RNA–Protein interactions for RNA: ENST00000314891.10

LPCAT4-201, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT4, Length 2,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-201ENST00000314891 SEC61GP60059 68 aa10.97□□□□□ -0.65
LPCAT4-201ENST00000314891 KTN1-AS1Q86SY8 53 aa10.92□□□□□ -0.66
LPCAT4-201ENST00000314891 KRTAP4-5Q9BYR2 181 aa10.83□□□□□ -0.68
LPCAT4-201ENST00000314891 H0YAA0 97 aa10.8□□□□□ -0.68
LPCAT4-201ENST00000314891 KRTAP3-3Q9BYR6 98 aa10.79□□□□□ -0.68
LPCAT4-201ENST00000314891 A0A1B0GU33 70 aa10.76□□□□□ -0.69
LPCAT4-201ENST00000314891 LPAP08519 4548 aa10.76□□□□□ -0.69
LPCAT4-201ENST00000314891 LRP2P98164 4655 aa10.75□□□□□ -0.69
LPCAT4-201ENST00000314891 H1FX-AS1Q4G0G2 97 aa10.74□□□□□ -0.69
LPCAT4-201ENST00000314891 ABCA13Q86UQ4 5058 aa10.74□□□□□ -0.69
LPCAT4-201ENST00000314891 TPRXLQ17RH7 258 aa10.73□□□□□ -0.69
LPCAT4-201ENST00000314891 S4R3F8 94 aa10.68□□□□□ -0.7
LPCAT4-201ENST00000314891 ADM2Q7Z4H4 148 aa10.63□□□□□ -0.71
LPCAT4-201ENST00000314891 KRTAP10-6P60371 365 aaPredicted RBP10.6□□□□□ -0.71
LPCAT4-201ENST00000314891 PRAC1Q96KF2 57 aa10.58□□□□□ -0.72
LPCAT4-201ENST00000314891 RBM12B-AS1Q9P1G2 102 aa10.56□□□□□ -0.72
LPCAT4-201ENST00000314891 KRTAP3-2Q9BYR7 98 aa10.55□□□□□ -0.72
LPCAT4-201ENST00000314891 KRTAP13-4Q3LI77 160 aa10.46□□□□□ -0.73
LPCAT4-201ENST00000314891 P0C880 135 aa10.44□□□□□ -0.74
LPCAT4-201ENST00000314891 J3QL48 77 aa10.38□□□□□ -0.75
LPCAT4-201ENST00000314891 HERC2O95714 4834 aa10.37□□□□□ -0.75
LPCAT4-201ENST00000314891 A0A0D9SG42 100 aa10.32□□□□□ -0.76
LPCAT4-201ENST00000314891 CSAG1Q6PB30 78 aa10.32□□□□□ -0.76
LPCAT4-201ENST00000314891 SEC61BP60468 96 aaKnown RBP10.3□□□□□ -0.76
LPCAT4-201ENST00000314891 KRTAP4-1Q9BYQ7 146 aa10.28□□□□□ -0.76
LPCAT4-201ENST00000314891 K7ERS5 55 aa10.27□□□□□ -0.76
LPCAT4-201ENST00000314891 MUC17Q685J3 4493 aa10.27□□□□□ -0.77
LPCAT4-201ENST00000314891 BIRC6Q9NR09 4857 aa10.18□□□□□ -0.78
LPCAT4-201ENST00000314891 KRTAP12-2P59991 146 aa10.09□□□□□ -0.79
LPCAT4-201ENST00000314891 LINC01554Q52M75 96 aa10.07□□□□□ -0.8
LPCAT4-201ENST00000314891 KRTAP19-2Q3LHN2 52 aa10.05□□□□□ -0.8
LPCAT4-201ENST00000314891 CRIPTQ9P021 101 aa10.05□□□□□ -0.8
LPCAT4-201ENST00000314891 ROMO1P60602 79 aa10.04□□□□□ -0.8
LPCAT4-201ENST00000314891 KRTAP25-1Q3LHN0 102 aa10.04□□□□□ -0.8
LPCAT4-201ENST00000314891 M0QZ58 72 aa10.03□□□□□ -0.8
LPCAT4-201ENST00000314891 KRTAP12-1P59990 96 aa10.02□□□□□ -0.81
LPCAT4-201ENST00000314891 MUC2Q02817 5179 aa9.98□□□□□ -0.81
LPCAT4-201ENST00000314891 SPINT4Q6UDR6 99 aa9.98□□□□□ -0.81
LPCAT4-201ENST00000314891 PCLOQ9Y6V0 5065 aa9.97□□□□□ -0.81
LPCAT4-201ENST00000314891 LORP23490 312 aaPredicted RBP9.91□□□□□ -0.82
LPCAT4-201ENST00000314891 HERC1Q15751 4861 aa9.9□□□□□ -0.82
LPCAT4-201ENST00000314891 R4GN34 69 aa9.89□□□□□ -0.83
LPCAT4-201ENST00000314891 HMCN2Q8NDA2 5059 aa9.78□□□□□ -0.84
LPCAT4-201ENST00000314891 FLGP20930 4061 aaPredicted RBP9.75□□□□□ -0.85
LPCAT4-201ENST00000314891 C10orf95Q9H7T3 257 aa9.75□□□□□ -0.85
LPCAT4-201ENST00000314891 LCE2CQ5TA81 110 aa9.56□□□□□ -0.88
LPCAT4-201ENST00000314891 FAT4Q6V0I7 4981 aa9.51□□□□□ -0.89
LPCAT4-201ENST00000314891 UBR4Q5T4S7 5183 aa9.41□□□□□ -0.9
LPCAT4-201ENST00000314891 RNF213Q63HN8 5207 aa9.37□□□□□ -0.91
LPCAT4-201ENST00000314891 CAMK2N1Q7Z7J9 78 aa9.34□□□□□ -0.91
LPCAT4-201ENST00000314891 MT1HP80294 61 aa9.3□□□□□ -0.92
LPCAT4-201ENST00000314891 M0R2T5 61 aa9.26□□□□□ -0.93
LPCAT4-201ENST00000314891 KRTAP19-1Q8IUB9 90 aa9.16□□□□□ -0.94
LPCAT4-201ENST00000314891 SPRR2GQ9BYE4 73 aa9.16□□□□□ -0.94
LPCAT4-201ENST00000314891 KRTAP15-1Q3LI76 137 aa9.1□□□□□ -0.95
LPCAT4-201ENST00000314891 MT1FP04733 61 aa9.09□□□□□ -0.95
LPCAT4-201ENST00000314891 MT2AP02795 61 aa9.08□□□□□ -0.96
LPCAT4-201ENST00000314891 KRTAP9-8Q9BYQ0 159 aa9.06□□□□□ -0.96
LPCAT4-201ENST00000314891 KRTAP10-10P60014 251 aa9.03□□□□□ -0.96
LPCAT4-201ENST00000314891 PLAC4Q8WY50 150 aa8.98□□□□□ -0.97
LPCAT4-201ENST00000314891 PP632Q6XCG6 107 aa8.96□□□□□ -0.98
LPCAT4-201ENST00000314891 TNP1P09430 55 aa8.94□□□□□ -0.98
LPCAT4-201ENST00000314891 KRTAP19-8Q3LI54 63 aa8.79□□□□□ -1
LPCAT4-201ENST00000314891 H3BS24 57 aa8.75□□□□□ -1.01
LPCAT4-201ENST00000314891 KRTAP23-1A1A580 65 aa8.74□□□□□ -1.01
LPCAT4-201ENST00000314891 NDUFAF8A1L188 74 aa8.74□□□□□ -1.01
LPCAT4-201ENST00000314891 MT1BP07438 61 aa8.73□□□□□ -1.01
LPCAT4-201ENST00000314891 KRTAP9-3Q9BYQ3 159 aa8.68□□□□□ -1.02
LPCAT4-201ENST00000314891 KRTAP10-5P60370 271 aa8.6□□□□□ -1.03
LPCAT4-201ENST00000314891 MT1XP80297 61 aa8.6□□□□□ -1.03
LPCAT4-201ENST00000314891 LCE3AQ5TA76 89 aa8.57□□□□□ -1.04
LPCAT4-201ENST00000314891 LCE2AQ5TA79 106 aaPredicted RBP8.43□□□□□ -1.06
LPCAT4-201ENST00000314891 LCE2BO14633 110 aa8.4□□□□□ -1.07
LPCAT4-201ENST00000314891 KRTAP10-7P60409 375 aaPredicted RBP8.34□□□□□ -1.07
LPCAT4-201ENST00000314891 LCE2DQ5TA82 110 aaPredicted RBP8.34□□□□□ -1.07
LPCAT4-201ENST00000314891 KRTAP8-1Q8IUC2 63 aa8.32□□□□□ -1.08
LPCAT4-201ENST00000314891 KRTAP10-12P60413 245 aa8.31□□□□□ -1.08
LPCAT4-201ENST00000314891 SPRR5A0A1B0GTR4 108 aa8.3□□□□□ -1.08
LPCAT4-201ENST00000314891 LUZP6Q538Z0 58 aa8.29□□□□□ -1.08
LPCAT4-201ENST00000314891 PRO2289Q9P1D8 64 aa8.26□□□□□ -1.09
LPCAT4-201ENST00000314891 USH2AO75445 5202 aa8.24□□□□□ -1.09
LPCAT4-201ENST00000314891 KRTAP12-3P60328 96 aa8.15□□□□□ -1.1
LPCAT4-201ENST00000314891 KMT2DO14686 5537 aa7.97□□□□□ -1.13
LPCAT4-201ENST00000314891 KRTAP19-5Q3LI72 72 aa7.93□□□□□ -1.14
LPCAT4-201ENST00000314891 KRTAP4-8A0A0G2JLE6 195 aa7.91□□□□□ -1.14
LPCAT4-201ENST00000314891 KRTAP4-8Q9BYQ9 185 aa7.91□□□□□ -1.14
LPCAT4-201ENST00000314891 SSPOA2VEC9 5147 aa7.76□□□□□ -1.17
LPCAT4-201ENST00000314891 KRTAP19-7Q3SYF9 63 aa7.67□□□□□ -1.18
LPCAT4-201ENST00000314891 LCE3CQ5T5A8 94 aa7.66□□□□□ -1.18
LPCAT4-201ENST00000314891 A0A0A0MQY5 61 aa7.64□□□□□ -1.19
LPCAT4-201ENST00000314891 FSIP2Q5CZC0 6907 aa7.62□□□□□ -1.19
LPCAT4-201ENST00000314891 KRTAP19-6Q3LI70 58 aa7.59□□□□□ -1.19
LPCAT4-201ENST00000314891 KRTAP4-7Q9BYR0 210 aa7.45□□□□□ -1.22
LPCAT4-201ENST00000314891 MT1EP04732 61 aa7.45□□□□□ -1.22
LPCAT4-201ENST00000314891 KRTAP9-6A8MVA2 160 aa7.41□□□□□ -1.22
LPCAT4-201ENST00000314891 MT1LQ93083 61 aa7.4□□□□□ -1.22
LPCAT4-201ENST00000314891 FCGBPQ9Y6R7 5405 aaPredicted RBP7.24□□□□□ -1.25
LPCAT4-201ENST00000314891 KRTAP19-4Q3LI73 84 aa7.24□□□□□ -1.25
LPCAT4-201ENST00000314891 MUC12Q9UKN1 5478 aa7.09□□□□□ -1.27
LPCAT4-201ENST00000314891 KRTAP4-3Q9BYR4 195 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms