RNA–Protein interactions for RNA: ENST00000313219.8

CHMP7-201, Transcript of charged multivesicular body protein 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP7, Length 3,367 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-201ENST00000313219 NISCHQ9Y2I1 1504 aa28.59■■■□□ 2.17
CHMP7-201ENST00000313219 SHROOM4Q9ULL8 1493 aa24.58■■□□□ 1.53
CHMP7-201ENST00000313219 DCAF8L2P0C7V8 631 aa24.34■■□□□ 1.49
CHMP7-201ENST00000313219 CCDC180Q9P1Z9 1646 aa24.24■■□□□ 1.47
CHMP7-201ENST00000313219 ZCCHC6Q5VYS8 1495 aaKnown RBP24.08■■□□□ 1.44
CHMP7-201ENST00000313219 SUPT5HO00267 1087 aaKnown RBP23.99■■□□□ 1.43
CHMP7-201ENST00000313219 DCAF1Q9Y4B6 1507 aa23.26■■□□□ 1.31
CHMP7-201ENST00000313219 ABCC9O60706 1549 aa23.15■■□□□ 1.3
CHMP7-201ENST00000313219 SCRIBQ14160 1630 aa22.99■■□□□ 1.27
CHMP7-201ENST00000313219 CHIC1Q5VXU3 224 aa22.97■■□□□ 1.27
CHMP7-201ENST00000313219 MYO15BQ96JP2 1530 aa22.75■■□□□ 1.23
CHMP7-201ENST00000313219 PPARGC1BQ86YN6 1023 aaKnown RBP22.7■■□□□ 1.22
CHMP7-201ENST00000313219 NACADO15069 1562 aa22.59■■□□□ 1.21
CHMP7-201ENST00000313219 HRCP23327 699 aa22.59■■□□□ 1.21
CHMP7-201ENST00000313219 RSF1Q96T23 1441 aaPredicted RBP22.59■■□□□ 1.21
CHMP7-201ENST00000313219 PCGF6Q9BYE7 350 aa22.55■■□□□ 1.2
CHMP7-201ENST00000313219 CECR2Q9BXF3 1484 aa22.47■■□□□ 1.19
CHMP7-201ENST00000313219 LOC105371045A0A1W2PR82 267 aa22.44■■□□□ 1.18
CHMP7-201ENST00000313219 RB1CC1Q8TDY2 1594 aa22.34■■□□□ 1.17
CHMP7-201ENST00000313219 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
CHMP7-201ENST00000313219 FAM9AQ8IZU1 332 aaPredicted RBP22.25■■□□□ 1.15
CHMP7-201ENST00000313219 TRIM41Q8WV44 630 aa22.24■■□□□ 1.15
CHMP7-201ENST00000313219 PABPN1Q86U42 306 aaKnown RBP eCLIP22.22■■□□□ 1.15
CHMP7-201ENST00000313219 EHMT2Q96KQ7 1210 aa22.22■■□□□ 1.15
CHMP7-201ENST00000313219 WIZO95785 1651 aa22.14■■□□□ 1.13
CHMP7-201ENST00000313219 PELP1Q8IZL8 1130 aaKnown RBP22.09■■□□□ 1.13
CHMP7-201ENST00000313219 BAZ1AQ9NRL2 1556 aaPredicted RBP21.95■■□□□ 1.11
CHMP7-201ENST00000313219 UNC13AQ9UPW8 1703 aa21.92■■□□□ 1.1
CHMP7-201ENST00000313219 SMARCA4P51532 1647 aa21.81■■□□□ 1.08
CHMP7-201ENST00000313219 BICRAQ9NZM4 1560 aa21.74■■□□□ 1.07
CHMP7-201ENST00000313219 SCAF1Q9H7N4 1312 aaKnown RBP21.74■■□□□ 1.07
CHMP7-201ENST00000313219 CCDC88BA6NC98 1476 aa21.72■■□□□ 1.07
CHMP7-201ENST00000313219 TOP2AP11388 1531 aaKnown RBP21.7■■□□□ 1.06
CHMP7-201ENST00000313219 ABCC8Q09428 1581 aa21.62■■□□□ 1.05
CHMP7-201ENST00000313219 SMARCA2P51531 1590 aa21.59■■□□□ 1.05
CHMP7-201ENST00000313219 TRIM26Q12899 539 aaPredicted RBP21.57■■□□□ 1.04
CHMP7-201ENST00000313219 EIF4G1Q04637 1599 aaKnown RBP21.51■■□□□ 1.03
CHMP7-201ENST00000313219 ATAD2BQ9ULI0 1458 aa21.4■■□□□ 1.02
CHMP7-201ENST00000313219 SOGA1O94964 1423 aa21.39■■□□□ 1.02
CHMP7-201ENST00000313219 TTBK1Q5TCY1 1321 aaPredicted RBP21.39■■□□□ 1.01
CHMP7-201ENST00000313219 BAZ1BQ9UIG0 1483 aaKnown RBP21.36■■□□□ 1.01
CHMP7-201ENST00000313219 RUSC2Q8N2Y8 1516 aa21.31■■□□□ 1
CHMP7-201ENST00000313219 UBTFP17480 764 aaKnown RBP21.31■■□□□ 1
CHMP7-201ENST00000313219 CSRNP3Q8WYN3 585 aa21.27■□□□□ 0.99
CHMP7-201ENST00000313219 PEG3Q9GZU2 1588 aa21.26■□□□□ 0.99
CHMP7-201ENST00000313219 WRNQ14191 1432 aaPredicted RBP eCLIP21.26■□□□□ 0.99
CHMP7-201ENST00000313219 MYT1Q01538 1121 aa21.2■□□□□ 0.98
CHMP7-201ENST00000313219 RANGAP1P46060 587 aaPredicted RBP21.17■□□□□ 0.98
CHMP7-201ENST00000313219 GTF3C3Q9Y5Q9 886 aa21.17■□□□□ 0.98
CHMP7-201ENST00000313219 NEUROD1Q13562 356 aa21.13■□□□□ 0.97
CHMP7-201ENST00000313219 CEP162Q5TB80 1403 aa21.1■□□□□ 0.97
CHMP7-201ENST00000313219 SYNJ1O43426 1573 aa21.1■□□□□ 0.97
CHMP7-201ENST00000313219 ACIN1Q9UKV3 1341 aaKnown RBP21.03■□□□□ 0.96
CHMP7-201ENST00000313219 TNIKQ9UKE5 1360 aa21.03■□□□□ 0.96
CHMP7-201ENST00000313219 EEA1Q15075 1411 aa21.02■□□□□ 0.96
CHMP7-201ENST00000313219 YTHDC1Q96MU7 727 aaKnown RBP21.01■□□□□ 0.95
CHMP7-201ENST00000313219 ZEB1P37275 1124 aaPredicted RBP21■□□□□ 0.95
CHMP7-201ENST00000313219 NCAPD3P42695 1498 aa20.97■□□□□ 0.95
CHMP7-201ENST00000313219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.97■□□□□ 0.95
CHMP7-201ENST00000313219 GOLGA3Q08378 1498 aa20.96■□□□□ 0.95
CHMP7-201ENST00000313219 CENPBP07199 599 aaPredicted RBP20.89■□□□□ 0.93
CHMP7-201ENST00000313219 CEP164Q9UPV0 1460 aa20.86■□□□□ 0.93
CHMP7-201ENST00000313219 HMGXB3Q12766 1538 aa20.86■□□□□ 0.93
CHMP7-201ENST00000313219 CCER1Q8TC90 406 aaPredicted RBP20.86■□□□□ 0.93
CHMP7-201ENST00000313219 RAPGEF2Q9Y4G8 1499 aa20.84■□□□□ 0.93
CHMP7-201ENST00000313219 CLIP1P30622 1438 aa20.8■□□□□ 0.92
CHMP7-201ENST00000313219 TOP2BQ02880 1626 aa20.78■□□□□ 0.92
CHMP7-201ENST00000313219 CUX1P39880 1505 aa20.74■□□□□ 0.91
CHMP7-201ENST00000313219 CFTRP13569 1480 aa20.74■□□□□ 0.91
CHMP7-201ENST00000313219 APLP2Q06481 763 aa20.72■□□□□ 0.91
CHMP7-201ENST00000313219 KIF21BO75037 1637 aa20.71■□□□□ 0.91
CHMP7-201ENST00000313219 HNRNPUL2Q1KMD3 747 aaKnown RBP20.7■□□□□ 0.9
CHMP7-201ENST00000313219 DIEXFQ68CQ4 756 aaKnown RBP20.69■□□□□ 0.9
CHMP7-201ENST00000313219 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
CHMP7-201ENST00000313219 CADPSQ9ULU8 1353 aa20.65■□□□□ 0.9
CHMP7-201ENST00000313219 BIVM-ERCC5R4GMW8 1640 aa20.65■□□□□ 0.9
CHMP7-201ENST00000313219 KIF27Q86VH2 1401 aa20.62■□□□□ 0.89
CHMP7-201ENST00000313219 VPS8Q8N3P4 1428 aa20.59■□□□□ 0.89
CHMP7-201ENST00000313219 CUX2O14529 1486 aa20.56■□□□□ 0.88
CHMP7-201ENST00000313219 PRXQ9BXM0 1461 aa20.56■□□□□ 0.88
CHMP7-201ENST00000313219 DNAJC5BQ9UF47 199 aa20.54■□□□□ 0.88
CHMP7-201ENST00000313219 NESP48681 1621 aa20.51■□□□□ 0.87
CHMP7-201ENST00000313219 FGD5Q6ZNL6 1462 aa20.47■□□□□ 0.87
CHMP7-201ENST00000313219 FANCD2Q9BXW9 1451 aa20.46■□□□□ 0.87
CHMP7-201ENST00000313219 KANK4Q5T7N3 995 aaPredicted RBP20.46■□□□□ 0.87
CHMP7-201ENST00000313219 IGF1RP08069 1367 aa20.45■□□□□ 0.86
CHMP7-201ENST00000313219 P3H3Q8IVL6 736 aa20.43■□□□□ 0.86
CHMP7-201ENST00000313219 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
CHMP7-201ENST00000313219 ARAP1Q96P48 1450 aa20.41■□□□□ 0.86
CHMP7-201ENST00000313219 CARMIL1Q5VZK9 1371 aa20.39■□□□□ 0.85
CHMP7-201ENST00000313219 RAD54L2Q9Y4B4 1467 aa20.39■□□□□ 0.85
CHMP7-201ENST00000313219 ATP1B4Q9UN42 357 aaPredicted RBP20.39■□□□□ 0.85
CHMP7-201ENST00000313219 ITGAEP38570 1179 aa20.35■□□□□ 0.85
CHMP7-201ENST00000313219 BCL11AQ9H165 835 aa20.33■□□□□ 0.85
CHMP7-201ENST00000313219 PRDM2Q13029 1718 aa20.32■□□□□ 0.84
CHMP7-201ENST00000313219 ARHGAP35Q9NRY4 1499 aa20.31■□□□□ 0.84
CHMP7-201ENST00000313219 TOPBP1Q92547 1522 aa20.26■□□□□ 0.83
CHMP7-201ENST00000313219 POLA1P09884 1462 aaPredicted RBP20.25■□□□□ 0.83
CHMP7-201ENST00000313219 TDRD9Q8NDG6 1382 aaKnown RBP20.23■□□□□ 0.83
CHMP7-201ENST00000313219 DNMBPQ6XZF7 1577 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms