RNA–Protein interactions for RNA: ENST00000322147.8

LTBP3-202, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBP3, Length 4,046 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-202ENST00000322147 DNAH2Q9P225 4427 aa9.28□□□□□ -0.92
LTBP3-202ENST00000322147 DYNC2H1Q8NCM8 4307 aaKnown RBP9.27□□□□□ -0.93
LTBP3-202ENST00000322147 TPRXLQ17RH7 258 aa9.25□□□□□ -0.93
LTBP3-202ENST00000322147 LRP1BQ9NZR2 4599 aa9.23□□□□□ -0.93
LTBP3-202ENST00000322147 DNAH6Q9C0G6 4158 aa9.2□□□□□ -0.94
LTBP3-202ENST00000322147 KRTAP13-4Q3LI77 160 aa9.19□□□□□ -0.94
LTBP3-202ENST00000322147 HYDINQ4G0P3 5121 aa9.17□□□□□ -0.94
LTBP3-202ENST00000322147 FAT1Q14517 4588 aa9.17□□□□□ -0.94
LTBP3-202ENST00000322147 KRTAP10-6P60371 365 aaPredicted RBP9.14□□□□□ -0.95
LTBP3-202ENST00000322147 DNAH5Q8TE73 4624 aa9.13□□□□□ -0.95
LTBP3-202ENST00000322147 KMT2CQ8NEZ4 4911 aaKnown RBP9.13□□□□□ -0.95
LTBP3-202ENST00000322147 KRTAP12-2P59991 146 aa9.09□□□□□ -0.95
LTBP3-202ENST00000322147 VPS13BQ7Z7G8 4022 aa9.03□□□□□ -0.96
LTBP3-202ENST00000322147 TNP1P09430 55 aa9.02□□□□□ -0.96
LTBP3-202ENST00000322147 MYCBP2O75592 4640 aa9.01□□□□□ -0.97
LTBP3-202ENST00000322147 A0A0A0MQY5 61 aa9□□□□□ -0.97
LTBP3-202ENST00000322147 KRTAP3-3Q9BYR6 98 aa9□□□□□ -0.97
LTBP3-202ENST00000322147 KRTAP3-2Q9BYR7 98 aa8.99□□□□□ -0.97
LTBP3-202ENST00000322147 SACSQ9NZJ4 4579 aa8.98□□□□□ -0.97
LTBP3-202ENST00000322147 KRTAP4-5Q9BYR2 181 aa8.96□□□□□ -0.97
LTBP3-202ENST00000322147 KRTAP15-1Q3LI76 137 aa8.95□□□□□ -0.98
LTBP3-202ENST00000322147 KRTAP10-10P60014 251 aa8.94□□□□□ -0.98
LTBP3-202ENST00000322147 MT1HL1P0DM35 61 aa8.9□□□□□ -0.98
LTBP3-202ENST00000322147 KRTAP10-4P60372 401 aaPredicted RBP8.9□□□□□ -0.98
LTBP3-202ENST00000322147 KRTAP12-1P59990 96 aa8.89□□□□□ -0.99
LTBP3-202ENST00000322147 RYR3Q15413 4870 aa8.88□□□□□ -0.99
LTBP3-202ENST00000322147 PKHD1P08F94 4074 aa8.85□□□□□ -0.99
LTBP3-202ENST00000322147 RYR2Q92736 4967 aa8.82□□□□□ -1
LTBP3-202ENST00000322147 RYR1P21817 5038 aa8.79□□□□□ -1
LTBP3-202ENST00000322147 FAT3Q8TDW7 4589 aa8.77□□□□□ -1.01
LTBP3-202ENST00000322147 KIAA1109Q2LD37 5005 aa8.76□□□□□ -1.01
LTBP3-202ENST00000322147 FAT2Q9NYQ8 4349 aa8.75□□□□□ -1.01
LTBP3-202ENST00000322147 DYNC1H1Q14204 4646 aaKnown RBP8.74□□□□□ -1.01
LTBP3-202ENST00000322147 PKD1P98161 4303 aa8.67□□□□□ -1.02
LTBP3-202ENST00000322147 EPPK1P58107 5090 aaKnown RBP8.63□□□□□ -1.03
LTBP3-202ENST00000322147 PP632Q6XCG6 107 aa8.59□□□□□ -1.03
LTBP3-202ENST00000322147 LRP1Q07954 4544 aaKnown RBP8.57□□□□□ -1.04
LTBP3-202ENST00000322147 APOBP04114 4563 aaKnown RBP8.48□□□□□ -1.05
LTBP3-202ENST00000322147 LORP23490 312 aaPredicted RBP8.46□□□□□ -1.05
LTBP3-202ENST00000322147 KRTAP17-1Q9BYP8 105 aa8.36□□□□□ -1.07
LTBP3-202ENST00000322147 PKHD1L1Q86WI1 4243 aa8.34□□□□□ -1.07
LTBP3-202ENST00000322147 HSPG2P98160 4391 aa8.31□□□□□ -1.08
LTBP3-202ENST00000322147 LRP2P98164 4655 aa8.26□□□□□ -1.09
LTBP3-202ENST00000322147 KRTAP4-1Q9BYQ7 146 aa8.23□□□□□ -1.09
LTBP3-202ENST00000322147 PRO2289Q9P1D8 64 aa8.19□□□□□ -1.1
LTBP3-202ENST00000322147 ABCA13Q86UQ4 5058 aa8.11□□□□□ -1.11
LTBP3-202ENST00000322147 BIRC6Q9NR09 4857 aa8.08□□□□□ -1.12
LTBP3-202ENST00000322147 HERC2O95714 4834 aa8.07□□□□□ -1.12
LTBP3-202ENST00000322147 TNXBP22105 4242 aa8.03□□□□□ -1.12
LTBP3-202ENST00000322147 LPAP08519 4548 aa7.98□□□□□ -1.13
LTBP3-202ENST00000322147 PCLOQ9Y6V0 5065 aa7.97□□□□□ -1.13
LTBP3-202ENST00000322147 HERC1Q15751 4861 aa7.87□□□□□ -1.15
LTBP3-202ENST00000322147 LCE3AQ5TA76 89 aa7.79□□□□□ -1.16
LTBP3-202ENST00000322147 KRTAP10-12P60413 245 aa7.76□□□□□ -1.17
LTBP3-202ENST00000322147 MUC2Q02817 5179 aa7.74□□□□□ -1.17
LTBP3-202ENST00000322147 CRCT1Q9UGL9 99 aa7.67□□□□□ -1.18
LTBP3-202ENST00000322147 KRTAP12-3P60328 96 aa7.65□□□□□ -1.18
LTBP3-202ENST00000322147 MT1HP80294 61 aa7.58□□□□□ -1.2
LTBP3-202ENST00000322147 FSIP2Q5CZC0 6907 aa7.58□□□□□ -1.2
LTBP3-202ENST00000322147 KRTAP23-1A1A580 65 aa7.55□□□□□ -1.2
LTBP3-202ENST00000322147 MT2AP02795 61 aa7.54□□□□□ -1.2
LTBP3-202ENST00000322147 MT1FP04733 61 aa7.51□□□□□ -1.21
LTBP3-202ENST00000322147 RNF213Q63HN8 5207 aa7.51□□□□□ -1.21
LTBP3-202ENST00000322147 UBR4Q5T4S7 5183 aa7.49□□□□□ -1.21
LTBP3-202ENST00000322147 SPRR5A0A1B0GTR4 108 aa7.47□□□□□ -1.21
LTBP3-202ENST00000322147 HMCN2Q8NDA2 5059 aa7.4□□□□□ -1.22
LTBP3-202ENST00000322147 FAT4Q6V0I7 4981 aa7.38□□□□□ -1.23
LTBP3-202ENST00000322147 KRTAP19-2Q3LHN2 52 aa7.35□□□□□ -1.23
LTBP3-202ENST00000322147 SPRR2GQ9BYE4 73 aa7.34□□□□□ -1.23
LTBP3-202ENST00000322147 MUC17Q685J3 4493 aa7.33□□□□□ -1.24
LTBP3-202ENST00000322147 OBSCNQ5VST9 7968 aa7.31□□□□□ -1.24
LTBP3-202ENST00000322147 KRTAP19-1Q8IUB9 90 aa7.29□□□□□ -1.24
LTBP3-202ENST00000322147 INE1O15225 51 aa7.26□□□□□ -1.25
LTBP3-202ENST00000322147 SYNE1Q8NF91 8797 aaKnown RBP7.17□□□□□ -1.26
LTBP3-202ENST00000322147 FLGP20930 4061 aaPredicted RBP7.12□□□□□ -1.27
LTBP3-202ENST00000322147 KRTAP10-7P60409 375 aaPredicted RBP7.09□□□□□ -1.28
LTBP3-202ENST00000322147 LCE2CQ5TA81 110 aa7.07□□□□□ -1.28
LTBP3-202ENST00000322147 KRTAP8-1Q8IUC2 63 aa7.07□□□□□ -1.28
LTBP3-202ENST00000322147 KRTAP19-5Q3LI72 72 aa7.05□□□□□ -1.28
LTBP3-202ENST00000322147 KRTAP9-8Q9BYQ0 159 aa6.99□□□□□ -1.29
LTBP3-202ENST00000322147 KRTAP10-5P60370 271 aa6.96□□□□□ -1.3
LTBP3-202ENST00000322147 KRTAP4-8A0A0G2JLE6 195 aa6.93□□□□□ -1.3
LTBP3-202ENST00000322147 KRTAP4-8Q9BYQ9 185 aa6.93□□□□□ -1.3
LTBP3-202ENST00000322147 MT1BP07438 61 aa6.92□□□□□ -1.3
LTBP3-202ENST00000322147 MT1XP80297 61 aa6.92□□□□□ -1.3
LTBP3-202ENST00000322147 KRTAP19-8Q3LI54 63 aa6.84□□□□□ -1.31
LTBP3-202ENST00000322147 LCE3CQ5T5A8 94 aa6.75□□□□□ -1.33
LTBP3-202ENST00000322147 SPRR2FQ96RM1 72 aa6.74□□□□□ -1.33
LTBP3-202ENST00000322147 USH2AO75445 5202 aa6.73□□□□□ -1.33
LTBP3-202ENST00000322147 KRTAP9-3Q9BYQ3 159 aa6.71□□□□□ -1.33
LTBP3-202ENST00000322147 DSTQ03001 7570 aaKnown RBP6.68□□□□□ -1.34
LTBP3-202ENST00000322147 KRTAP4-7Q9BYR0 210 aa6.62□□□□□ -1.35
LTBP3-202ENST00000322147 LCE2BO14633 110 aa6.62□□□□□ -1.35
LTBP3-202ENST00000322147 FCGBPQ9Y6R7 5405 aaPredicted RBP6.58□□□□□ -1.36
LTBP3-202ENST00000322147 KMT2DO14686 5537 aa6.56□□□□□ -1.36
LTBP3-202ENST00000322147 MT1GP13640 62 aa6.45□□□□□ -1.38
LTBP3-202ENST00000322147 LCE2AQ5TA79 106 aaPredicted RBP6.34□□□□□ -1.4
LTBP3-202ENST00000322147 LCE3BQ5TA77 95 aa6.33□□□□□ -1.4
LTBP3-202ENST00000322147 KRTAP9-6A8MVA2 160 aa6.23□□□□□ -1.41
LTBP3-202ENST00000322147 SYNE2Q8WXH0 6885 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms