RNA–Protein interactions for RNA: ENST00000317296.9

STAG3-201, Transcript of stromal antigen 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene STAG3, Length 4,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3-201ENST00000317296 DNAH11Q96DT5 4516 aa5.05□□□□□ -1.6
STAG3-201ENST00000317296 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
STAG3-201ENST00000317296 KRTAP12-2P59991 146 aa5.04□□□□□ -1.6
STAG3-201ENST00000317296 KRTAP13-4Q3LI77 160 aa5.04□□□□□ -1.6
STAG3-201ENST00000317296 FRAS1Q86XX4 4008 aa5.04□□□□□ -1.6
STAG3-201ENST00000317296 DNAH8Q96JB1 4490 aa5.03□□□□□ -1.6
STAG3-201ENST00000317296 KRTAP10-4P60372 401 aaPredicted RBP5.02□□□□□ -1.61
STAG3-201ENST00000317296 DNAH2Q9P225 4427 aa5.02□□□□□ -1.61
STAG3-201ENST00000317296 TNP1P09430 55 aa5.01□□□□□ -1.61
STAG3-201ENST00000317296 DYNC2H1Q8NCM8 4307 aaKnown RBP5.01□□□□□ -1.61
STAG3-201ENST00000317296 DNAH17Q9UFH2 4485 aa5.01□□□□□ -1.61
STAG3-201ENST00000317296 KIAA1109Q2LD37 5005 aa5□□□□□ -1.61
STAG3-201ENST00000317296 KRTAP10-6P60371 365 aaPredicted RBP5□□□□□ -1.61
STAG3-201ENST00000317296 PRO2289Q9P1D8 64 aa4.99□□□□□ -1.61
STAG3-201ENST00000317296 HECTD4Q9Y4D8 3996 aa4.98□□□□□ -1.61
STAG3-201ENST00000317296 DNAH6Q9C0G6 4158 aa4.96□□□□□ -1.61
STAG3-201ENST00000317296 KMT2CQ8NEZ4 4911 aaKnown RBP4.95□□□□□ -1.62
STAG3-201ENST00000317296 KRTAP12-1P59990 96 aa4.95□□□□□ -1.62
STAG3-201ENST00000317296 LRP1BQ9NZR2 4599 aa4.94□□□□□ -1.62
STAG3-201ENST00000317296 RYR3Q15413 4870 aa4.93□□□□□ -1.62
STAG3-201ENST00000317296 DNAH5Q8TE73 4624 aa4.93□□□□□ -1.62
STAG3-201ENST00000317296 HYDINQ4G0P3 5121 aa4.9□□□□□ -1.62
STAG3-201ENST00000317296 RYR1P21817 5038 aa4.87□□□□□ -1.63
STAG3-201ENST00000317296 RYR2Q92736 4967 aa4.87□□□□□ -1.63
STAG3-201ENST00000317296 KRTAP3-2Q9BYR7 98 aa4.86□□□□□ -1.63
STAG3-201ENST00000317296 PP632Q6XCG6 107 aa4.85□□□□□ -1.63
STAG3-201ENST00000317296 BIRC6Q9NR09 4857 aa4.85□□□□□ -1.63
STAG3-201ENST00000317296 SACSQ9NZJ4 4579 aa4.84□□□□□ -1.63
STAG3-201ENST00000317296 DYNC1H1Q14204 4646 aaKnown RBP4.84□□□□□ -1.64
STAG3-201ENST00000317296 KRTAP3-3Q9BYR6 98 aa4.83□□□□□ -1.64
STAG3-201ENST00000317296 FAT1Q14517 4588 aa4.83□□□□□ -1.64
STAG3-201ENST00000317296 VPS13BQ7Z7G8 4022 aa4.83□□□□□ -1.64
STAG3-201ENST00000317296 PKHD1P08F94 4074 aa4.79□□□□□ -1.64
STAG3-201ENST00000317296 KRTAP17-1Q9BYP8 105 aa4.78□□□□□ -1.64
STAG3-201ENST00000317296 EPPK1P58107 5090 aaKnown RBP4.76□□□□□ -1.65
STAG3-201ENST00000317296 FAT2Q9NYQ8 4349 aa4.75□□□□□ -1.65
STAG3-201ENST00000317296 HERC2O95714 4834 aa4.74□□□□□ -1.65
STAG3-201ENST00000317296 PKD1P98161 4303 aa4.71□□□□□ -1.66
STAG3-201ENST00000317296 APOBP04114 4563 aaKnown RBP4.64□□□□□ -1.67
STAG3-201ENST00000317296 MYCBP2O75592 4640 aa4.62□□□□□ -1.67
STAG3-201ENST00000317296 LRP1Q07954 4544 aaKnown RBP4.61□□□□□ -1.67
STAG3-201ENST00000317296 ABCA13Q86UQ4 5058 aa4.53□□□□□ -1.68
STAG3-201ENST00000317296 KRTAP4-1Q9BYQ7 146 aa4.52□□□□□ -1.69
STAG3-201ENST00000317296 FAT3Q8TDW7 4589 aa4.5□□□□□ -1.69
STAG3-201ENST00000317296 HSPG2P98160 4391 aa4.49□□□□□ -1.69
STAG3-201ENST00000317296 PCLOQ9Y6V0 5065 aa4.46□□□□□ -1.7
STAG3-201ENST00000317296 MT1HP80294 61 aa4.44□□□□□ -1.7
STAG3-201ENST00000317296 PKHD1L1Q86WI1 4243 aa4.43□□□□□ -1.7
STAG3-201ENST00000317296 LORP23490 312 aaPredicted RBP4.42□□□□□ -1.7
STAG3-201ENST00000317296 LRP2P98164 4655 aa4.39□□□□□ -1.71
STAG3-201ENST00000317296 HERC1Q15751 4861 aa4.37□□□□□ -1.71
STAG3-201ENST00000317296 INE1O15225 51 aa4.35□□□□□ -1.71
STAG3-201ENST00000317296 TNXBP22105 4242 aa4.35□□□□□ -1.71
STAG3-201ENST00000317296 KRTAP10-12P60413 245 aa4.35□□□□□ -1.71
STAG3-201ENST00000317296 MT2AP02795 61 aa4.33□□□□□ -1.72
STAG3-201ENST00000317296 KRTAP8-1Q8IUC2 63 aa4.26□□□□□ -1.73
STAG3-201ENST00000317296 LPAP08519 4548 aa4.26□□□□□ -1.73
STAG3-201ENST00000317296 CRCT1Q9UGL9 99 aa4.25□□□□□ -1.73
STAG3-201ENST00000317296 MT1FP04733 61 aa4.24□□□□□ -1.73
STAG3-201ENST00000317296 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
STAG3-201ENST00000317296 UBR4Q5T4S7 5183 aa4.23□□□□□ -1.73
STAG3-201ENST00000317296 RNF213Q63HN8 5207 aa4.19□□□□□ -1.74
STAG3-201ENST00000317296 KRTAP12-3P60328 96 aa4.16□□□□□ -1.74
STAG3-201ENST00000317296 LCE3AQ5TA76 89 aa4.15□□□□□ -1.75
STAG3-201ENST00000317296 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
STAG3-201ENST00000317296 SPRR2GQ9BYE4 73 aa4.12□□□□□ -1.75
STAG3-201ENST00000317296 HMCN2Q8NDA2 5059 aa4.1□□□□□ -1.75
STAG3-201ENST00000317296 SPRR2FQ96RM1 72 aa4.09□□□□□ -1.75
STAG3-201ENST00000317296 SPRR5A0A1B0GTR4 108 aa4.05□□□□□ -1.76
STAG3-201ENST00000317296 MUC2Q02817 5179 aa4.04□□□□□ -1.76
STAG3-201ENST00000317296 LCE2CQ5TA81 110 aa3.99□□□□□ -1.77
STAG3-201ENST00000317296 KRTAP19-2Q3LHN2 52 aa3.98□□□□□ -1.77
STAG3-201ENST00000317296 KRTAP9-8Q9BYQ0 159 aa3.98□□□□□ -1.77
STAG3-201ENST00000317296 KRTAP19-1Q8IUB9 90 aa3.97□□□□□ -1.77
STAG3-201ENST00000317296 KRTAP9-2Q9BYQ4 174 aa3.96□□□□□ -1.78
STAG3-201ENST00000317296 FAT4Q6V0I7 4981 aa3.96□□□□□ -1.78
STAG3-201ENST00000317296 MUC17Q685J3 4493 aa3.93□□□□□ -1.78
STAG3-201ENST00000317296 KRTAP19-8Q3LI54 63 aa3.9□□□□□ -1.78
STAG3-201ENST00000317296 LCE2AQ5TA79 106 aaPredicted RBP3.88□□□□□ -1.79
STAG3-201ENST00000317296 KRTAP9-3Q9BYQ3 159 aa3.87□□□□□ -1.79
STAG3-201ENST00000317296 KRTAP10-5P60370 271 aa3.85□□□□□ -1.79
STAG3-201ENST00000317296 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
STAG3-201ENST00000317296 KRTAP10-7P60409 375 aaPredicted RBP3.85□□□□□ -1.79
STAG3-201ENST00000317296 SPRR2EP22531 72 aa3.84□□□□□ -1.79
STAG3-201ENST00000317296 SPRR2BP35325 72 aa3.84□□□□□ -1.79
STAG3-201ENST00000317296 SPRR2AP35326 72 aa3.84□□□□□ -1.79
STAG3-201ENST00000317296 MT1BP07438 61 aa3.84□□□□□ -1.8
STAG3-201ENST00000317296 FLGP20930 4061 aaPredicted RBP3.83□□□□□ -1.8
STAG3-201ENST00000317296 KRTAP19-5Q3LI72 72 aa3.82□□□□□ -1.8
STAG3-201ENST00000317296 KRTAP9-6A0A140TA67 174 aa3.8□□□□□ -1.8
STAG3-201ENST00000317296 LCE2BO14633 110 aa3.78□□□□□ -1.8
STAG3-201ENST00000317296 MT1XP80297 61 aa3.76□□□□□ -1.81
STAG3-201ENST00000317296 KRTAP4-8A0A0G2JLE6 195 aa3.73□□□□□ -1.81
STAG3-201ENST00000317296 KRTAP4-8Q9BYQ9 185 aa3.73□□□□□ -1.81
STAG3-201ENST00000317296 SPRR2DP22532 72 aa3.71□□□□□ -1.81
STAG3-201ENST00000317296 LCE2DQ5TA82 110 aaPredicted RBP3.69□□□□□ -1.82
STAG3-201ENST00000317296 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
STAG3-201ENST00000317296 KRTAP19-6Q3LI70 58 aa3.6□□□□□ -1.83
STAG3-201ENST00000317296 MT1GP13640 62 aa3.57□□□□□ -1.84
STAG3-201ENST00000317296 KRTAP19-4Q3LI73 84 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms