RNA–Protein interactions for RNA: ENST00000313219.8

CHMP7-201, Transcript of charged multivesicular body protein 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP7, Length 3,367 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-201ENST00000313219 C10orf95Q9H7T3 257 aa7.47□□□□□ -1.21
CHMP7-201ENST00000313219 H1FX-AS1Q4G0G2 97 aa7.43□□□□□ -1.22
CHMP7-201ENST00000313219 RPS29P62273 56 aaKnown RBP7.4□□□□□ -1.22
CHMP7-201ENST00000313219 Q5VSD8 79 aa7.39□□□□□ -1.23
CHMP7-201ENST00000313219 PKHD1L1Q86WI1 4243 aa7.38□□□□□ -1.23
CHMP7-201ENST00000313219 KIAA1109Q2LD37 5005 aa7.35□□□□□ -1.23
CHMP7-201ENST00000313219 HSPG2P98160 4391 aa7.34□□□□□ -1.23
CHMP7-201ENST00000313219 MYCBP2O75592 4640 aa7.33□□□□□ -1.24
CHMP7-201ENST00000313219 COX6B2Q6YFQ2 88 aa7.33□□□□□ -1.24
CHMP7-201ENST00000313219 KRTAP17-1Q9BYP8 105 aa7.33□□□□□ -1.24
CHMP7-201ENST00000313219 C20orf166-AS1Q96NR2 134 aa7.3□□□□□ -1.24
CHMP7-201ENST00000313219 RYR1P21817 5038 aa7.29□□□□□ -1.24
CHMP7-201ENST00000313219 EPPK1P58107 5090 aaKnown RBP7.27□□□□□ -1.25
CHMP7-201ENST00000313219 TPRXLQ17RH7 258 aa7.26□□□□□ -1.25
CHMP7-201ENST00000313219 FAT3Q8TDW7 4589 aa7.26□□□□□ -1.25
CHMP7-201ENST00000313219 TNXBP22105 4242 aa7.24□□□□□ -1.25
CHMP7-201ENST00000313219 KRTAP10-8P60410 259 aa7.24□□□□□ -1.25
CHMP7-201ENST00000313219 RPL37P61927 97 aaKnown RBP7.24□□□□□ -1.25
CHMP7-201ENST00000313219 KRTAP3-1Q9BYR8 98 aa7.21□□□□□ -1.26
CHMP7-201ENST00000313219 A0A0A0MQY5 61 aa7.19□□□□□ -1.26
CHMP7-201ENST00000313219 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
CHMP7-201ENST00000313219 XP32Q5T750 250 aa7.1□□□□□ -1.27
CHMP7-201ENST00000313219 MT1HL1P0DM35 61 aa7.1□□□□□ -1.27
CHMP7-201ENST00000313219 KRTAP4-5Q9BYR2 181 aa7.05□□□□□ -1.28
CHMP7-201ENST00000313219 KRTAP15-1Q3LI76 137 aa7.01□□□□□ -1.29
CHMP7-201ENST00000313219 LRP2P98164 4655 aa7□□□□□ -1.29
CHMP7-201ENST00000313219 S4R3F8 94 aa7□□□□□ -1.29
CHMP7-201ENST00000313219 LPAP08519 4548 aa6.99□□□□□ -1.29
CHMP7-201ENST00000313219 ABCA13Q86UQ4 5058 aa6.97□□□□□ -1.29
CHMP7-201ENST00000313219 LUZP6Q538Z0 58 aa6.97□□□□□ -1.29
CHMP7-201ENST00000313219 KRTAP12-2P59991 146 aa6.96□□□□□ -1.3
CHMP7-201ENST00000313219 KRTAP10-6P60371 365 aaPredicted RBP6.94□□□□□ -1.3
CHMP7-201ENST00000313219 KRTAP3-3Q9BYR6 98 aa6.88□□□□□ -1.31
CHMP7-201ENST00000313219 HERC2O95714 4834 aa6.84□□□□□ -1.31
CHMP7-201ENST00000313219 BIRC6Q9NR09 4857 aa6.83□□□□□ -1.32
CHMP7-201ENST00000313219 J3QL48 77 aa6.81□□□□□ -1.32
CHMP7-201ENST00000313219 KRTAP3-2Q9BYR7 98 aa6.8□□□□□ -1.32
CHMP7-201ENST00000313219 KRTAP12-1P59990 96 aa6.76□□□□□ -1.33
CHMP7-201ENST00000313219 PLAC4Q8WY50 150 aa6.71□□□□□ -1.34
CHMP7-201ENST00000313219 PCLOQ9Y6V0 5065 aa6.69□□□□□ -1.34
CHMP7-201ENST00000313219 M0QZ58 72 aa6.68□□□□□ -1.34
CHMP7-201ENST00000313219 HERC1Q15751 4861 aa6.64□□□□□ -1.35
CHMP7-201ENST00000313219 KRTAP4-1Q9BYQ7 146 aa6.63□□□□□ -1.35
CHMP7-201ENST00000313219 SEC61BP60468 96 aaKnown RBP6.62□□□□□ -1.35
CHMP7-201ENST00000313219 R4GN34 69 aa6.61□□□□□ -1.35
CHMP7-201ENST00000313219 MUC2Q02817 5179 aa6.59□□□□□ -1.35
CHMP7-201ENST00000313219 MUC17Q685J3 4493 aa6.53□□□□□ -1.36
CHMP7-201ENST00000313219 CAMK2N1Q7Z7J9 78 aa6.48□□□□□ -1.37
CHMP7-201ENST00000313219 LORP23490 312 aaPredicted RBP6.42□□□□□ -1.38
CHMP7-201ENST00000313219 KRTAP19-2Q3LHN2 52 aa6.34□□□□□ -1.39
CHMP7-201ENST00000313219 HMCN2Q8NDA2 5059 aa6.33□□□□□ -1.4
CHMP7-201ENST00000313219 RNF213Q63HN8 5207 aa6.31□□□□□ -1.4
CHMP7-201ENST00000313219 UBR4Q5T4S7 5183 aa6.3□□□□□ -1.4
CHMP7-201ENST00000313219 FAT4Q6V0I7 4981 aa6.3□□□□□ -1.4
CHMP7-201ENST00000313219 FLGP20930 4061 aaPredicted RBP6.21□□□□□ -1.42
CHMP7-201ENST00000313219 M0R2T5 61 aa6.13□□□□□ -1.43
CHMP7-201ENST00000313219 PP632Q6XCG6 107 aa6.09□□□□□ -1.44
CHMP7-201ENST00000313219 LCE2CQ5TA81 110 aa6.08□□□□□ -1.44
CHMP7-201ENST00000313219 TNP1P09430 55 aa6.03□□□□□ -1.44
CHMP7-201ENST00000313219 LCE2DQ5TA82 110 aaPredicted RBP5.97□□□□□ -1.45
CHMP7-201ENST00000313219 MT1HP80294 61 aa5.96□□□□□ -1.46
CHMP7-201ENST00000313219 KRTAP10-10P60014 251 aa5.9□□□□□ -1.46
CHMP7-201ENST00000313219 MT1FP04733 61 aa5.85□□□□□ -1.47
CHMP7-201ENST00000313219 KRTAP19-1Q8IUB9 90 aa5.85□□□□□ -1.47
CHMP7-201ENST00000313219 MT2AP02795 61 aa5.83□□□□□ -1.48
CHMP7-201ENST00000313219 SPRR2GQ9BYE4 73 aa5.79□□□□□ -1.48
CHMP7-201ENST00000313219 PRO2289Q9P1D8 64 aa5.79□□□□□ -1.48
CHMP7-201ENST00000313219 KRTAP9-8Q9BYQ0 159 aa5.78□□□□□ -1.48
CHMP7-201ENST00000313219 LCE3AQ5TA76 89 aa5.65□□□□□ -1.51
CHMP7-201ENST00000313219 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
CHMP7-201ENST00000313219 MT1BP07438 61 aa5.57□□□□□ -1.52
CHMP7-201ENST00000313219 KRTAP19-8Q3LI54 63 aa5.55□□□□□ -1.52
CHMP7-201ENST00000313219 KRTAP9-3Q9BYQ3 159 aa5.53□□□□□ -1.52
CHMP7-201ENST00000313219 FSIP2Q5CZC0 6907 aa5.53□□□□□ -1.52
CHMP7-201ENST00000313219 INE1O15225 51 aa5.53□□□□□ -1.52
CHMP7-201ENST00000313219 USH2AO75445 5202 aa5.52□□□□□ -1.53
CHMP7-201ENST00000313219 MT1XP80297 61 aa5.49□□□□□ -1.53
CHMP7-201ENST00000313219 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
CHMP7-201ENST00000313219 LCE2BO14633 110 aa5.46□□□□□ -1.54
CHMP7-201ENST00000313219 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
CHMP7-201ENST00000313219 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
CHMP7-201ENST00000313219 KRTAP10-12P60413 245 aa5.35□□□□□ -1.55
CHMP7-201ENST00000313219 LCE2AQ5TA79 106 aaPredicted RBP5.34□□□□□ -1.55
CHMP7-201ENST00000313219 KMT2DO14686 5537 aa5.33□□□□□ -1.56
CHMP7-201ENST00000313219 KRTAP12-3P60328 96 aa5.32□□□□□ -1.56
CHMP7-201ENST00000313219 KRTAP8-1Q8IUC2 63 aa5.27□□□□□ -1.57
CHMP7-201ENST00000313219 KRTAP4-8A0A0G2JLE6 195 aa5.16□□□□□ -1.58
CHMP7-201ENST00000313219 KRTAP4-8Q9BYQ9 185 aa5.16□□□□□ -1.58
CHMP7-201ENST00000313219 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
CHMP7-201ENST00000313219 SSPOA2VEC9 5147 aa5.06□□□□□ -1.6
CHMP7-201ENST00000313219 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
CHMP7-201ENST00000313219 DSTQ03001 7570 aaKnown RBP4.94□□□□□ -1.62
CHMP7-201ENST00000313219 LCE3CQ5T5A8 94 aa4.91□□□□□ -1.62
CHMP7-201ENST00000313219 KRTAP4-7Q9BYR0 210 aa4.9□□□□□ -1.62
CHMP7-201ENST00000313219 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
CHMP7-201ENST00000313219 KRTAP9-6A8MVA2 160 aa4.85□□□□□ -1.63
CHMP7-201ENST00000313219 KRTAP9-2Q9BYQ4 174 aa4.83□□□□□ -1.64
CHMP7-201ENST00000313219 FCGBPQ9Y6R7 5405 aaPredicted RBP4.83□□□□□ -1.64
CHMP7-201ENST00000313219 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
CHMP7-201ENST00000313219 KRTAP19-6Q3LI70 58 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms