RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 DNAH5Q8TE73 4624 aa5.84□□□□□ -1.47
SH3PXD2A-201ENST00000315994 VPS13DQ5THJ4 4388 aa5.8□□□□□ -1.48
SH3PXD2A-201ENST00000315994 DNAH17Q9UFH2 4485 aa5.75□□□□□ -1.49
SH3PXD2A-201ENST00000315994 DNAH10Q8IVF4 4471 aa5.75□□□□□ -1.49
SH3PXD2A-201ENST00000315994 DNAH11Q96DT5 4516 aa5.75□□□□□ -1.49
SH3PXD2A-201ENST00000315994 DNHD1Q96M86 4753 aa5.69□□□□□ -1.5
SH3PXD2A-201ENST00000315994 CSMD3Q7Z407 3707 aa5.69□□□□□ -1.5
SH3PXD2A-201ENST00000315994 DNAH3Q8TD57 4116 aa5.66□□□□□ -1.5
SH3PXD2A-201ENST00000315994 STARD9Q9P2P6 4700 aa5.65□□□□□ -1.5
SH3PXD2A-201ENST00000315994 ANK2Q01484 3957 aa5.65□□□□□ -1.5
SH3PXD2A-201ENST00000315994 DYNC1H1Q14204 4646 aaKnown RBP5.62□□□□□ -1.51
SH3PXD2A-201ENST00000315994 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
SH3PXD2A-201ENST00000315994 DNAH2Q9P225 4427 aa5.6□□□□□ -1.51
SH3PXD2A-201ENST00000315994 INE1O15225 51 aa5.59□□□□□ -1.52
SH3PXD2A-201ENST00000315994 LRP1BQ9NZR2 4599 aa5.58□□□□□ -1.52
SH3PXD2A-201ENST00000315994 DYNC2H1Q8NCM8 4307 aaKnown RBP5.57□□□□□ -1.52
SH3PXD2A-201ENST00000315994 LORP23490 312 aaPredicted RBP5.54□□□□□ -1.52
SH3PXD2A-201ENST00000315994 FAT2Q9NYQ8 4349 aa5.54□□□□□ -1.52
SH3PXD2A-201ENST00000315994 PRKDCP78527 4128 aaKnown RBP5.53□□□□□ -1.52
SH3PXD2A-201ENST00000315994 KRTAP4-1Q9BYQ7 146 aa5.52□□□□□ -1.53
SH3PXD2A-201ENST00000315994 CRCT1Q9UGL9 99 aa5.51□□□□□ -1.53
SH3PXD2A-201ENST00000315994 SACSQ9NZJ4 4579 aa5.5□□□□□ -1.53
SH3PXD2A-201ENST00000315994 KRTAP23-1A1A580 65 aa5.48□□□□□ -1.53
SH3PXD2A-201ENST00000315994 DNAH6Q9C0G6 4158 aa5.46□□□□□ -1.54
SH3PXD2A-201ENST00000315994 CMYA5Q8N3K9 4069 aa5.45□□□□□ -1.54
SH3PXD2A-201ENST00000315994 FAT1Q14517 4588 aa5.44□□□□□ -1.54
SH3PXD2A-201ENST00000315994 MT1HP80294 61 aa5.42□□□□□ -1.54
SH3PXD2A-201ENST00000315994 DNAH8Q96JB1 4490 aa5.41□□□□□ -1.54
SH3PXD2A-201ENST00000315994 KMT2AQ03164 3969 aa5.4□□□□□ -1.54
SH3PXD2A-201ENST00000315994 KRTAP12-3P60328 96 aa5.4□□□□□ -1.54
SH3PXD2A-201ENST00000315994 LCE3AQ5TA76 89 aa5.38□□□□□ -1.55
SH3PXD2A-201ENST00000315994 KRTAP8-1Q8IUC2 63 aa5.36□□□□□ -1.55
SH3PXD2A-201ENST00000315994 RYR1P21817 5038 aa5.36□□□□□ -1.55
SH3PXD2A-201ENST00000315994 MT2AP02795 61 aa5.3□□□□□ -1.56
SH3PXD2A-201ENST00000315994 VPS13BQ7Z7G8 4022 aa5.29□□□□□ -1.56
SH3PXD2A-201ENST00000315994 SPRR2GQ9BYE4 73 aa5.27□□□□□ -1.57
SH3PXD2A-201ENST00000315994 KRTAP17-1Q9BYP8 105 aa5.25□□□□□ -1.57
SH3PXD2A-201ENST00000315994 DNAH7Q8WXX0 4024 aa5.25□□□□□ -1.57
SH3PXD2A-201ENST00000315994 APOBP04114 4563 aaKnown RBP5.25□□□□□ -1.57
SH3PXD2A-201ENST00000315994 RYR3Q15413 4870 aa5.22□□□□□ -1.57
SH3PXD2A-201ENST00000315994 MT1FP04733 61 aa5.19□□□□□ -1.58
SH3PXD2A-201ENST00000315994 HECTD4Q9Y4D8 3996 aa5.17□□□□□ -1.58
SH3PXD2A-201ENST00000315994 RYR2Q92736 4967 aa5.17□□□□□ -1.58
SH3PXD2A-201ENST00000315994 LYSTQ99698 3801 aa5.16□□□□□ -1.58
SH3PXD2A-201ENST00000315994 KIAA1109Q2LD37 5005 aa5.13□□□□□ -1.59
SH3PXD2A-201ENST00000315994 FRAS1Q86XX4 4008 aa5.12□□□□□ -1.59
SH3PXD2A-201ENST00000315994 FAT3Q8TDW7 4589 aa5.09□□□□□ -1.6
SH3PXD2A-201ENST00000315994 HYDINQ4G0P3 5121 aa5.03□□□□□ -1.6
SH3PXD2A-201ENST00000315994 LRP1Q07954 4544 aaKnown RBP5.01□□□□□ -1.61
SH3PXD2A-201ENST00000315994 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
SH3PXD2A-201ENST00000315994 HSPG2P98160 4391 aa5□□□□□ -1.61
SH3PXD2A-201ENST00000315994 KRTAP10-5P60370 271 aa4.99□□□□□ -1.61
SH3PXD2A-201ENST00000315994 BIRC6Q9NR09 4857 aa4.97□□□□□ -1.61
SH3PXD2A-201ENST00000315994 MYCBP2O75592 4640 aa4.97□□□□□ -1.61
SH3PXD2A-201ENST00000315994 KRTAP10-7P60409 375 aaPredicted RBP4.95□□□□□ -1.62
SH3PXD2A-201ENST00000315994 KRTAP19-8Q3LI54 63 aa4.95□□□□□ -1.62
SH3PXD2A-201ENST00000315994 KRTAP19-1Q8IUB9 90 aa4.93□□□□□ -1.62
SH3PXD2A-201ENST00000315994 KRTAP19-5Q3LI72 72 aa4.9□□□□□ -1.62
SH3PXD2A-201ENST00000315994 HERC2O95714 4834 aa4.9□□□□□ -1.63
SH3PXD2A-201ENST00000315994 PKD1P98161 4303 aa4.89□□□□□ -1.63
SH3PXD2A-201ENST00000315994 HERC1Q15751 4861 aa4.89□□□□□ -1.63
SH3PXD2A-201ENST00000315994 PKHD1P08F94 4074 aa4.85□□□□□ -1.63
SH3PXD2A-201ENST00000315994 KRTAP9-8Q9BYQ0 159 aa4.84□□□□□ -1.63
SH3PXD2A-201ENST00000315994 LCE2CQ5TA81 110 aa4.84□□□□□ -1.64
SH3PXD2A-201ENST00000315994 KRTAP19-4Q3LI73 84 aa4.81□□□□□ -1.64
SH3PXD2A-201ENST00000315994 PKHD1L1Q86WI1 4243 aa4.8□□□□□ -1.64
SH3PXD2A-201ENST00000315994 SPRR2EP22531 72 aa4.79□□□□□ -1.64
SH3PXD2A-201ENST00000315994 SPRR2BP35325 72 aa4.79□□□□□ -1.64
SH3PXD2A-201ENST00000315994 SPRR2AP35326 72 aa4.79□□□□□ -1.64
SH3PXD2A-201ENST00000315994 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
SH3PXD2A-201ENST00000315994 MT1BP07438 61 aa4.77□□□□□ -1.65
SH3PXD2A-201ENST00000315994 MT1XP80297 61 aa4.77□□□□□ -1.65
SH3PXD2A-201ENST00000315994 TNXBP22105 4242 aa4.73□□□□□ -1.65
SH3PXD2A-201ENST00000315994 KRTAP9-3Q9BYQ3 159 aa4.73□□□□□ -1.65
SH3PXD2A-201ENST00000315994 LRP2P98164 4655 aa4.72□□□□□ -1.65
SH3PXD2A-201ENST00000315994 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
SH3PXD2A-201ENST00000315994 KRTAP19-2Q3LHN2 52 aa4.67□□□□□ -1.66
SH3PXD2A-201ENST00000315994 LPAP08519 4548 aa4.67□□□□□ -1.66
SH3PXD2A-201ENST00000315994 KMT2CQ8NEZ4 4911 aaKnown RBP4.66□□□□□ -1.66
SH3PXD2A-201ENST00000315994 SPRR2DP22532 72 aa4.66□□□□□ -1.66
SH3PXD2A-201ENST00000315994 PCLOQ9Y6V0 5065 aa4.65□□□□□ -1.67
SH3PXD2A-201ENST00000315994 LCE2BO14633 110 aa4.58□□□□□ -1.68
SH3PXD2A-201ENST00000315994 MUC17Q685J3 4493 aa4.56□□□□□ -1.68
SH3PXD2A-201ENST00000315994 EPPK1P58107 5090 aaKnown RBP4.54□□□□□ -1.68
SH3PXD2A-201ENST00000315994 KRTAP4-8A0A0G2JLE6 195 aa4.51□□□□□ -1.69
SH3PXD2A-201ENST00000315994 KRTAP4-8Q9BYQ9 185 aa4.51□□□□□ -1.69
SH3PXD2A-201ENST00000315994 ABCA13Q86UQ4 5058 aa4.5□□□□□ -1.69
SH3PXD2A-201ENST00000315994 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
SH3PXD2A-201ENST00000315994 FLGP20930 4061 aaPredicted RBP4.48□□□□□ -1.69
SH3PXD2A-201ENST00000315994 MT1GP13640 62 aa4.45□□□□□ -1.7
SH3PXD2A-201ENST00000315994 LCE3BQ5TA77 95 aa4.35□□□□□ -1.71
SH3PXD2A-201ENST00000315994 KRTAP19-6Q3LI70 58 aa4.32□□□□□ -1.72
SH3PXD2A-201ENST00000315994 KRTAP19-3Q7Z4W3 81 aa4.32□□□□□ -1.72
SH3PXD2A-201ENST00000315994 LCE2AQ5TA79 106 aaPredicted RBP4.31□□□□□ -1.72
SH3PXD2A-201ENST00000315994 KRTAP9-2Q9BYQ4 174 aa4.3□□□□□ -1.72
SH3PXD2A-201ENST00000315994 MT1LQ93083 61 aa4.29□□□□□ -1.72
SH3PXD2A-201ENST00000315994 MT1EP04732 61 aa4.29□□□□□ -1.72
SH3PXD2A-201ENST00000315994 FAT4Q6V0I7 4981 aa4.25□□□□□ -1.73
SH3PXD2A-201ENST00000315994 LCE2DQ5TA82 110 aaPredicted RBP4.24□□□□□ -1.73
SH3PXD2A-201ENST00000315994 RNF213Q63HN8 5207 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 248.1 ms