -1.9
ZKSCAN1-201ENST00000324306 PKHD1L1Q86WI1 4243 aa3.2□□□□□ -1.9
ZKSCAN1-201ENST00000324306 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
ZKSCAN1-201ENST00000324306 PCLOQ9Y6V0 5065 aa3.18□□□□□ -1.9
ZKSCAN1-201ENST00000324306 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
ZKSCAN1-201ENST00000324306 MT1GP13640 62 aa3.16□□□□□ -1.9
ZKSCAN1-201ENST00000324306 APOBP04114 4563 aaKnown RBP3.16□□□□□ -1.9
ZKSCAN1-201ENST00000324306 SACSQ9NZJ4 4579 aa3.12□□□□□ -1.91
ZKSCAN1-201ENST00000324306 MYCBP2O75592 4640 aa3.12□□□□□ -1.91
ZKSCAN1-201ENST00000324306 TNXBP22105 4242 aa3.1□□□□□ -1.91
ZKSCAN1-201ENST00000324306 MT1BP07438 61 aa3.09□□□□□ -1.91
ZKSCAN1-201ENST00000324306 FAT1Q14517 4588 aa3.08□□□□□ -1.92
ZKSCAN1-201ENST00000324306 MT1LQ93083 61 aa3.08□□□□□ -1.92
ZKSCAN1-201ENST00000324306 RYR2Q92736 4967 aa3.08□□□□□ -1.92
ZKSCAN1-201ENST00000324306 SPRR2EP22531 72 aa3.07□□□□□ -1.92
ZKSCAN1-201ENST00000324306 SPRR2BP35325 72 aa3.07□□□□□ -1.92
ZKSCAN1-201ENST00000324306 SPRR2AP35326 72 aa3.07□□□□□ -1.92
ZKSCAN1-201ENST00000324306 LCE2BO14633 110 aa3.06□□□□□ -1.92
ZKSCAN1-201ENST00000324306 KRTAP17-1Q9BYP8 105 aa3.05□□□□□ -1.92
ZKSCAN1-201ENST00000324306 KMT2CQ8NEZ4 4911 aaKnown RBP3.05□□□□□ -1.92
ZKSCAN1-201ENST00000324306 MT3P25713 68 aa3.03□□□□□ -1.92
ZKSCAN1-201ENST00000324306 SPRR2DP22532 72 aa3.02□□□□□ -1.93
ZKSCAN1-201ENST00000324306 MT1EP04732 61 aa3.01□□□□□ -1.93
ZKSCAN1-201ENST00000324306 KRTAP9-8Q9BYQ0 159 aa3□□□□□ -1.93
ZKSCAN1-201ENST00000324306 HSPG2P98160 4391 aa3□□□□□ -1.93
ZKSCAN1-201ENST00000324306 HERC1Q15751 4861 aa3□□□□□ -1.93
ZKSCAN1-201ENST00000324306 KRTAP19-3Q7Z4W3 81 aa3□□□□□ -1.93
ZKSCAN1-201ENST00000324306 KRTAP9-3Q9BYQ3 159 aa2.97□□□□□ -1.93
ZKSCAN1-201ENST00000324306 KIAA1109Q2LD37 5005 aa2.97□□□□□ -1.93
ZKSCAN1-201ENST00000324306 HYDINQ4G0P3 5121 aa2.97□□□□□ -1.93
ZKSCAN1-201ENST00000324306 PRM1P04553 51 aa2.94□□□□□ -1.94
ZKSCAN1-201ENST00000324306 LCE2CQ5TA81 110 aa2.93□□□□□ -1.94
ZKSCAN1-201ENST00000324306 BIRC6Q9NR09 4857 aa2.92□□□□□ -1.94
ZKSCAN1-201ENST00000324306 FAT3Q8TDW7 4589 aa2.9□□□□□ -1.95
ZKSCAN1-201ENST00000324306 KRTAP2-3P0C7H8 128 aa2.89□□□□□ -1.95
ZKSCAN1-201ENST00000324306 KRTAP2-4Q9BYR9 128 aa2.89□□□□□ -1.95
ZKSCAN1-201ENST00000324306 KRTAP2-1Q9BYU5 128 aa2.89□□□□□ -1.95
ZKSCAN1-201ENST00000324306 KRTAP4-8A0A0G2JLE6 195 aa2.87□□□□□ -1.95
ZKSCAN1-201ENST00000324306 KRTAP4-8Q9BYQ9 185 aa2.87□□□□□ -1.95
ZKSCAN1-201ENST00000324306 MT1MQ8N339 61 aa2.85□□□□□ -1.95
ZKSCAN1-201ENST00000324306 KRTAP19-2Q3LHN2 52 aa2.85□□□□□ -1.95
ZKSCAN1-201ENST00000324306 LRP2P98164 4655 aa2.85□□□□□ -1.95
ZKSCAN1-201ENST00000324306 HERC2O95714 4834 aa2.83□□□□□ -1.96
ZKSCAN1-201ENST00000324306 MT1AP04731 61 aa2.81□□□□□ -1.96
ZKSCAN1-201ENST00000324306 ABCA13Q86UQ4 5058 aa2.8□□□□□ -1.96
ZKSCAN1-201ENST00000324306 EPPK1P58107 5090 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms