RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 SRRM2Q9UQ35 2752 aaKnown RBP6.15□□□□□ -1.43
EDEM3-201ENST00000318130 DNAH1Q9P2D7 4330 aa6.02□□□□□ -1.44
EDEM3-201ENST00000318130 CMYA5Q8N3K9 4069 aa6.02□□□□□ -1.45
EDEM3-201ENST00000318130 KRTAP10-4P60372 401 aaPredicted RBP6□□□□□ -1.45
EDEM3-201ENST00000318130 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
EDEM3-201ENST00000318130 FRAS1Q86XX4 4008 aa5.99□□□□□ -1.45
EDEM3-201ENST00000318130 DNAH10Q8IVF4 4471 aa5.98□□□□□ -1.45
EDEM3-201ENST00000318130 KRTAP12-3P60328 96 aa5.97□□□□□ -1.45
EDEM3-201ENST00000318130 KMT2AQ03164 3969 aa5.97□□□□□ -1.45
EDEM3-201ENST00000318130 LCE3AQ5TA76 89 aa5.95□□□□□ -1.46
EDEM3-201ENST00000318130 DNAH3Q8TD57 4116 aa5.93□□□□□ -1.46
EDEM3-201ENST00000318130 ANK2Q01484 3957 aa5.92□□□□□ -1.46
EDEM3-201ENST00000318130 KRTAP23-1A1A580 65 aa5.89□□□□□ -1.47
EDEM3-201ENST00000318130 LYSTQ99698 3801 aa5.84□□□□□ -1.48
EDEM3-201ENST00000318130 KRTAP10-5P60370 271 aa5.83□□□□□ -1.48
EDEM3-201ENST00000318130 KRTAP4-1Q9BYQ7 146 aa5.82□□□□□ -1.48
EDEM3-201ENST00000318130 DNAH2Q9P225 4427 aa5.8□□□□□ -1.48
EDEM3-201ENST00000318130 FAT2Q9NYQ8 4349 aa5.79□□□□□ -1.48
EDEM3-201ENST00000318130 MT1HP80294 61 aa5.79□□□□□ -1.48
EDEM3-201ENST00000318130 PLECQ15149 4684 aaKnown RBP5.78□□□□□ -1.48
EDEM3-201ENST00000318130 VPS13BQ7Z7G8 4022 aa5.76□□□□□ -1.49
EDEM3-201ENST00000318130 SPRR2FQ96RM1 72 aa5.73□□□□□ -1.49
EDEM3-201ENST00000318130 STARD9Q9P2P6 4700 aa5.71□□□□□ -1.49
EDEM3-201ENST00000318130 DNAH7Q8WXX0 4024 aa5.71□□□□□ -1.5
EDEM3-201ENST00000318130 PRKDCP78527 4128 aaKnown RBP5.71□□□□□ -1.5
EDEM3-201ENST00000318130 DNAH5Q8TE73 4624 aa5.67□□□□□ -1.5
EDEM3-201ENST00000318130 DNAH11Q96DT5 4516 aa5.65□□□□□ -1.51
EDEM3-201ENST00000318130 DNAH17Q9UFH2 4485 aa5.63□□□□□ -1.51
EDEM3-201ENST00000318130 VPS13DQ5THJ4 4388 aa5.6□□□□□ -1.51
EDEM3-201ENST00000318130 DNAH6Q9C0G6 4158 aa5.57□□□□□ -1.52
EDEM3-201ENST00000318130 LRP1BQ9NZR2 4599 aa5.57□□□□□ -1.52
EDEM3-201ENST00000318130 DYNC2H1Q8NCM8 4307 aaKnown RBP5.54□□□□□ -1.52
EDEM3-201ENST00000318130 MT2AP02795 61 aa5.53□□□□□ -1.52
EDEM3-201ENST00000318130 SPRR2EP22531 72 aa5.52□□□□□ -1.53
EDEM3-201ENST00000318130 SPRR2BP35325 72 aa5.52□□□□□ -1.53
EDEM3-201ENST00000318130 SPRR2AP35326 72 aa5.52□□□□□ -1.53
EDEM3-201ENST00000318130 MT1FP04733 61 aa5.49□□□□□ -1.53
EDEM3-201ENST00000318130 DNAH8Q96JB1 4490 aa5.47□□□□□ -1.53
EDEM3-201ENST00000318130 KRTAP17-1Q9BYP8 105 aa5.46□□□□□ -1.54
EDEM3-201ENST00000318130 KRTAP10-7P60409 375 aaPredicted RBP5.45□□□□□ -1.54
EDEM3-201ENST00000318130 KRTAP19-5Q3LI72 72 aa5.4□□□□□ -1.54
EDEM3-201ENST00000318130 SACSQ9NZJ4 4579 aa5.4□□□□□ -1.55
EDEM3-201ENST00000318130 DNHD1Q96M86 4753 aa5.37□□□□□ -1.55
EDEM3-201ENST00000318130 FAT1Q14517 4588 aa5.37□□□□□ -1.55
EDEM3-201ENST00000318130 HECTD4Q9Y4D8 3996 aa5.35□□□□□ -1.55
EDEM3-201ENST00000318130 DYNC1H1Q14204 4646 aaKnown RBP5.32□□□□□ -1.56
EDEM3-201ENST00000318130 LPAP08519 4548 aa5.3□□□□□ -1.56
EDEM3-201ENST00000318130 SPRR2DP22532 72 aa5.3□□□□□ -1.56
EDEM3-201ENST00000318130 SPRR2GQ9BYE4 73 aa5.28□□□□□ -1.56
EDEM3-201ENST00000318130 LCE3CQ5T5A8 94 aa5.22□□□□□ -1.57
EDEM3-201ENST00000318130 HSPG2P98160 4391 aa5.22□□□□□ -1.57
EDEM3-201ENST00000318130 LCE3BQ5TA77 95 aa5.16□□□□□ -1.58
EDEM3-201ENST00000318130 RYR1P21817 5038 aa5.12□□□□□ -1.59
EDEM3-201ENST00000318130 LCE2BO14633 110 aa5.11□□□□□ -1.59
EDEM3-201ENST00000318130 APOBP04114 4563 aaKnown RBP5.09□□□□□ -1.59
EDEM3-201ENST00000318130 MT1GP13640 62 aa5.09□□□□□ -1.6
EDEM3-201ENST00000318130 KRTAP19-1Q8IUB9 90 aa5.09□□□□□ -1.6
EDEM3-201ENST00000318130 FAT3Q8TDW7 4589 aa5.08□□□□□ -1.6
EDEM3-201ENST00000318130 PKHD1P08F94 4074 aa5.07□□□□□ -1.6
EDEM3-201ENST00000318130 PKHD1L1Q86WI1 4243 aa5.06□□□□□ -1.6
EDEM3-201ENST00000318130 KRTAP4-8A0A0G2JLE6 195 aa5.04□□□□□ -1.6
EDEM3-201ENST00000318130 KRTAP4-8Q9BYQ9 185 aa5.04□□□□□ -1.6
EDEM3-201ENST00000318130 PKD1P98161 4303 aa5.03□□□□□ -1.6
EDEM3-201ENST00000318130 LRP1Q07954 4544 aaKnown RBP5□□□□□ -1.61
EDEM3-201ENST00000318130 TNXBP22105 4242 aa4.95□□□□□ -1.62
EDEM3-201ENST00000318130 RYR3Q15413 4870 aa4.94□□□□□ -1.62
EDEM3-201ENST00000318130 HYDINQ4G0P3 5121 aa4.93□□□□□ -1.62
EDEM3-201ENST00000318130 MT4P47944 62 aa4.93□□□□□ -1.62
EDEM3-201ENST00000318130 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
EDEM3-201ENST00000318130 KRTAP9-2Q9BYQ4 174 aa4.88□□□□□ -1.63
EDEM3-201ENST00000318130 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
EDEM3-201ENST00000318130 MYCBP2O75592 4640 aa4.86□□□□□ -1.63
EDEM3-201ENST00000318130 MT1XP80297 61 aa4.85□□□□□ -1.63
EDEM3-201ENST00000318130 KRTAP19-8Q3LI54 63 aa4.84□□□□□ -1.63
EDEM3-201ENST00000318130 LCE2CQ5TA81 110 aa4.84□□□□□ -1.63
EDEM3-201ENST00000318130 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
EDEM3-201ENST00000318130 KRTAP9-8Q9BYQ0 159 aa4.83□□□□□ -1.64
EDEM3-201ENST00000318130 LCE2DQ5TA82 110 aaPredicted RBP4.82□□□□□ -1.64
EDEM3-201ENST00000318130 MT1BP07438 61 aa4.77□□□□□ -1.65
EDEM3-201ENST00000318130 KRTAP4-7Q9BYR0 210 aa4.74□□□□□ -1.65
EDEM3-201ENST00000318130 KRTAP9-3Q9BYQ3 159 aa4.72□□□□□ -1.65
EDEM3-201ENST00000318130 KRTAP9-6A0A140TA67 174 aa4.64□□□□□ -1.67
EDEM3-201ENST00000318130 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
EDEM3-201ENST00000318130 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
EDEM3-201ENST00000318130 MUC17Q685J3 4493 aa4.57□□□□□ -1.68
EDEM3-201ENST00000318130 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
EDEM3-201ENST00000318130 FLGP20930 4061 aaPredicted RBP4.55□□□□□ -1.68
EDEM3-201ENST00000318130 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
EDEM3-201ENST00000318130 LRP2P98164 4655 aa4.54□□□□□ -1.68
EDEM3-201ENST00000318130 KIAA1109Q2LD37 5005 aa4.54□□□□□ -1.68
EDEM3-201ENST00000318130 RYR2Q92736 4967 aa4.53□□□□□ -1.69
EDEM3-201ENST00000318130 LCE1BQ5T7P3 118 aa4.51□□□□□ -1.69
EDEM3-201ENST00000318130 HERC1Q15751 4861 aa4.5□□□□□ -1.69
EDEM3-201ENST00000318130 KRTAP19-3Q7Z4W3 81 aa4.49□□□□□ -1.69
EDEM3-201ENST00000318130 LCE1DQ5T752 114 aa4.45□□□□□ -1.7
EDEM3-201ENST00000318130 KRTAP19-6Q3LI70 58 aa4.42□□□□□ -1.7
EDEM3-201ENST00000318130 KRTAP20-1Q3LI63 56 aa4.42□□□□□ -1.7
EDEM3-201ENST00000318130 MT1LQ93083 61 aa4.4□□□□□ -1.7
EDEM3-201ENST00000318130 HERC2O95714 4834 aa4.39□□□□□ -1.71
EDEM3-201ENST00000318130 BIRC6Q9NR09 4857 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms