RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 MMP24-AS1A0A0U1RRL7 71 aa2.16□□□□□ -2.06
GEN1-201ENST00000317402 KRTAP21-3Q3LHN1 58 aa2.16□□□□□ -2.06
GEN1-201ENST00000317402 M0QZ58 72 aa2.15□□□□□ -2.06
GEN1-201ENST00000317402 R4GN34 69 aa2.15□□□□□ -2.06
GEN1-201ENST00000317402 KRTAP10-2P60368 255 aa2.15□□□□□ -2.07
GEN1-201ENST00000317402 RYR2Q92736 4967 aa2.14□□□□□ -2.07
GEN1-201ENST00000317402 HSPG2P98160 4391 aa2.14□□□□□ -2.07
GEN1-201ENST00000317402 LCE6AA0A183 80 aa2.14□□□□□ -2.07
GEN1-201ENST00000317402 H1FX-AS1Q4G0G2 97 aa2.14□□□□□ -2.07
GEN1-201ENST00000317402 PLAC8Q9NZF1 115 aa2.14□□□□□ -2.07
GEN1-201ENST00000317402 RPL37P61927 97 aaKnown RBP2.13□□□□□ -2.07
GEN1-201ENST00000317402 M0R2T5 61 aa2.12□□□□□ -2.07
GEN1-201ENST00000317402 VPS13BQ7Z7G8 4022 aa2.12□□□□□ -2.07
GEN1-201ENST00000317402 Q5W150 140 aa2.11□□□□□ -2.07
GEN1-201ENST00000317402 MUC2Q02817 5179 aa2.11□□□□□ -2.07
GEN1-201ENST00000317402 INE1O15225 51 aa2.1□□□□□ -2.07
GEN1-201ENST00000317402 LINC00472Q9H8W2 130 aa2.1□□□□□ -2.07
GEN1-201ENST00000317402 FAT4Q6V0I7 4981 aa2.1□□□□□ -2.07
GEN1-201ENST00000317402 KRTAP4-16G5E9R7 235 aaPredicted RBP2.1□□□□□ -2.07
GEN1-201ENST00000317402 C9orf92A6NGG3 77 aa2.1□□□□□ -2.07
GEN1-201ENST00000317402 KRTAP29-1A8MX34 341 aaPredicted RBP2.09□□□□□ -2.08
GEN1-201ENST00000317402 HMCN2Q8NDA2 5059 aa2.08□□□□□ -2.08
GEN1-201ENST00000317402 PCLOQ9Y6V0 5065 aa2.06□□□□□ -2.08
GEN1-201ENST00000317402 KIAA1109Q2LD37 5005 aa2.06□□□□□ -2.08
GEN1-201ENST00000317402 KRTAP10-1P60331 282 aa2.06□□□□□ -2.08
GEN1-201ENST00000317402 TNP1P09430 55 aa2.05□□□□□ -2.08
GEN1-201ENST00000317402 C10orf95Q9H7T3 257 aa2.04□□□□□ -2.08
GEN1-201ENST00000317402 LRP2P98164 4655 aa2.04□□□□□ -2.08
GEN1-201ENST00000317402 FLGP20930 4061 aaPredicted RBP2.03□□□□□ -2.08
GEN1-201ENST00000317402 P0C880 135 aa2.03□□□□□ -2.08
GEN1-201ENST00000317402 KRTAP13-1Q8IUC0 172 aa2.02□□□□□ -2.09
GEN1-201ENST00000317402 PRO2289Q9P1D8 64 aa2.02□□□□□ -2.09
GEN1-201ENST00000317402 KRTAP4-5Q9BYR2 181 aa2.01□□□□□ -2.09
GEN1-201ENST00000317402 Q5VSD8 79 aa2□□□□□ -2.09
GEN1-201ENST00000317402 TNXBP22105 4242 aa2□□□□□ -2.09
GEN1-201ENST00000317402 Q6ZRN7 208 aaPredicted RBP2□□□□□ -2.09
GEN1-201ENST00000317402 H0YAA0 97 aa1.98□□□□□ -2.09
GEN1-201ENST00000317402 KRTAP13-2Q52LG2 175 aa1.98□□□□□ -2.09
GEN1-201ENST00000317402 HERC1Q15751 4861 aa1.98□□□□□ -2.09
GEN1-201ENST00000317402 KRTAP10-8P60410 259 aa1.96□□□□□ -2.1
GEN1-201ENST00000317402 UBR4Q5T4S7 5183 aa1.96□□□□□ -2.1
GEN1-201ENST00000317402 MUC17Q685J3 4493 aa1.95□□□□□ -2.1
GEN1-201ENST00000317402 RNF213Q63HN8 5207 aa1.93□□□□□ -2.1
GEN1-201ENST00000317402 KRTAP3-1Q9BYR8 98 aa1.93□□□□□ -2.1
GEN1-201ENST00000317402 TPRXLQ17RH7 258 aa1.93□□□□□ -2.1
GEN1-201ENST00000317402 LORP23490 312 aaPredicted RBP1.91□□□□□ -2.1
GEN1-201ENST00000317402 KRTAP15-1Q3LI76 137 aa1.91□□□□□ -2.1
GEN1-201ENST00000317402 KRTAP13-4Q3LI77 160 aa1.91□□□□□ -2.1
GEN1-201ENST00000317402 A0A1B0GVY2 172 aa1.9□□□□□ -2.11
GEN1-201ENST00000317402 USH2AO75445 5202 aa1.88□□□□□ -2.11
GEN1-201ENST00000317402 KRTAP1-4P0C5Y4 121 aa1.88□□□□□ -2.11
GEN1-201ENST00000317402 HERC2O95714 4834 aa1.88□□□□□ -2.11
GEN1-201ENST00000317402 KRTAP13-3Q3SY46 172 aa1.87□□□□□ -2.11
GEN1-201ENST00000317402 KMT2DO14686 5537 aa1.84□□□□□ -2.12
GEN1-201ENST00000317402 KRTAP4-1Q9BYQ7 146 aa1.83□□□□□ -2.12
GEN1-201ENST00000317402 BIRC6Q9NR09 4857 aa1.83□□□□□ -2.12
GEN1-201ENST00000317402 KRTAP12-2P59991 146 aa1.79□□□□□ -2.12
GEN1-201ENST00000317402 KRTAP3-3Q9BYR6 98 aa1.79□□□□□ -2.12
GEN1-201ENST00000317402 XP32Q5T750 250 aa1.79□□□□□ -2.12
GEN1-201ENST00000317402 KRTAP10-4P60372 401 aaPredicted RBP1.78□□□□□ -2.12
GEN1-201ENST00000317402 KRTAP3-2Q9BYR7 98 aa1.77□□□□□ -2.13
GEN1-201ENST00000317402 FSIP2Q5CZC0 6907 aa1.74□□□□□ -2.13
GEN1-201ENST00000317402 KRTAP10-6P60371 365 aaPredicted RBP1.74□□□□□ -2.13
GEN1-201ENST00000317402 KRTAP12-1P59990 96 aa1.73□□□□□ -2.13
GEN1-201ENST00000317402 MT1HL1P0DM35 61 aa1.72□□□□□ -2.13
GEN1-201ENST00000317402 KRTAP10-10P60014 251 aa1.71□□□□□ -2.13
GEN1-201ENST00000317402 LCE2DQ5TA82 110 aaPredicted RBP1.64□□□□□ -2.15
GEN1-201ENST00000317402 SSPOA2VEC9 5147 aa1.63□□□□□ -2.15
GEN1-201ENST00000317402 KRTAP4-7Q9BYR0 210 aa1.6□□□□□ -2.15
GEN1-201ENST00000317402 KRTAP10-12P60413 245 aa1.6□□□□□ -2.15
GEN1-201ENST00000317402 KRTAP19-2Q3LHN2 52 aa1.59□□□□□ -2.15
GEN1-201ENST00000317402 OBSCNQ5VST9 7968 aa1.57□□□□□ -2.16
GEN1-201ENST00000317402 KRTAP4-8A0A0G2JLE6 195 aa1.55□□□□□ -2.16
GEN1-201ENST00000317402 KRTAP4-8Q9BYQ9 185 aa1.55□□□□□ -2.16
GEN1-201ENST00000317402 FCGBPQ9Y6R7 5405 aaPredicted RBP1.54□□□□□ -2.16
GEN1-201ENST00000317402 LCE2CQ5TA81 110 aa1.53□□□□□ -2.16
GEN1-201ENST00000317402 LCE2BO14633 110 aa1.51□□□□□ -2.17
GEN1-201ENST00000317402 MT1FP04733 61 aa1.51□□□□□ -2.17
GEN1-201ENST00000317402 LCE3AQ5TA76 89 aa1.51□□□□□ -2.17
GEN1-201ENST00000317402 KRTAP12-3P60328 96 aa1.51□□□□□ -2.17
GEN1-201ENST00000317402 MT1HP80294 61 aa1.51□□□□□ -2.17
GEN1-201ENST00000317402 CRCT1Q9UGL9 99 aa1.5□□□□□ -2.17
GEN1-201ENST00000317402 KRTAP4-3Q9BYR4 195 aa1.5□□□□□ -2.17
GEN1-201ENST00000317402 KRTAP10-7P60409 375 aaPredicted RBP1.5□□□□□ -2.17
GEN1-201ENST00000317402 DSTQ03001 7570 aaKnown RBP1.49□□□□□ -2.17
GEN1-201ENST00000317402 SYNE2Q8WXH0 6885 aaKnown RBP1.49□□□□□ -2.17
GEN1-201ENST00000317402 MUC12Q9UKN1 5478 aa1.48□□□□□ -2.17
GEN1-201ENST00000317402 LOC100996750A0A140TA64 210 aa1.48□□□□□ -2.17
GEN1-201ENST00000317402 MACF1Q9UPN3 7388 aaKnown RBP1.48□□□□□ -2.17
GEN1-201ENST00000317402 SPRR2GQ9BYE4 73 aa1.47□□□□□ -2.17
GEN1-201ENST00000317402 KRTAP9-8Q9BYQ0 159 aa1.46□□□□□ -2.18
GEN1-201ENST00000317402 LCE2AQ5TA79 106 aaPredicted RBP1.44□□□□□ -2.18
GEN1-201ENST00000317402 MT2AP02795 61 aa1.44□□□□□ -2.18
GEN1-201ENST00000317402 SPRR5A0A1B0GTR4 108 aa1.43□□□□□ -2.18
GEN1-201ENST00000317402 KRTAP10-5P60370 271 aa1.43□□□□□ -2.18
GEN1-201ENST00000317402 KRTAP19-1Q8IUB9 90 aa1.43□□□□□ -2.18
GEN1-201ENST00000317402 KRTAP4-9Q9BYQ8 210 aa1.42□□□□□ -2.18
GEN1-201ENST00000317402 KRTAP9-6A8MVA2 160 aa1.41□□□□□ -2.18
GEN1-201ENST00000317402 KRTAP19-8Q3LI54 63 aa1.41□□□□□ -2.18
GEN1-201ENST00000317402 KRTAP8-1Q8IUC2 63 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms