RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 COX6B2Q6YFQ2 88 aa3.69□□□□□ -1.82
NPHP1-201ENST00000316534 LRP2P98164 4655 aa3.69□□□□□ -1.82
NPHP1-201ENST00000316534 PCLOQ9Y6V0 5065 aa3.68□□□□□ -1.82
NPHP1-201ENST00000316534 BRK1Q8WUW1 75 aa3.67□□□□□ -1.82
NPHP1-201ENST00000316534 SPATA8Q6RVD6 105 aa3.67□□□□□ -1.82
NPHP1-201ENST00000316534 HMCN2Q8NDA2 5059 aa3.67□□□□□ -1.82
NPHP1-201ENST00000316534 KRTAP19-2Q3LHN2 52 aa3.66□□□□□ -1.82
NPHP1-201ENST00000316534 PSPHP1O15172 72 aa3.64□□□□□ -1.83
NPHP1-201ENST00000316534 KTN1-AS1Q86SY8 53 aa3.64□□□□□ -1.83
NPHP1-201ENST00000316534 H3BS24 57 aa3.63□□□□□ -1.83
NPHP1-201ENST00000316534 PMAIP1Q13794 54 aa3.63□□□□□ -1.83
NPHP1-201ENST00000316534 PRR15LQ9BU68 103 aa3.6□□□□□ -1.83
NPHP1-201ENST00000316534 FLGP20930 4061 aaPredicted RBP3.6□□□□□ -1.83
NPHP1-201ENST00000316534 HERC1Q15751 4861 aa3.59□□□□□ -1.83
NPHP1-201ENST00000316534 KRTAP4-1Q9BYQ7 146 aa3.59□□□□□ -1.83
NPHP1-201ENST00000316534 SPTSSBQ8NFR3 76 aa3.58□□□□□ -1.84
NPHP1-201ENST00000316534 CHKB-CPT1BH3BT56 60 aa3.57□□□□□ -1.84
NPHP1-201ENST00000316534 SEC61BP60468 96 aaKnown RBP3.57□□□□□ -1.84
NPHP1-201ENST00000316534 H1FX-AS1Q4G0G2 97 aa3.57□□□□□ -1.84
NPHP1-201ENST00000316534 H0YAA0 97 aa3.54□□□□□ -1.84
NPHP1-201ENST00000316534 KRTAP10-6P60371 365 aaPredicted RBP3.53□□□□□ -1.84
NPHP1-201ENST00000316534 S4R3F8 94 aa3.53□□□□□ -1.84
NPHP1-201ENST00000316534 A0A1B0GU69 56 aa3.52□□□□□ -1.85
NPHP1-201ENST00000316534 SEC61GP60059 68 aa3.52□□□□□ -1.85
NPHP1-201ENST00000316534 RBM12B-AS1Q9P1G2 102 aa3.51□□□□□ -1.85
NPHP1-201ENST00000316534 LCE2AQ5TA79 106 aaPredicted RBP3.48□□□□□ -1.85
NPHP1-201ENST00000316534 DMBT1Q9UGM3 2413 aaPredicted RBP3.48□□□□□ -1.85
NPHP1-201ENST00000316534 A6NED7 52 aa3.47□□□□□ -1.85
NPHP1-201ENST00000316534 UQCR11O14957 56 aa3.46□□□□□ -1.86
NPHP1-201ENST00000316534 MIR22HGQ0VDD5 57 aa3.42□□□□□ -1.86
NPHP1-201ENST00000316534 LORP23490 312 aaPredicted RBP3.42□□□□□ -1.86
NPHP1-201ENST00000316534 A0A1B0GU33 70 aa3.42□□□□□ -1.86
NPHP1-201ENST00000316534 RNF213Q63HN8 5207 aa3.41□□□□□ -1.86
NPHP1-201ENST00000316534 CSAG1Q6PB30 78 aa3.4□□□□□ -1.86
NPHP1-201ENST00000316534 KRTAP13-4Q3LI77 160 aa3.4□□□□□ -1.86
NPHP1-201ENST00000316534 ADM2Q7Z4H4 148 aa3.39□□□□□ -1.87
NPHP1-201ENST00000316534 P0C880 135 aa3.38□□□□□ -1.87
NPHP1-201ENST00000316534 MUC2Q02817 5179 aa3.36□□□□□ -1.87
NPHP1-201ENST00000316534 M0QZ58 72 aa3.35□□□□□ -1.87
NPHP1-201ENST00000316534 MT1HP80294 61 aa3.32□□□□□ -1.88
NPHP1-201ENST00000316534 UBR4Q5T4S7 5183 aa3.32□□□□□ -1.88
NPHP1-201ENST00000316534 CRIPTQ9P021 101 aa3.31□□□□□ -1.88
NPHP1-201ENST00000316534 PRAC1Q96KF2 57 aa3.3□□□□□ -1.88
NPHP1-201ENST00000316534 KRTAP25-1Q3LHN0 102 aa3.29□□□□□ -1.88
NPHP1-201ENST00000316534 LINC01554Q52M75 96 aa3.29□□□□□ -1.88
NPHP1-201ENST00000316534 KRTAP12-1P59990 96 aa3.28□□□□□ -1.88
NPHP1-201ENST00000316534 FAT4Q6V0I7 4981 aa3.28□□□□□ -1.88
NPHP1-201ENST00000316534 KRTAP9-8Q9BYQ0 159 aa3.26□□□□□ -1.89
NPHP1-201ENST00000316534 KRTAP12-2P59991 146 aa3.25□□□□□ -1.89
NPHP1-201ENST00000316534 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
NPHP1-201ENST00000316534 MT2AP02795 61 aa3.21□□□□□ -1.9
NPHP1-201ENST00000316534 ROMO1P60602 79 aa3.2□□□□□ -1.9
NPHP1-201ENST00000316534 KRTAP19-1Q8IUB9 90 aa3.2□□□□□ -1.9
NPHP1-201ENST00000316534 MT1FP04733 61 aa3.18□□□□□ -1.9
NPHP1-201ENST00000316534 KRTAP19-8Q3LI54 63 aa3.17□□□□□ -1.9
NPHP1-201ENST00000316534 KRTAP15-1Q3LI76 137 aa3.17□□□□□ -1.9
NPHP1-201ENST00000316534 R4GN34 69 aa3.17□□□□□ -1.9
NPHP1-201ENST00000316534 K7ERS5 55 aa3.16□□□□□ -1.9
NPHP1-201ENST00000316534 KRTAP9-3Q9BYQ3 159 aa3.14□□□□□ -1.91
NPHP1-201ENST00000316534 A0A0D9SG42 100 aa3.13□□□□□ -1.91
NPHP1-201ENST00000316534 C10orf95Q9H7T3 257 aa3.1□□□□□ -1.91
NPHP1-201ENST00000316534 MT1BP07438 61 aa3.08□□□□□ -1.92
NPHP1-201ENST00000316534 KRTAP23-1A1A580 65 aa3.06□□□□□ -1.92
NPHP1-201ENST00000316534 SPINT4Q6UDR6 99 aa3.06□□□□□ -1.92
NPHP1-201ENST00000316534 M0R2T5 61 aa3.03□□□□□ -1.92
NPHP1-201ENST00000316534 KRTAP10-10P60014 251 aa3.03□□□□□ -1.92
NPHP1-201ENST00000316534 SPRR5A0A1B0GTR4 108 aa3.02□□□□□ -1.93
NPHP1-201ENST00000316534 KRTAP10-5P60370 271 aa3□□□□□ -1.93
NPHP1-201ENST00000316534 MT1XP80297 61 aa2.99□□□□□ -1.93
NPHP1-201ENST00000316534 PLAC4Q8WY50 150 aa2.96□□□□□ -1.94
NPHP1-201ENST00000316534 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
NPHP1-201ENST00000316534 LCE3BQ5TA77 95 aa2.94□□□□□ -1.94
NPHP1-201ENST00000316534 CAMK2N1Q7Z7J9 78 aa2.92□□□□□ -1.94
NPHP1-201ENST00000316534 LOC100996750A0A140TA64 210 aa2.9□□□□□ -1.95
NPHP1-201ENST00000316534 LCE4AQ5TA78 99 aa2.9□□□□□ -1.95
NPHP1-201ENST00000316534 KRTAP4-6Q9BYQ5 205 aa2.9□□□□□ -1.95
NPHP1-201ENST00000316534 TNP1P09430 55 aa2.89□□□□□ -1.95
NPHP1-201ENST00000316534 USH2AO75445 5202 aa2.89□□□□□ -1.95
NPHP1-201ENST00000316534 KRTAP10-12P60413 245 aa2.89□□□□□ -1.95
NPHP1-201ENST00000316534 SSPOA2VEC9 5147 aa2.88□□□□□ -1.95
NPHP1-201ENST00000316534 KRTAP8-1Q8IUC2 63 aa2.85□□□□□ -1.95
NPHP1-201ENST00000316534 KRTAP9-6A0A140TA67 174 aa2.85□□□□□ -1.95
NPHP1-201ENST00000316534 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.85□□□□□ -1.95
NPHP1-201ENST00000316534 KRTAP19-6Q3LI70 58 aa2.85□□□□□ -1.95
NPHP1-201ENST00000316534 PRO2289Q9P1D8 64 aa2.83□□□□□ -1.96
NPHP1-201ENST00000316534 KRTAP9-2Q9BYQ4 174 aa2.83□□□□□ -1.96
NPHP1-201ENST00000316534 KRTAP10-7P60409 375 aaPredicted RBP2.82□□□□□ -1.96
NPHP1-201ENST00000316534 LCE3AQ5TA76 89 aa2.8□□□□□ -1.96
NPHP1-201ENST00000316534 KRTAP4-8Q9BYQ9 185 aa2.73□□□□□ -1.97
NPHP1-201ENST00000316534 A0A0A0MQY5 61 aa2.72□□□□□ -1.97
NPHP1-201ENST00000316534 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
NPHP1-201ENST00000316534 KRTAP19-4Q3LI73 84 aa2.7□□□□□ -1.98
NPHP1-201ENST00000316534 KRTAP19-7Q3SYF9 63 aa2.69□□□□□ -1.98
NPHP1-201ENST00000316534 KRTAP12-3P60328 96 aa2.68□□□□□ -1.98
NPHP1-201ENST00000316534 FSIP2Q5CZC0 6907 aa2.66□□□□□ -1.98
NPHP1-201ENST00000316534 KRTAP9-9Q9BYP9 154 aa2.66□□□□□ -1.98
NPHP1-201ENST00000316534 KRTAP9-4Q9BYQ2 154 aa2.66□□□□□ -1.98
NPHP1-201ENST00000316534 KRTAP19-5Q3LI72 72 aa2.65□□□□□ -1.98
NPHP1-201ENST00000316534 KRTAP9-7A8MTY7 169 aa2.64□□□□□ -1.99
NPHP1-201ENST00000316534 KRTAP4-8A0A0G2JLE6 195 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms