RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 XP32Q5T750 250 aa8.24□□□□□ -1.09
PACS1-201ENST00000320580 DNAH7Q8WXX0 4024 aa8.23□□□□□ -1.09
PACS1-201ENST00000320580 KRTAP3-2Q9BYR7 98 aa8.21□□□□□ -1.1
PACS1-201ENST00000320580 ALMS1Q8TCU4 4167 aa8.2□□□□□ -1.1
PACS1-201ENST00000320580 KRTAP3-3Q9BYR6 98 aa8.13□□□□□ -1.11
PACS1-201ENST00000320580 DNAH5Q8TE73 4624 aa8.13□□□□□ -1.11
PACS1-201ENST00000320580 TNP1P09430 55 aa8.12□□□□□ -1.11
PACS1-201ENST00000320580 DNAH17Q9UFH2 4485 aa8.07□□□□□ -1.12
PACS1-201ENST00000320580 DYNC2H1Q8NCM8 4307 aaKnown RBP8.06□□□□□ -1.12
PACS1-201ENST00000320580 FAT1Q14517 4588 aa8.04□□□□□ -1.12
PACS1-201ENST00000320580 DNAH2Q9P225 4427 aa8.04□□□□□ -1.12
PACS1-201ENST00000320580 HYDINQ4G0P3 5121 aa8.02□□□□□ -1.13
PACS1-201ENST00000320580 DYNC1H1Q14204 4646 aaKnown RBP8□□□□□ -1.13
PACS1-201ENST00000320580 LRP1BQ9NZR2 4599 aa7.99□□□□□ -1.13
PACS1-201ENST00000320580 SACSQ9NZJ4 4579 aa7.95□□□□□ -1.14
PACS1-201ENST00000320580 DNAH6Q9C0G6 4158 aa7.94□□□□□ -1.14
PACS1-201ENST00000320580 KRTAP10-4P60372 401 aaPredicted RBP7.9□□□□□ -1.14
PACS1-201ENST00000320580 KMT2CQ8NEZ4 4911 aaKnown RBP7.89□□□□□ -1.15
PACS1-201ENST00000320580 KRTAP4-5Q9BYR2 181 aa7.87□□□□□ -1.15
PACS1-201ENST00000320580 KIAA1109Q2LD37 5005 aa7.86□□□□□ -1.15
PACS1-201ENST00000320580 HECTD4Q9Y4D8 3996 aa7.86□□□□□ -1.15
PACS1-201ENST00000320580 DNAH8Q96JB1 4490 aa7.85□□□□□ -1.15
PACS1-201ENST00000320580 PKHD1P08F94 4074 aa7.83□□□□□ -1.16
PACS1-201ENST00000320580 M0R2T5 61 aa7.8□□□□□ -1.16
PACS1-201ENST00000320580 FRAS1Q86XX4 4008 aa7.79□□□□□ -1.16
PACS1-201ENST00000320580 RYR2Q92736 4967 aa7.79□□□□□ -1.16
PACS1-201ENST00000320580 RYR3Q15413 4870 aa7.78□□□□□ -1.16
PACS1-201ENST00000320580 VPS13BQ7Z7G8 4022 aa7.76□□□□□ -1.17
PACS1-201ENST00000320580 FAT2Q9NYQ8 4349 aa7.73□□□□□ -1.17
PACS1-201ENST00000320580 MT1HL1P0DM35 61 aa7.73□□□□□ -1.17
PACS1-201ENST00000320580 APOBP04114 4563 aaKnown RBP7.71□□□□□ -1.18
PACS1-201ENST00000320580 RYR1P21817 5038 aa7.7□□□□□ -1.18
PACS1-201ENST00000320580 LRP1Q07954 4544 aaKnown RBP7.62□□□□□ -1.19
PACS1-201ENST00000320580 KRTAP17-1Q9BYP8 105 aa7.62□□□□□ -1.19
PACS1-201ENST00000320580 PKD1P98161 4303 aa7.6□□□□□ -1.19
PACS1-201ENST00000320580 PRO2289Q9P1D8 64 aa7.58□□□□□ -1.2
PACS1-201ENST00000320580 MYCBP2O75592 4640 aa7.55□□□□□ -1.2
PACS1-201ENST00000320580 LORP23490 312 aaPredicted RBP7.47□□□□□ -1.21
PACS1-201ENST00000320580 FAT3Q8TDW7 4589 aa7.46□□□□□ -1.21
PACS1-201ENST00000320580 EPPK1P58107 5090 aaKnown RBP7.45□□□□□ -1.22
PACS1-201ENST00000320580 INE1O15225 51 aa7.44□□□□□ -1.22
PACS1-201ENST00000320580 HSPG2P98160 4391 aa7.43□□□□□ -1.22
PACS1-201ENST00000320580 HERC2O95714 4834 aa7.34□□□□□ -1.23
PACS1-201ENST00000320580 BIRC6Q9NR09 4857 aa7.2□□□□□ -1.26
PACS1-201ENST00000320580 LRP2P98164 4655 aa7.15□□□□□ -1.26
PACS1-201ENST00000320580 KRTAP23-1A1A580 65 aa7.14□□□□□ -1.27
PACS1-201ENST00000320580 ABCA13Q86UQ4 5058 aa7.13□□□□□ -1.27
PACS1-201ENST00000320580 KRTAP10-10P60014 251 aa7.13□□□□□ -1.27
PACS1-201ENST00000320580 PKHD1L1Q86WI1 4243 aa7.06□□□□□ -1.28
PACS1-201ENST00000320580 LCE3AQ5TA76 89 aa7.04□□□□□ -1.28
PACS1-201ENST00000320580 KRTAP4-1Q9BYQ7 146 aa7.04□□□□□ -1.28
PACS1-201ENST00000320580 LPAP08519 4548 aa7.02□□□□□ -1.28
PACS1-201ENST00000320580 TNXBP22105 4242 aa6.99□□□□□ -1.29
PACS1-201ENST00000320580 HERC1Q15751 4861 aa6.87□□□□□ -1.31
PACS1-201ENST00000320580 KRTAP12-3P60328 96 aa6.85□□□□□ -1.31
PACS1-201ENST00000320580 SPRR5A0A1B0GTR4 108 aa6.82□□□□□ -1.32
PACS1-201ENST00000320580 PCLOQ9Y6V0 5065 aa6.78□□□□□ -1.32
PACS1-201ENST00000320580 KRTAP10-12P60413 245 aa6.77□□□□□ -1.33
PACS1-201ENST00000320580 MUC2Q02817 5179 aa6.66□□□□□ -1.34
PACS1-201ENST00000320580 RNF213Q63HN8 5207 aa6.62□□□□□ -1.35
PACS1-201ENST00000320580 UBR4Q5T4S7 5183 aa6.57□□□□□ -1.36
PACS1-201ENST00000320580 MT1HP80294 61 aa6.56□□□□□ -1.36
PACS1-201ENST00000320580 HMCN2Q8NDA2 5059 aa6.51□□□□□ -1.37
PACS1-201ENST00000320580 KRTAP8-1Q8IUC2 63 aa6.5□□□□□ -1.37
PACS1-201ENST00000320580 FAT4Q6V0I7 4981 aa6.43□□□□□ -1.38
PACS1-201ENST00000320580 SPRR2GQ9BYE4 73 aa6.43□□□□□ -1.38
PACS1-201ENST00000320580 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
PACS1-201ENST00000320580 MT2AP02795 61 aa6.38□□□□□ -1.39
PACS1-201ENST00000320580 MT1FP04733 61 aa6.34□□□□□ -1.39
PACS1-201ENST00000320580 KRTAP19-2Q3LHN2 52 aa6.34□□□□□ -1.39
PACS1-201ENST00000320580 MUC17Q685J3 4493 aa6.27□□□□□ -1.41
PACS1-201ENST00000320580 KRTAP19-1Q8IUB9 90 aa6.27□□□□□ -1.41
PACS1-201ENST00000320580 FLGP20930 4061 aaPredicted RBP6.25□□□□□ -1.41
PACS1-201ENST00000320580 LCE3CQ5T5A8 94 aa6.21□□□□□ -1.42
PACS1-201ENST00000320580 CRCT1Q9UGL9 99 aa6.19□□□□□ -1.42
PACS1-201ENST00000320580 KRTAP19-5Q3LI72 72 aa6.15□□□□□ -1.42
PACS1-201ENST00000320580 KRTAP9-8Q9BYQ0 159 aa6.15□□□□□ -1.42
PACS1-201ENST00000320580 KRTAP10-5P60370 271 aa6.13□□□□□ -1.43
PACS1-201ENST00000320580 FSIP2Q5CZC0 6907 aa6.11□□□□□ -1.43
PACS1-201ENST00000320580 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.43
PACS1-201ENST00000320580 MT1XP80297 61 aa6.02□□□□□ -1.45
PACS1-201ENST00000320580 KRTAP19-8Q3LI54 63 aa5.94□□□□□ -1.46
PACS1-201ENST00000320580 KRTAP9-3Q9BYQ3 159 aa5.92□□□□□ -1.46
PACS1-201ENST00000320580 MT1BP07438 61 aa5.89□□□□□ -1.47
PACS1-201ENST00000320580 LCE2AQ5TA79 106 aaPredicted RBP5.84□□□□□ -1.47
PACS1-201ENST00000320580 LCE2BO14633 110 aa5.83□□□□□ -1.48
PACS1-201ENST00000320580 KRTAP12-4P60329 112 aa5.81□□□□□ -1.48
PACS1-201ENST00000320580 USH2AO75445 5202 aa5.71□□□□□ -1.49
PACS1-201ENST00000320580 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
PACS1-201ENST00000320580 KRTAP4-8A0A0G2JLE6 195 aa5.7□□□□□ -1.5
PACS1-201ENST00000320580 KRTAP4-8Q9BYQ9 185 aa5.7□□□□□ -1.5
PACS1-201ENST00000320580 KRTAP19-4Q3LI73 84 aa5.53□□□□□ -1.52
PACS1-201ENST00000320580 SYNE1Q8NF91 8797 aaKnown RBP5.53□□□□□ -1.52
PACS1-201ENST00000320580 KRTAP2-3P0C7H8 128 aa5.51□□□□□ -1.53
PACS1-201ENST00000320580 KRTAP2-4Q9BYR9 128 aa5.51□□□□□ -1.53
PACS1-201ENST00000320580 KRTAP2-1Q9BYU5 128 aa5.51□□□□□ -1.53
PACS1-201ENST00000320580 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
PACS1-201ENST00000320580 MT1GP13640 62 aa5.48□□□□□ -1.53
PACS1-201ENST00000320580 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
PACS1-201ENST00000320580 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms