RNA–Protein interactions for RNA: ENST00000311559.13

CYLD-201, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 5 BASIC

Gene CYLD, Length 5,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-201ENST00000311559 KRTAP11-1Q8IUC1 163 aa3.51□□□□□ -1.85
CYLD-201ENST00000311559 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
CYLD-201ENST00000311559 TNP1P09430 55 aa3.49□□□□□ -1.85
CYLD-201ENST00000311559 KRTAP13-1Q8IUC0 172 aa3.49□□□□□ -1.85
CYLD-201ENST00000311559 NBEAL2Q6ZNJ1 2754 aa3.48□□□□□ -1.85
CYLD-201ENST00000311559 HERC1Q15751 4861 aa3.48□□□□□ -1.85
CYLD-201ENST00000311559 PKHD1L1Q86WI1 4243 aa3.47□□□□□ -1.85
CYLD-201ENST00000311559 Q6ZRN7 208 aaPredicted RBP3.46□□□□□ -1.86
CYLD-201ENST00000311559 KRTAP7-1Q8IUC3 87 aa3.46□□□□□ -1.86
CYLD-201ENST00000311559 KRTAP13-2Q52LG2 175 aa3.43□□□□□ -1.86
CYLD-201ENST00000311559 C10orf95Q9H7T3 257 aa3.43□□□□□ -1.86
CYLD-201ENST00000311559 STAB2Q8WWQ8 2551 aa3.42□□□□□ -1.86
CYLD-201ENST00000311559 TEP1Q99973 2627 aaKnown RBP3.42□□□□□ -1.86
CYLD-201ENST00000311559 TENM3Q9P273 2699 aa3.42□□□□□ -1.86
CYLD-201ENST00000311559 MUC2Q02817 5179 aa3.41□□□□□ -1.86
CYLD-201ENST00000311559 NOTCH1P46531 2555 aa3.38□□□□□ -1.87
CYLD-201ENST00000311559 P0C880 135 aa3.37□□□□□ -1.87
CYLD-201ENST00000311559 LPAP08519 4548 aa3.36□□□□□ -1.87
CYLD-201ENST00000311559 COL6A5A8TX70 2615 aa3.35□□□□□ -1.87
CYLD-201ENST00000311559 KRTAP21-3Q3LHN1 58 aa3.34□□□□□ -1.87
CYLD-201ENST00000311559 APOBP04114 4563 aaKnown RBP3.34□□□□□ -1.87
CYLD-201ENST00000311559 H0YAA0 97 aa3.34□□□□□ -1.88
CYLD-201ENST00000311559 LRP1BQ9NZR2 4599 aa3.33□□□□□ -1.88
CYLD-201ENST00000311559 KIAA1109Q2LD37 5005 aa3.31□□□□□ -1.88
CYLD-201ENST00000311559 RNF213Q63HN8 5207 aa3.29□□□□□ -1.88
CYLD-201ENST00000311559 KRTAP10-8P60410 259 aa3.29□□□□□ -1.88
CYLD-201ENST00000311559 XP32Q5T750 250 aa3.27□□□□□ -1.89
CYLD-201ENST00000311559 HERC2O95714 4834 aa3.26□□□□□ -1.89
CYLD-201ENST00000311559 PRO2289Q9P1D8 64 aa3.26□□□□□ -1.89
CYLD-201ENST00000311559 LRP1Q07954 4544 aaKnown RBP3.26□□□□□ -1.89
CYLD-201ENST00000311559 TPRXLQ17RH7 258 aa3.25□□□□□ -1.89
CYLD-201ENST00000311559 KRTAP1-4P0C5Y4 121 aa3.25□□□□□ -1.89
CYLD-201ENST00000311559 TNXBP22105 4242 aa3.24□□□□□ -1.89
CYLD-201ENST00000311559 UBR4Q5T4S7 5183 aa3.22□□□□□ -1.89
CYLD-201ENST00000311559 FAT1Q14517 4588 aa3.21□□□□□ -1.9
CYLD-201ENST00000311559 DYNC1H1Q14204 4646 aaKnown RBP3.21□□□□□ -1.9
CYLD-201ENST00000311559 KRTAP10-10P60014 251 aa3.18□□□□□ -1.9
CYLD-201ENST00000311559 KRTAP3-3Q9BYR6 98 aa3.17□□□□□ -1.9
CYLD-201ENST00000311559 KRTAP3-2Q9BYR7 98 aa3.17□□□□□ -1.9
CYLD-201ENST00000311559 KRTAP13-3Q3SY46 172 aa3.16□□□□□ -1.9
CYLD-201ENST00000311559 A0A1B0GVY2 172 aa3.16□□□□□ -1.9
CYLD-201ENST00000311559 BIRC6Q9NR09 4857 aa3.16□□□□□ -1.9
CYLD-201ENST00000311559 FAT4Q6V0I7 4981 aa3.15□□□□□ -1.91
CYLD-201ENST00000311559 HMCN2Q8NDA2 5059 aa3.14□□□□□ -1.91
CYLD-201ENST00000311559 SRRM2Q9UQ35 2752 aaKnown RBP3.13□□□□□ -1.91
CYLD-201ENST00000311559 KRTAP13-4Q3LI77 160 aa3.13□□□□□ -1.91
CYLD-201ENST00000311559 KRTAP12-2P59991 146 aa3.1□□□□□ -1.91
CYLD-201ENST00000311559 KRTAP17-1Q9BYP8 105 aa3.08□□□□□ -1.92
CYLD-201ENST00000311559 KRTAP12-1P59990 96 aa3.06□□□□□ -1.92
CYLD-201ENST00000311559 LCE2BO14633 110 aa3.04□□□□□ -1.92
CYLD-201ENST00000311559 INE1O15225 51 aa3.04□□□□□ -1.92
CYLD-201ENST00000311559 FLGP20930 4061 aaPredicted RBP3.01□□□□□ -1.93
CYLD-201ENST00000311559 LRP2P98164 4655 aa2.97□□□□□ -1.93
CYLD-201ENST00000311559 KRTAP15-1Q3LI76 137 aa2.97□□□□□ -1.93
CYLD-201ENST00000311559 KRTAP3-1Q9BYR8 98 aa2.97□□□□□ -1.93
CYLD-201ENST00000311559 KRTAP10-6P60371 365 aaPredicted RBP2.93□□□□□ -1.94
CYLD-201ENST00000311559 MUC17Q685J3 4493 aa2.93□□□□□ -1.94
CYLD-201ENST00000311559 LOC100996750A0A140TA64 210 aa2.88□□□□□ -1.95
CYLD-201ENST00000311559 KRTAP4-6Q9BYQ5 205 aa2.88□□□□□ -1.95
CYLD-201ENST00000311559 KRTAP23-1A1A580 65 aa2.86□□□□□ -1.95
CYLD-201ENST00000311559 LCE2AQ5TA79 106 aaPredicted RBP2.83□□□□□ -1.96
CYLD-201ENST00000311559 USH2AO75445 5202 aa2.81□□□□□ -1.96
CYLD-201ENST00000311559 KRTAP10-12P60413 245 aa2.78□□□□□ -1.96
CYLD-201ENST00000311559 KRTAP12-3P60328 96 aa2.73□□□□□ -1.97
CYLD-201ENST00000311559 MT1HL1P0DM35 61 aa2.71□□□□□ -1.98
CYLD-201ENST00000311559 LCE2CQ5TA81 110 aa2.7□□□□□ -1.98
CYLD-201ENST00000311559 LCE3AQ5TA76 89 aa2.66□□□□□ -1.98
CYLD-201ENST00000311559 CRCT1Q9UGL9 99 aa2.66□□□□□ -1.98
CYLD-201ENST00000311559 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.64□□□□□ -1.99
CYLD-201ENST00000311559 KRTAP10-4P60372 401 aaPredicted RBP2.6□□□□□ -1.99
CYLD-201ENST00000311559 LORP23490 312 aaPredicted RBP2.58□□□□□ -2
CYLD-201ENST00000311559 KRTAP10-5P60370 271 aa2.56□□□□□ -2
CYLD-201ENST00000311559 SSPOA2VEC9 5147 aa2.56□□□□□ -2
CYLD-201ENST00000311559 KRTAP9-2Q9BYQ4 174 aa2.56□□□□□ -2
CYLD-201ENST00000311559 KRTAP8-1Q8IUC2 63 aa2.55□□□□□ -2
CYLD-201ENST00000311559 KRTAP4-8Q9BYQ9 185 aa2.54□□□□□ -2
CYLD-201ENST00000311559 KRTAP9-6A0A140TA67 174 aa2.51□□□□□ -2.01
CYLD-201ENST00000311559 KRTAP19-4Q3LI73 84 aa2.5□□□□□ -2.01
CYLD-201ENST00000311559 KRTAP4-5Q9BYR2 181 aa2.48□□□□□ -2.01
CYLD-201ENST00000311559 KRTAP9-9Q9BYP9 154 aa2.45□□□□□ -2.02
CYLD-201ENST00000311559 KRTAP9-4Q9BYQ2 154 aa2.45□□□□□ -2.02
CYLD-201ENST00000311559 KMT2DO14686 5537 aa2.43□□□□□ -2.02
CYLD-201ENST00000311559 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
CYLD-201ENST00000311559 SPRR2GQ9BYE4 73 aa2.42□□□□□ -2.02
CYLD-201ENST00000311559 KRTAP10-7P60409 375 aaPredicted RBP2.39□□□□□ -2.03
CYLD-201ENST00000311559 LCE3CQ5T5A8 94 aa2.39□□□□□ -2.03
CYLD-201ENST00000311559 FSIP2Q5CZC0 6907 aa2.38□□□□□ -2.03
CYLD-201ENST00000311559 MUC12Q9UKN1 5478 aa2.38□□□□□ -2.03
CYLD-201ENST00000311559 MT1HP80294 61 aa2.37□□□□□ -2.03
CYLD-201ENST00000311559 MT2AP02795 61 aa2.37□□□□□ -2.03
CYLD-201ENST00000311559 MDN1Q9NU22 5596 aa2.35□□□□□ -2.03
CYLD-201ENST00000311559 KRTAP19-5Q3LI72 72 aa2.34□□□□□ -2.03
CYLD-201ENST00000311559 KRTAP4-8A0A0G2JLE6 195 aa2.33□□□□□ -2.04
CYLD-201ENST00000311559 KRTAP19-1Q8IUB9 90 aa2.33□□□□□ -2.04
CYLD-201ENST00000311559 KRTAP4-1Q9BYQ7 146 aa2.32□□□□□ -2.04
CYLD-201ENST00000311559 KRTAP19-2Q3LHN2 52 aa2.32□□□□□ -2.04
CYLD-201ENST00000311559 SPRR2FQ96RM1 72 aa2.32□□□□□ -2.04
CYLD-201ENST00000311559 FCGBPQ9Y6R7 5405 aaPredicted RBP2.31□□□□□ -2.04
CYLD-201ENST00000311559 KRTAP4-2Q9BYR5 136 aa2.29□□□□□ -2.04
CYLD-201ENST00000311559 MT1FP04733 61 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms