RNA–Protein interactions for RNA: ENST00000314138.10

RPL27A-201, Transcript of ribosomal protein L27a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL27A, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL27A-201ENST00000314138 LORP23490 312 aaPredicted RBP5.21□□□□□ -1.58
RPL27A-201ENST00000314138 KRTAP10-12P60413 245 aa5.18□□□□□ -1.58
RPL27A-201ENST00000314138 KRTAP8-1Q8IUC2 63 aa5.17□□□□□ -1.58
RPL27A-201ENST00000314138 DNAH9Q9NYC9 4486 aa5.16□□□□□ -1.58
RPL27A-201ENST00000314138 KRTAP12-3P60328 96 aa5.15□□□□□ -1.58
RPL27A-201ENST00000314138 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
RPL27A-201ENST00000314138 DNAH11Q96DT5 4516 aa5.12□□□□□ -1.59
RPL27A-201ENST00000314138 PLECQ15149 4684 aaKnown RBP5.1□□□□□ -1.59
RPL27A-201ENST00000314138 MT1HP80294 61 aa5.09□□□□□ -1.59
RPL27A-201ENST00000314138 PRKDCP78527 4128 aaKnown RBP5.09□□□□□ -1.59
RPL27A-201ENST00000314138 ANK2Q01484 3957 aa5.08□□□□□ -1.6
RPL27A-201ENST00000314138 DNAH1Q9P2D7 4330 aa5.08□□□□□ -1.6
RPL27A-201ENST00000314138 DNAH10Q8IVF4 4471 aa5.03□□□□□ -1.6
RPL27A-201ENST00000314138 DNAH5Q8TE73 4624 aa5.03□□□□□ -1.6
RPL27A-201ENST00000314138 CRCT1Q9UGL9 99 aa5.02□□□□□ -1.61
RPL27A-201ENST00000314138 STARD9Q9P2P6 4700 aa5.01□□□□□ -1.61
RPL27A-201ENST00000314138 KRTAP17-1Q9BYP8 105 aa4.96□□□□□ -1.62
RPL27A-201ENST00000314138 MT2AP02795 61 aa4.94□□□□□ -1.62
RPL27A-201ENST00000314138 RYR1P21817 5038 aa4.93□□□□□ -1.62
RPL27A-201ENST00000314138 KMT2AQ03164 3969 aa4.92□□□□□ -1.62
RPL27A-201ENST00000314138 KRTAP4-1Q9BYQ7 146 aa4.92□□□□□ -1.62
RPL27A-201ENST00000314138 LYSTQ99698 3801 aa4.9□□□□□ -1.62
RPL27A-201ENST00000314138 SPRR2FQ96RM1 72 aa4.89□□□□□ -1.63
RPL27A-201ENST00000314138 BIRC6Q9NR09 4857 aa4.88□□□□□ -1.63
RPL27A-201ENST00000314138 CMYA5Q8N3K9 4069 aa4.87□□□□□ -1.63
RPL27A-201ENST00000314138 FAT1Q14517 4588 aa4.86□□□□□ -1.63
RPL27A-201ENST00000314138 VPS13DQ5THJ4 4388 aa4.85□□□□□ -1.63
RPL27A-201ENST00000314138 KRTAP10-5P60370 271 aa4.81□□□□□ -1.64
RPL27A-201ENST00000314138 DYNC1H1Q14204 4646 aaKnown RBP4.8□□□□□ -1.64
RPL27A-201ENST00000314138 DNAH3Q8TD57 4116 aa4.79□□□□□ -1.64
RPL27A-201ENST00000314138 LRP1BQ9NZR2 4599 aa4.77□□□□□ -1.65
RPL27A-201ENST00000314138 MT1FP04733 61 aa4.77□□□□□ -1.65
RPL27A-201ENST00000314138 DNAH7Q8WXX0 4024 aa4.77□□□□□ -1.65
RPL27A-201ENST00000314138 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
RPL27A-201ENST00000314138 KIAA1109Q2LD37 5005 aa4.76□□□□□ -1.65
RPL27A-201ENST00000314138 SPRR2GQ9BYE4 73 aa4.75□□□□□ -1.65
RPL27A-201ENST00000314138 DNAH2Q9P225 4427 aa4.73□□□□□ -1.65
RPL27A-201ENST00000314138 DNAH8Q96JB1 4490 aa4.73□□□□□ -1.65
RPL27A-201ENST00000314138 DNAH17Q9UFH2 4485 aa4.72□□□□□ -1.65
RPL27A-201ENST00000314138 RYR3Q15413 4870 aa4.7□□□□□ -1.66
RPL27A-201ENST00000314138 SPRR2EP22531 72 aa4.7□□□□□ -1.66
RPL27A-201ENST00000314138 SPRR2BP35325 72 aa4.7□□□□□ -1.66
RPL27A-201ENST00000314138 SPRR2AP35326 72 aa4.7□□□□□ -1.66
RPL27A-201ENST00000314138 HYDINQ4G0P3 5121 aa4.68□□□□□ -1.66
RPL27A-201ENST00000314138 DNAH6Q9C0G6 4158 aa4.67□□□□□ -1.66
RPL27A-201ENST00000314138 DYNC2H1Q8NCM8 4307 aaKnown RBP4.67□□□□□ -1.66
RPL27A-201ENST00000314138 HERC2O95714 4834 aa4.67□□□□□ -1.66
RPL27A-201ENST00000314138 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.67
RPL27A-201ENST00000314138 MYCBP2O75592 4640 aa4.64□□□□□ -1.67
RPL27A-201ENST00000314138 SACSQ9NZJ4 4579 aa4.64□□□□□ -1.67
RPL27A-201ENST00000314138 VPS13BQ7Z7G8 4022 aa4.63□□□□□ -1.67
RPL27A-201ENST00000314138 FRAS1Q86XX4 4008 aa4.62□□□□□ -1.67
RPL27A-201ENST00000314138 KMT2CQ8NEZ4 4911 aaKnown RBP4.62□□□□□ -1.67
RPL27A-201ENST00000314138 KRTAP9-2Q9BYQ4 174 aa4.61□□□□□ -1.67
RPL27A-201ENST00000314138 PCLOQ9Y6V0 5065 aa4.6□□□□□ -1.67
RPL27A-201ENST00000314138 FAT2Q9NYQ8 4349 aa4.6□□□□□ -1.67
RPL27A-201ENST00000314138 PKHD1P08F94 4074 aa4.6□□□□□ -1.67
RPL27A-201ENST00000314138 APOBP04114 4563 aaKnown RBP4.58□□□□□ -1.68
RPL27A-201ENST00000314138 SPRR2DP22532 72 aa4.58□□□□□ -1.68
RPL27A-201ENST00000314138 LRP1Q07954 4544 aaKnown RBP4.58□□□□□ -1.68
RPL27A-201ENST00000314138 KRTAP9-6A0A140TA67 174 aa4.57□□□□□ -1.68
RPL27A-201ENST00000314138 RYR2Q92736 4967 aa4.57□□□□□ -1.68
RPL27A-201ENST00000314138 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
RPL27A-201ENST00000314138 FAT3Q8TDW7 4589 aa4.56□□□□□ -1.68
RPL27A-201ENST00000314138 HECTD4Q9Y4D8 3996 aa4.55□□□□□ -1.68
RPL27A-201ENST00000314138 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
RPL27A-201ENST00000314138 HERC1Q15751 4861 aa4.53□□□□□ -1.68
RPL27A-201ENST00000314138 KRTAP19-1Q8IUB9 90 aa4.5□□□□□ -1.69
RPL27A-201ENST00000314138 KRTAP19-8Q3LI54 63 aa4.5□□□□□ -1.69
RPL27A-201ENST00000314138 LCE2BO14633 110 aa4.5□□□□□ -1.69
RPL27A-201ENST00000314138 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
RPL27A-201ENST00000314138 EPPK1P58107 5090 aaKnown RBP4.45□□□□□ -1.7
RPL27A-201ENST00000314138 LCE2DQ5TA82 110 aaPredicted RBP4.42□□□□□ -1.7
RPL27A-201ENST00000314138 KRTAP9-8Q9BYQ0 159 aa4.4□□□□□ -1.71
RPL27A-201ENST00000314138 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
RPL27A-201ENST00000314138 PKD1P98161 4303 aa4.35□□□□□ -1.71
RPL27A-201ENST00000314138 HSPG2P98160 4391 aa4.35□□□□□ -1.71
RPL27A-201ENST00000314138 LRP2P98164 4655 aa4.35□□□□□ -1.71
RPL27A-201ENST00000314138 KRTAP9-3Q9BYQ3 159 aa4.34□□□□□ -1.71
RPL27A-201ENST00000314138 LCE2CQ5TA81 110 aa4.34□□□□□ -1.72
RPL27A-201ENST00000314138 MT1GP13640 62 aa4.27□□□□□ -1.73
RPL27A-201ENST00000314138 MT1BP07438 61 aa4.27□□□□□ -1.73
RPL27A-201ENST00000314138 PKHD1L1Q86WI1 4243 aa4.25□□□□□ -1.73
RPL27A-201ENST00000314138 KRTAP9-7A8MTY7 169 aa4.24□□□□□ -1.73
RPL27A-201ENST00000314138 ABCA13Q86UQ4 5058 aa4.24□□□□□ -1.73
RPL27A-201ENST00000314138 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.74
RPL27A-201ENST00000314138 LPAP08519 4548 aa4.21□□□□□ -1.74
RPL27A-201ENST00000314138 LCE2AQ5TA79 106 aaPredicted RBP4.2□□□□□ -1.74
RPL27A-201ENST00000314138 MT1XP80297 61 aa4.19□□□□□ -1.74
RPL27A-201ENST00000314138 KRTAP20-1Q3LI63 56 aa4.18□□□□□ -1.74
RPL27A-201ENST00000314138 UBR4Q5T4S7 5183 aa4.17□□□□□ -1.74
RPL27A-201ENST00000314138 LCE3BQ5TA77 95 aa4.11□□□□□ -1.75
RPL27A-201ENST00000314138 KRTAP19-3Q7Z4W3 81 aa4.07□□□□□ -1.76
RPL27A-201ENST00000314138 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
RPL27A-201ENST00000314138 TNXBP22105 4242 aa4.05□□□□□ -1.76
RPL27A-201ENST00000314138 KRTAP19-2Q3LHN2 52 aa4.04□□□□□ -1.76
RPL27A-201ENST00000314138 KRTAP4-8A0A0G2JLE6 195 aa4.04□□□□□ -1.76
RPL27A-201ENST00000314138 KRTAP4-8Q9BYQ9 185 aa4.04□□□□□ -1.76
RPL27A-201ENST00000314138 MUC2Q02817 5179 aa4.02□□□□□ -1.77
RPL27A-201ENST00000314138 RNF213Q63HN8 5207 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms