RNA–Protein interactions for RNA: ENST00000322349.12

EEA1-201, Transcript of early endosome antigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EEA1, Length 9,875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEA1-201ENST00000322349 OTOGQ6ZRI0 2925 aa4.17□□□□□ -1.74
EEA1-201ENST00000322349 CSMD3Q7Z407 3707 aa4.16□□□□□ -1.74
EEA1-201ENST00000322349 VPS13CQ709C8 3753 aa4.16□□□□□ -1.74
EEA1-201ENST00000322349 MT1HP80294 61 aa4.15□□□□□ -1.75
EEA1-201ENST00000322349 KRTAP10-7P60409 375 aaPredicted RBP4.14□□□□□ -1.75
EEA1-201ENST00000322349 BSNQ9UPA5 3926 aa4.11□□□□□ -1.75
EEA1-201ENST00000322349 KRTAP4-1Q9BYQ7 146 aa4.08□□□□□ -1.76
EEA1-201ENST00000322349 SPRR2EP22531 72 aa4.06□□□□□ -1.76
EEA1-201ENST00000322349 SPRR2BP35325 72 aa4.06□□□□□ -1.76
EEA1-201ENST00000322349 SPRR2AP35326 72 aa4.06□□□□□ -1.76
EEA1-201ENST00000322349 DNAH9Q9NYC9 4486 aa4.05□□□□□ -1.76
EEA1-201ENST00000322349 AKAP9Q99996 3911 aa4.03□□□□□ -1.76
EEA1-201ENST00000322349 DNAH1Q9P2D7 4330 aa4.03□□□□□ -1.76
EEA1-201ENST00000322349 MT2AP02795 61 aa4.01□□□□□ -1.77
EEA1-201ENST00000322349 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
EEA1-201ENST00000322349 KRTAP19-5Q3LI72 72 aa3.98□□□□□ -1.77
EEA1-201ENST00000322349 DNAH2Q9P225 4427 aa3.94□□□□□ -1.78
EEA1-201ENST00000322349 MT1FP04733 61 aa3.93□□□□□ -1.78
EEA1-201ENST00000322349 SPRR2DP22532 72 aa3.91□□□□□ -1.78
EEA1-201ENST00000322349 DNAH10Q8IVF4 4471 aa3.88□□□□□ -1.79
EEA1-201ENST00000322349 DNAH5Q8TE73 4624 aa3.87□□□□□ -1.79
EEA1-201ENST00000322349 FAT2Q9NYQ8 4349 aa3.84□□□□□ -1.8
EEA1-201ENST00000322349 LCE3BQ5TA77 95 aa3.83□□□□□ -1.8
EEA1-201ENST00000322349 SPRR2GQ9BYE4 73 aa3.82□□□□□ -1.8
EEA1-201ENST00000322349 ZNF469Q96JG9 3925 aaPredicted RBP3.81□□□□□ -1.8
EEA1-201ENST00000322349 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
EEA1-201ENST00000322349 LCE2BO14633 110 aa3.8□□□□□ -1.8
EEA1-201ENST00000322349 PLECQ15149 4684 aaKnown RBP3.78□□□□□ -1.8
EEA1-201ENST00000322349 DNAH17Q9UFH2 4485 aa3.76□□□□□ -1.81
EEA1-201ENST00000322349 DNAH3Q8TD57 4116 aa3.76□□□□□ -1.81
EEA1-201ENST00000322349 DNAH8Q96JB1 4490 aa3.75□□□□□ -1.81
EEA1-201ENST00000322349 DNAH11Q96DT5 4516 aa3.74□□□□□ -1.81
EEA1-201ENST00000322349 MT1GP13640 62 aa3.73□□□□□ -1.81
EEA1-201ENST00000322349 ANK2Q01484 3957 aa3.72□□□□□ -1.81
EEA1-201ENST00000322349 LRP1BQ9NZR2 4599 aa3.72□□□□□ -1.81
EEA1-201ENST00000322349 VPS13BQ7Z7G8 4022 aa3.71□□□□□ -1.82
EEA1-201ENST00000322349 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
EEA1-201ENST00000322349 FAT1Q14517 4588 aa3.69□□□□□ -1.82
EEA1-201ENST00000322349 VPS13DQ5THJ4 4388 aa3.68□□□□□ -1.82
EEA1-201ENST00000322349 DYNC2H1Q8NCM8 4307 aaKnown RBP3.67□□□□□ -1.82
EEA1-201ENST00000322349 KMT2AQ03164 3969 aa3.66□□□□□ -1.82
EEA1-201ENST00000322349 FRAS1Q86XX4 4008 aa3.66□□□□□ -1.82
EEA1-201ENST00000322349 PRKDCP78527 4128 aaKnown RBP3.65□□□□□ -1.83
EEA1-201ENST00000322349 SACSQ9NZJ4 4579 aa3.65□□□□□ -1.83
EEA1-201ENST00000322349 KRTAP19-1Q8IUB9 90 aa3.62□□□□□ -1.83
EEA1-201ENST00000322349 DNAH7Q8WXX0 4024 aa3.62□□□□□ -1.83
EEA1-201ENST00000322349 LCE2CQ5TA81 110 aa3.62□□□□□ -1.83
EEA1-201ENST00000322349 KRTAP17-1Q9BYP8 105 aa3.62□□□□□ -1.83
EEA1-201ENST00000322349 STARD9Q9P2P6 4700 aa3.61□□□□□ -1.83
EEA1-201ENST00000322349 DYNC1H1Q14204 4646 aaKnown RBP3.6□□□□□ -1.83
EEA1-201ENST00000322349 LCE2DQ5TA82 110 aaPredicted RBP3.59□□□□□ -1.83
EEA1-201ENST00000322349 KRTAP4-8A0A0G2JLE6 195 aa3.59□□□□□ -1.83
EEA1-201ENST00000322349 KRTAP4-8Q9BYQ9 185 aa3.59□□□□□ -1.83
EEA1-201ENST00000322349 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.84
EEA1-201ENST00000322349 MT4P47944 62 aa3.57□□□□□ -1.84
EEA1-201ENST00000322349 FAT3Q8TDW7 4589 aa3.52□□□□□ -1.85
EEA1-201ENST00000322349 LYSTQ99698 3801 aa3.5□□□□□ -1.85
EEA1-201ENST00000322349 DNAH6Q9C0G6 4158 aa3.5□□□□□ -1.85
EEA1-201ENST00000322349 MT1XP80297 61 aa3.5□□□□□ -1.85
EEA1-201ENST00000322349 CMYA5Q8N3K9 4069 aa3.5□□□□□ -1.85
EEA1-201ENST00000322349 RYR1P21817 5038 aa3.5□□□□□ -1.85
EEA1-201ENST00000322349 APOBP04114 4563 aaKnown RBP3.48□□□□□ -1.85
EEA1-201ENST00000322349 DNHD1Q96M86 4753 aa3.48□□□□□ -1.85
EEA1-201ENST00000322349 KRTAP19-8Q3LI54 63 aa3.46□□□□□ -1.86
EEA1-201ENST00000322349 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
EEA1-201ENST00000322349 MT1BP07438 61 aa3.43□□□□□ -1.86
EEA1-201ENST00000322349 KRTAP9-8Q9BYQ0 159 aa3.42□□□□□ -1.86
EEA1-201ENST00000322349 KRTAP9-2Q9BYQ4 174 aa3.4□□□□□ -1.86
EEA1-201ENST00000322349 PKHD1L1Q86WI1 4243 aa3.4□□□□□ -1.87
EEA1-201ENST00000322349 KRTAP19-4Q3LI73 84 aa3.39□□□□□ -1.87
EEA1-201ENST00000322349 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
EEA1-201ENST00000322349 LPAP08519 4548 aa3.38□□□□□ -1.87
EEA1-201ENST00000322349 KRTAP4-7Q9BYR0 210 aa3.36□□□□□ -1.87
EEA1-201ENST00000322349 LRP1Q07954 4544 aaKnown RBP3.36□□□□□ -1.87
EEA1-201ENST00000322349 KRTAP9-3Q9BYQ3 159 aa3.36□□□□□ -1.87
EEA1-201ENST00000322349 HSPG2P98160 4391 aa3.34□□□□□ -1.87
EEA1-201ENST00000322349 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
EEA1-201ENST00000322349 KRTAP19-3Q7Z4W3 81 aa3.33□□□□□ -1.88
EEA1-201ENST00000322349 LCE1DQ5T752 114 aa3.32□□□□□ -1.88
EEA1-201ENST00000322349 PKD1P98161 4303 aa3.31□□□□□ -1.88
EEA1-201ENST00000322349 RYR3Q15413 4870 aa3.31□□□□□ -1.88
EEA1-201ENST00000322349 KRTAP9-6A0A140TA67 174 aa3.27□□□□□ -1.89
EEA1-201ENST00000322349 MYCBP2O75592 4640 aa3.24□□□□□ -1.89
EEA1-201ENST00000322349 LOC100996750A0A140TA64 210 aa3.24□□□□□ -1.89
EEA1-201ENST00000322349 HECTD4Q9Y4D8 3996 aa3.23□□□□□ -1.89
EEA1-201ENST00000322349 PKHD1P08F94 4074 aa3.21□□□□□ -1.89
EEA1-201ENST00000322349 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
EEA1-201ENST00000322349 LCE5AQ5TCM9 118 aa3.21□□□□□ -1.9
EEA1-201ENST00000322349 MT1LQ93083 61 aa3.2□□□□□ -1.9
EEA1-201ENST00000322349 KRTAP4-3Q9BYR4 195 aa3.2□□□□□ -1.9
EEA1-201ENST00000322349 MT3P25713 68 aa3.19□□□□□ -1.9
EEA1-201ENST00000322349 KRTAP19-6Q3LI70 58 aa3.18□□□□□ -1.9
EEA1-201ENST00000322349 MT1EP04732 61 aa3.18□□□□□ -1.9
EEA1-201ENST00000322349 PRM1P04553 51 aa3.14□□□□□ -1.91
EEA1-201ENST00000322349 MT1MQ8N339 61 aa3.13□□□□□ -1.91
EEA1-201ENST00000322349 TNXBP22105 4242 aa3.12□□□□□ -1.91
EEA1-201ENST00000322349 HERC1Q15751 4861 aa3.11□□□□□ -1.91
EEA1-201ENST00000322349 KRTAP9-7A8MTY7 169 aa3.09□□□□□ -1.91
EEA1-201ENST00000322349 KRTAP4-9Q9BYQ8 210 aa3.06□□□□□ -1.92
EEA1-201ENST00000322349 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms