RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 FAT3Q8TDW7 4589 aa7.97□□□□□ -1.13
TFE3-201ENST00000315869 C20orf166-AS1Q96NR2 134 aa7.97□□□□□ -1.13
TFE3-201ENST00000315869 RPS29P62273 56 aaKnown RBP7.96□□□□□ -1.14
TFE3-201ENST00000315869 K7ERS5 55 aa7.95□□□□□ -1.14
TFE3-201ENST00000315869 H1FX-AS1Q4G0G2 97 aa7.95□□□□□ -1.14
TFE3-201ENST00000315869 PKHD1L1Q86WI1 4243 aa7.93□□□□□ -1.14
TFE3-201ENST00000315869 RYR1P21817 5038 aa7.92□□□□□ -1.14
TFE3-201ENST00000315869 A0A0D9SG42 100 aa7.9□□□□□ -1.15
TFE3-201ENST00000315869 COX6B2Q6YFQ2 88 aa7.89□□□□□ -1.15
TFE3-201ENST00000315869 KRTAP4-5Q9BYR2 181 aa7.79□□□□□ -1.16
TFE3-201ENST00000315869 KRTAP25-1Q3LHN0 102 aa7.78□□□□□ -1.16
TFE3-201ENST00000315869 TNXBP22105 4242 aa7.76□□□□□ -1.17
TFE3-201ENST00000315869 KRTAP10-8P60410 259 aa7.72□□□□□ -1.17
TFE3-201ENST00000315869 J3QL48 77 aa7.71□□□□□ -1.18
TFE3-201ENST00000315869 RPL37P61927 97 aaKnown RBP7.68□□□□□ -1.18
TFE3-201ENST00000315869 S4R3F8 94 aa7.68□□□□□ -1.18
TFE3-201ENST00000315869 ABCA13Q86UQ4 5058 aa7.65□□□□□ -1.18
TFE3-201ENST00000315869 MT1HL1P0DM35 61 aa7.65□□□□□ -1.19
TFE3-201ENST00000315869 ROMO1P60602 79 aa7.64□□□□□ -1.19
TFE3-201ENST00000315869 KRTAP13-4Q3LI77 160 aa7.62□□□□□ -1.19
TFE3-201ENST00000315869 SPINT4Q6UDR6 99 aa7.61□□□□□ -1.19
TFE3-201ENST00000315869 LPAP08519 4548 aa7.6□□□□□ -1.19
TFE3-201ENST00000315869 XP32Q5T750 250 aa7.6□□□□□ -1.19
TFE3-201ENST00000315869 P0C880 135 aa7.6□□□□□ -1.19
TFE3-201ENST00000315869 KRTAP10-6P60371 365 aaPredicted RBP7.59□□□□□ -1.19
TFE3-201ENST00000315869 LRP2P98164 4655 aa7.58□□□□□ -1.2
TFE3-201ENST00000315869 KRTAP3-3Q9BYR6 98 aa7.58□□□□□ -1.2
TFE3-201ENST00000315869 C10orf95Q9H7T3 257 aa7.55□□□□□ -1.2
TFE3-201ENST00000315869 HERC2O95714 4834 aa7.53□□□□□ -1.2
TFE3-201ENST00000315869 KRTAP3-2Q9BYR7 98 aa7.5□□□□□ -1.21
TFE3-201ENST00000315869 TPRXLQ17RH7 258 aa7.43□□□□□ -1.22
TFE3-201ENST00000315869 KRTAP12-2P59991 146 aa7.41□□□□□ -1.22
TFE3-201ENST00000315869 MUC2Q02817 5179 aa7.4□□□□□ -1.22
TFE3-201ENST00000315869 BIRC6Q9NR09 4857 aa7.34□□□□□ -1.23
TFE3-201ENST00000315869 NDUFAF8A1L188 74 aa7.33□□□□□ -1.24
TFE3-201ENST00000315869 HERC1Q15751 4861 aa7.32□□□□□ -1.24
TFE3-201ENST00000315869 KRTAP12-1P59990 96 aa7.3□□□□□ -1.24
TFE3-201ENST00000315869 PCLOQ9Y6V0 5065 aa7.29□□□□□ -1.24
TFE3-201ENST00000315869 M0QZ58 72 aa7.29□□□□□ -1.24
TFE3-201ENST00000315869 R4GN34 69 aa7.25□□□□□ -1.25
TFE3-201ENST00000315869 RNF213Q63HN8 5207 aa7.2□□□□□ -1.26
TFE3-201ENST00000315869 KRTAP4-1Q9BYQ7 146 aa7.14□□□□□ -1.27
TFE3-201ENST00000315869 SEC61BP60468 96 aaKnown RBP7.05□□□□□ -1.28
TFE3-201ENST00000315869 FAT4Q6V0I7 4981 aa7.03□□□□□ -1.28
TFE3-201ENST00000315869 UBR4Q5T4S7 5183 aa7.03□□□□□ -1.28
TFE3-201ENST00000315869 KRTAP15-1Q3LI76 137 aa7.02□□□□□ -1.29
TFE3-201ENST00000315869 LORP23490 312 aaPredicted RBP7.01□□□□□ -1.29
TFE3-201ENST00000315869 CAMK2N1Q7Z7J9 78 aa6.99□□□□□ -1.29
TFE3-201ENST00000315869 M0R2T5 61 aa6.98□□□□□ -1.29
TFE3-201ENST00000315869 MUC17Q685J3 4493 aa6.97□□□□□ -1.29
TFE3-201ENST00000315869 HMCN2Q8NDA2 5059 aa6.96□□□□□ -1.3
TFE3-201ENST00000315869 A0A0A0MQY5 61 aa6.89□□□□□ -1.31
TFE3-201ENST00000315869 PLAC4Q8WY50 150 aa6.85□□□□□ -1.31
TFE3-201ENST00000315869 KRTAP19-2Q3LHN2 52 aa6.75□□□□□ -1.33
TFE3-201ENST00000315869 LUZP6Q538Z0 58 aa6.71□□□□□ -1.34
TFE3-201ENST00000315869 FSIP2Q5CZC0 6907 aa6.63□□□□□ -1.35
TFE3-201ENST00000315869 FLGP20930 4061 aaPredicted RBP6.63□□□□□ -1.35
TFE3-201ENST00000315869 PP632Q6XCG6 107 aa6.61□□□□□ -1.35
TFE3-201ENST00000315869 TNP1P09430 55 aa6.59□□□□□ -1.35
TFE3-201ENST00000315869 LCE2CQ5TA81 110 aa6.56□□□□□ -1.36
TFE3-201ENST00000315869 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
TFE3-201ENST00000315869 MT1HP80294 61 aa6.44□□□□□ -1.38
TFE3-201ENST00000315869 USH2AO75445 5202 aa6.34□□□□□ -1.39
TFE3-201ENST00000315869 MT1FP04733 61 aa6.29□□□□□ -1.4
TFE3-201ENST00000315869 MT2AP02795 61 aa6.26□□□□□ -1.41
TFE3-201ENST00000315869 KRTAP9-8Q9BYQ0 159 aa6.21□□□□□ -1.42
TFE3-201ENST00000315869 KRTAP19-1Q8IUB9 90 aa6.2□□□□□ -1.42
TFE3-201ENST00000315869 LCE3AQ5TA76 89 aa6.18□□□□□ -1.42
TFE3-201ENST00000315869 SPRR2GQ9BYE4 73 aa6.15□□□□□ -1.42
TFE3-201ENST00000315869 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
TFE3-201ENST00000315869 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
TFE3-201ENST00000315869 KMT2DO14686 5537 aa5.97□□□□□ -1.45
TFE3-201ENST00000315869 KRTAP9-3Q9BYQ3 159 aa5.95□□□□□ -1.46
TFE3-201ENST00000315869 MT1BP07438 61 aa5.93□□□□□ -1.46
TFE3-201ENST00000315869 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
TFE3-201ENST00000315869 KRTAP12-3P60328 96 aa5.88□□□□□ -1.47
TFE3-201ENST00000315869 LCE2AQ5TA79 106 aaPredicted RBP5.88□□□□□ -1.47
TFE3-201ENST00000315869 LCE2BO14633 110 aa5.86□□□□□ -1.47
TFE3-201ENST00000315869 KRTAP8-1Q8IUC2 63 aa5.85□□□□□ -1.47
TFE3-201ENST00000315869 MT1XP80297 61 aa5.84□□□□□ -1.47
TFE3-201ENST00000315869 KRTAP19-8Q3LI54 63 aa5.84□□□□□ -1.47
TFE3-201ENST00000315869 KRTAP10-5P60370 271 aa5.84□□□□□ -1.48
TFE3-201ENST00000315869 KRTAP10-7P60409 375 aaPredicted RBP5.79□□□□□ -1.48
TFE3-201ENST00000315869 PRO2289Q9P1D8 64 aa5.73□□□□□ -1.49
TFE3-201ENST00000315869 DSTQ03001 7570 aaKnown RBP5.63□□□□□ -1.51
TFE3-201ENST00000315869 SSPOA2VEC9 5147 aa5.61□□□□□ -1.51
TFE3-201ENST00000315869 KRTAP19-5Q3LI72 72 aa5.58□□□□□ -1.52
TFE3-201ENST00000315869 KRTAP4-8A0A0G2JLE6 195 aa5.57□□□□□ -1.52
TFE3-201ENST00000315869 KRTAP4-8Q9BYQ9 185 aa5.57□□□□□ -1.52
TFE3-201ENST00000315869 INE1O15225 51 aa5.53□□□□□ -1.52
TFE3-201ENST00000315869 OBSCNQ5VST9 7968 aa5.49□□□□□ -1.53
TFE3-201ENST00000315869 LCE3CQ5T5A8 94 aa5.46□□□□□ -1.54
TFE3-201ENST00000315869 MUC12Q9UKN1 5478 aa5.42□□□□□ -1.54
TFE3-201ENST00000315869 FCGBPQ9Y6R7 5405 aaPredicted RBP5.35□□□□□ -1.55
TFE3-201ENST00000315869 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.55
TFE3-201ENST00000315869 SYNE2Q8WXH0 6885 aaKnown RBP5.33□□□□□ -1.56
TFE3-201ENST00000315869 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
TFE3-201ENST00000315869 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
TFE3-201ENST00000315869 CRCT1Q9UGL9 99 aa5.26□□□□□ -1.57
TFE3-201ENST00000315869 MACF1Q9UPN3 7388 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms