RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 KRTAP13-4Q3LI77 160 aa8.18□□□□□ -1.1
PPP3CA-201ENST00000323055 DNAH17Q9UFH2 4485 aa8.18□□□□□ -1.1
PPP3CA-201ENST00000323055 KMT2AQ03164 3969 aa8.16□□□□□ -1.1
PPP3CA-201ENST00000323055 DYNC1H1Q14204 4646 aaKnown RBP8.15□□□□□ -1.1
PPP3CA-201ENST00000323055 NDUFAF8A1L188 74 aa8.15□□□□□ -1.11
PPP3CA-201ENST00000323055 LRP1BQ9NZR2 4599 aa8.14□□□□□ -1.11
PPP3CA-201ENST00000323055 KRTAP12-1P59990 96 aa8.13□□□□□ -1.11
PPP3CA-201ENST00000323055 KRTAP3-3Q9BYR6 98 aa8.09□□□□□ -1.11
PPP3CA-201ENST00000323055 DNAH2Q9P225 4427 aa8.09□□□□□ -1.12
PPP3CA-201ENST00000323055 A0A0A0MQY5 61 aa8.05□□□□□ -1.12
PPP3CA-201ENST00000323055 LYSTQ99698 3801 aa8.05□□□□□ -1.12
PPP3CA-201ENST00000323055 DNAH8Q96JB1 4490 aa8.05□□□□□ -1.12
PPP3CA-201ENST00000323055 PP632Q6XCG6 107 aa8.04□□□□□ -1.12
PPP3CA-201ENST00000323055 KRTAP3-2Q9BYR7 98 aa8□□□□□ -1.13
PPP3CA-201ENST00000323055 RYR1P21817 5038 aa8□□□□□ -1.13
PPP3CA-201ENST00000323055 DNAH3Q8TD57 4116 aa7.98□□□□□ -1.13
PPP3CA-201ENST00000323055 KIAA1109Q2LD37 5005 aa7.96□□□□□ -1.14
PPP3CA-201ENST00000323055 CMYA5Q8N3K9 4069 aa7.94□□□□□ -1.14
PPP3CA-201ENST00000323055 DYNC2H1Q8NCM8 4307 aaKnown RBP7.89□□□□□ -1.15
PPP3CA-201ENST00000323055 MYCBP2O75592 4640 aa7.86□□□□□ -1.15
PPP3CA-201ENST00000323055 SACSQ9NZJ4 4579 aa7.85□□□□□ -1.15
PPP3CA-201ENST00000323055 VPS13BQ7Z7G8 4022 aa7.82□□□□□ -1.16
PPP3CA-201ENST00000323055 PRO2289Q9P1D8 64 aa7.82□□□□□ -1.16
PPP3CA-201ENST00000323055 FAT2Q9NYQ8 4349 aa7.81□□□□□ -1.16
PPP3CA-201ENST00000323055 DNAH7Q8WXX0 4024 aa7.81□□□□□ -1.16
PPP3CA-201ENST00000323055 RYR3Q15413 4870 aa7.78□□□□□ -1.16
PPP3CA-201ENST00000323055 DNAH6Q9C0G6 4158 aa7.78□□□□□ -1.16
PPP3CA-201ENST00000323055 FRAS1Q86XX4 4008 aa7.72□□□□□ -1.17
PPP3CA-201ENST00000323055 LRP1Q07954 4544 aaKnown RBP7.71□□□□□ -1.18
PPP3CA-201ENST00000323055 APOBP04114 4563 aaKnown RBP7.71□□□□□ -1.18
PPP3CA-201ENST00000323055 KRTAP17-1Q9BYP8 105 aa7.68□□□□□ -1.18
PPP3CA-201ENST00000323055 HYDINQ4G0P3 5121 aa7.68□□□□□ -1.18
PPP3CA-201ENST00000323055 LORP23490 312 aaPredicted RBP7.68□□□□□ -1.18
PPP3CA-201ENST00000323055 KRTAP4-1Q9BYQ7 146 aa7.66□□□□□ -1.18
PPP3CA-201ENST00000323055 FAT3Q8TDW7 4589 aa7.65□□□□□ -1.18
PPP3CA-201ENST00000323055 HECTD4Q9Y4D8 3996 aa7.64□□□□□ -1.19
PPP3CA-201ENST00000323055 PKHD1P08F94 4074 aa7.56□□□□□ -1.2
PPP3CA-201ENST00000323055 RYR2Q92736 4967 aa7.54□□□□□ -1.2
PPP3CA-201ENST00000323055 KMT2CQ8NEZ4 4911 aaKnown RBP7.43□□□□□ -1.22
PPP3CA-201ENST00000323055 HERC2O95714 4834 aa7.37□□□□□ -1.23
PPP3CA-201ENST00000323055 LRP2P98164 4655 aa7.34□□□□□ -1.23
PPP3CA-201ENST00000323055 KRTAP15-1Q3LI76 137 aa7.26□□□□□ -1.25
PPP3CA-201ENST00000323055 HSPG2P98160 4391 aa7.25□□□□□ -1.25
PPP3CA-201ENST00000323055 PKD1P98161 4303 aa7.23□□□□□ -1.25
PPP3CA-201ENST00000323055 KRTAP10-12P60413 245 aa7.23□□□□□ -1.25
PPP3CA-201ENST00000323055 MT1HP80294 61 aa7.23□□□□□ -1.25
PPP3CA-201ENST00000323055 LCE3AQ5TA76 89 aa7.13□□□□□ -1.27
PPP3CA-201ENST00000323055 MT2AP02795 61 aa7.13□□□□□ -1.27
PPP3CA-201ENST00000323055 KRTAP12-3P60328 96 aa7.06□□□□□ -1.28
PPP3CA-201ENST00000323055 MT1FP04733 61 aa7.05□□□□□ -1.28
PPP3CA-201ENST00000323055 BIRC6Q9NR09 4857 aa7.05□□□□□ -1.28
PPP3CA-201ENST00000323055 EPPK1P58107 5090 aaKnown RBP7.04□□□□□ -1.28
PPP3CA-201ENST00000323055 LPAP08519 4548 aa7.02□□□□□ -1.29
PPP3CA-201ENST00000323055 SPRR2GQ9BYE4 73 aa7□□□□□ -1.29
PPP3CA-201ENST00000323055 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
PPP3CA-201ENST00000323055 PCLOQ9Y6V0 5065 aa6.9□□□□□ -1.3
PPP3CA-201ENST00000323055 ABCA13Q86UQ4 5058 aa6.9□□□□□ -1.3
PPP3CA-201ENST00000323055 HERC1Q15751 4861 aa6.83□□□□□ -1.32
PPP3CA-201ENST00000323055 KRTAP19-1Q8IUB9 90 aa6.82□□□□□ -1.32
PPP3CA-201ENST00000323055 CRCT1Q9UGL9 99 aa6.81□□□□□ -1.32
PPP3CA-201ENST00000323055 TNXBP22105 4242 aa6.8□□□□□ -1.32
PPP3CA-201ENST00000323055 PKHD1L1Q86WI1 4243 aa6.79□□□□□ -1.32
PPP3CA-201ENST00000323055 LCE2CQ5TA81 110 aa6.75□□□□□ -1.33
PPP3CA-201ENST00000323055 KRTAP8-1Q8IUC2 63 aa6.66□□□□□ -1.34
PPP3CA-201ENST00000323055 KRTAP9-8Q9BYQ0 159 aa6.65□□□□□ -1.35
PPP3CA-201ENST00000323055 KRTAP19-2Q3LHN2 52 aa6.61□□□□□ -1.35
PPP3CA-201ENST00000323055 KRTAP19-8Q3LI54 63 aa6.6□□□□□ -1.35
PPP3CA-201ENST00000323055 MUC17Q685J3 4493 aa6.54□□□□□ -1.36
PPP3CA-201ENST00000323055 MT1BP07438 61 aa6.53□□□□□ -1.36
PPP3CA-201ENST00000323055 KRTAP10-7P60409 375 aaPredicted RBP6.52□□□□□ -1.37
PPP3CA-201ENST00000323055 KRTAP19-5Q3LI72 72 aa6.51□□□□□ -1.37
PPP3CA-201ENST00000323055 MUC2Q02817 5179 aa6.49□□□□□ -1.37
PPP3CA-201ENST00000323055 MT1XP80297 61 aa6.49□□□□□ -1.37
PPP3CA-201ENST00000323055 RNF213Q63HN8 5207 aa6.48□□□□□ -1.37
PPP3CA-201ENST00000323055 KRTAP10-5P60370 271 aa6.44□□□□□ -1.38
PPP3CA-201ENST00000323055 KRTAP9-3Q9BYQ3 159 aa6.42□□□□□ -1.38
PPP3CA-201ENST00000323055 FLGP20930 4061 aaPredicted RBP6.42□□□□□ -1.38
PPP3CA-201ENST00000323055 UBR4Q5T4S7 5183 aa6.39□□□□□ -1.39
PPP3CA-201ENST00000323055 FAT4Q6V0I7 4981 aa6.37□□□□□ -1.39
PPP3CA-201ENST00000323055 FSIP2Q5CZC0 6907 aa6.37□□□□□ -1.39
PPP3CA-201ENST00000323055 INE1O15225 51 aa6.37□□□□□ -1.39
PPP3CA-201ENST00000323055 SPRR2FQ96RM1 72 aa6.3□□□□□ -1.4
PPP3CA-201ENST00000323055 KRTAP4-8A0A0G2JLE6 195 aa6.28□□□□□ -1.4
PPP3CA-201ENST00000323055 KRTAP4-8Q9BYQ9 185 aa6.28□□□□□ -1.4
PPP3CA-201ENST00000323055 HMCN2Q8NDA2 5059 aa6.27□□□□□ -1.41
PPP3CA-201ENST00000323055 LCE3CQ5T5A8 94 aa6.27□□□□□ -1.41
PPP3CA-201ENST00000323055 LCE2BO14633 110 aa6.24□□□□□ -1.41
PPP3CA-201ENST00000323055 SPRR5A0A1B0GTR4 108 aa5.95□□□□□ -1.46
PPP3CA-201ENST00000323055 LCE2AQ5TA79 106 aaPredicted RBP5.95□□□□□ -1.46
PPP3CA-201ENST00000323055 KRTAP9-6A0A140TA67 174 aa5.92□□□□□ -1.46
PPP3CA-201ENST00000323055 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
PPP3CA-201ENST00000323055 KRTAP4-7Q9BYR0 210 aa5.89□□□□□ -1.47
PPP3CA-201ENST00000323055 MT1GP13640 62 aa5.88□□□□□ -1.47
PPP3CA-201ENST00000323055 KRTAP9-2Q9BYQ4 174 aa5.82□□□□□ -1.48
PPP3CA-201ENST00000323055 SYNE1Q8NF91 8797 aaKnown RBP5.81□□□□□ -1.48
PPP3CA-201ENST00000323055 SPRR2EP22531 72 aa5.8□□□□□ -1.48
PPP3CA-201ENST00000323055 SPRR2BP35325 72 aa5.8□□□□□ -1.48
PPP3CA-201ENST00000323055 SPRR2AP35326 72 aa5.8□□□□□ -1.48
PPP3CA-201ENST00000323055 MT1LQ93083 61 aa5.75□□□□□ -1.49
PPP3CA-201ENST00000323055 MT1EP04732 61 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms