RNA–Protein interactions for RNA: ENST00000311559.13

CYLD-201, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 5 BASIC

Gene CYLD, Length 5,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-201ENST00000311559 DCAF8L2P0C7V8 631 aa10.28□□□□□ -0.76
CYLD-201ENST00000311559 PELP1Q8IZL8 1130 aaKnown RBP10.16□□□□□ -0.78
CYLD-201ENST00000311559 NISCHQ9Y2I1 1504 aa9.87□□□□□ -0.83
CYLD-201ENST00000311559 SUPT5HO00267 1087 aaKnown RBP9.81□□□□□ -0.84
CYLD-201ENST00000311559 MYT1Q01538 1121 aa9.79□□□□□ -0.84
CYLD-201ENST00000311559 CCER1Q8TC90 406 aaPredicted RBP9.68□□□□□ -0.86
CYLD-201ENST00000311559 APLP2Q06481 763 aa9.64□□□□□ -0.87
CYLD-201ENST00000311559 CENPBP07199 599 aaPredicted RBP9.64□□□□□ -0.87
CYLD-201ENST00000311559 ERICH6Q7L0X2 663 aa9.64□□□□□ -0.87
CYLD-201ENST00000311559 ZEB1P37275 1124 aaPredicted RBP9.59□□□□□ -0.87
CYLD-201ENST00000311559 FAM9AQ8IZU1 332 aaPredicted RBP9.58□□□□□ -0.88
CYLD-201ENST00000311559 SHROOM4Q9ULL8 1493 aa9.46□□□□□ -0.9
CYLD-201ENST00000311559 PCGF6Q9BYE7 350 aa9.43□□□□□ -0.9
CYLD-201ENST00000311559 EHMT2Q96KQ7 1210 aa9.42□□□□□ -0.9
CYLD-201ENST00000311559 NEFLP07196 543 aa9.39□□□□□ -0.91
CYLD-201ENST00000311559 YTHDC1Q96MU7 727 aaKnown RBP9.24□□□□□ -0.93
CYLD-201ENST00000311559 TTBK1Q5TCY1 1321 aaPredicted RBP9.19□□□□□ -0.94
CYLD-201ENST00000311559 TRIM41Q8WV44 630 aa9.16□□□□□ -0.94
CYLD-201ENST00000311559 DAXXQ9UER7 740 aaPredicted RBP9.16□□□□□ -0.94
CYLD-201ENST00000311559 ATP1B4Q9UN42 357 aaPredicted RBP9.1□□□□□ -0.95
CYLD-201ENST00000311559 TRIM26Q12899 539 aaPredicted RBP9.1□□□□□ -0.95
CYLD-201ENST00000311559 UBTFP17480 764 aaKnown RBP9.08□□□□□ -0.96
CYLD-201ENST00000311559 HRCP23327 699 aa9.07□□□□□ -0.96
CYLD-201ENST00000311559 RANGAP1P46060 587 aaPredicted RBP9.05□□□□□ -0.96
CYLD-201ENST00000311559 RTL5Q5HYW3 569 aaPredicted RBP9.01□□□□□ -0.97
CYLD-201ENST00000311559 ZNF316A6NFI3 1004 aaPredicted RBP8.92□□□□□ -0.98
CYLD-201ENST00000311559 DIEXFQ68CQ4 756 aaKnown RBP8.84□□□□□ -0.99
CYLD-201ENST00000311559 MYT1LQ9UL68 1186 aa8.83□□□□□ -1
CYLD-201ENST00000311559 CLSPNQ9HAW4 1339 aa8.82□□□□□ -1
CYLD-201ENST00000311559 PPARGC1BQ86YN6 1023 aaKnown RBP8.81□□□□□ -1
CYLD-201ENST00000311559 POLR3GLQ9BT43 218 aa8.81□□□□□ -1
CYLD-201ENST00000311559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.79□□□□□ -1
CYLD-201ENST00000311559 HNRNPUL2Q1KMD3 747 aaKnown RBP8.79□□□□□ -1
CYLD-201ENST00000311559 CDK11AQ9UQ88 783 aaPredicted RBP8.77□□□□□ -1.01
CYLD-201ENST00000311559 ITGAEP38570 1179 aa8.75□□□□□ -1.01
CYLD-201ENST00000311559 UNC13AQ9UPW8 1703 aa8.73□□□□□ -1.01
CYLD-201ENST00000311559 GTF3C3Q9Y5Q9 886 aa8.72□□□□□ -1.01
CYLD-201ENST00000311559 CHIC1Q5VXU3 224 aa8.71□□□□□ -1.02
CYLD-201ENST00000311559 SLC4A1APQ9BWU0 796 aaKnown RBP8.68□□□□□ -1.02
CYLD-201ENST00000311559 ANP32CO43423 234 aa8.68□□□□□ -1.02
CYLD-201ENST00000311559 LOC105371045A0A1W2PR82 267 aa8.67□□□□□ -1.02
CYLD-201ENST00000311559 ZBTB47Q9UFB7 747 aaPredicted RBP8.66□□□□□ -1.02
CYLD-201ENST00000311559 GLIPR1L2Q4G1C9 344 aa8.65□□□□□ -1.02
CYLD-201ENST00000311559 ANP32AP39687 249 aaKnown RBP8.65□□□□□ -1.02
CYLD-201ENST00000311559 ACIN1Q9UKV3 1341 aaKnown RBP8.63□□□□□ -1.03
CYLD-201ENST00000311559 CNGB1Q14028 1251 aaPredicted RBP8.62□□□□□ -1.03
CYLD-201ENST00000311559 BCANQ96GW7 911 aa8.61□□□□□ -1.03
CYLD-201ENST00000311559 ANP32BQ92688 251 aaKnown RBP8.59□□□□□ -1.03
CYLD-201ENST00000311559 TRIM52Q96A61 297 aa8.57□□□□□ -1.04
CYLD-201ENST00000311559 FAM50AQ14320 339 aaKnown RBP8.56□□□□□ -1.04
CYLD-201ENST00000311559 CCDC180Q9P1Z9 1646 aa8.55□□□□□ -1.04
CYLD-201ENST00000311559 NEFMP07197 916 aa8.55□□□□□ -1.04
CYLD-201ENST00000311559 CANXP27824 592 aaKnown RBP8.54□□□□□ -1.04
CYLD-201ENST00000311559 EIF5BO60841 1220 aaKnown RBP8.53□□□□□ -1.04
CYLD-201ENST00000311559 NEUROD1Q13562 356 aa8.53□□□□□ -1.04
CYLD-201ENST00000311559 UPF2Q9HAU5 1272 aaKnown RBP8.48□□□□□ -1.05
CYLD-201ENST00000311559 NPM2Q86SE8 214 aaKnown RBP8.44□□□□□ -1.06
CYLD-201ENST00000311559 ZNF326Q5BKZ1 582 aaKnown RBP8.43□□□□□ -1.06
CYLD-201ENST00000311559 HSP90AA1P07900 732 aaKnown RBP8.43□□□□□ -1.06
CYLD-201ENST00000311559 FKBP8Q14318 412 aa8.43□□□□□ -1.06
CYLD-201ENST00000311559 SLC24A1O60721 1099 aa8.39□□□□□ -1.07
CYLD-201ENST00000311559 ANP32EQ9BTT0 268 aa8.39□□□□□ -1.07
CYLD-201ENST00000311559 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.38□□□□□ -1.07
CYLD-201ENST00000311559 CCDC136Q96JN2 1154 aa8.34□□□□□ -1.07
CYLD-201ENST00000311559 HNRNPUQ00839 825 aaKnown RBP eCLIP8.34□□□□□ -1.07
CYLD-201ENST00000311559 DDRGK1Q96HY6 314 aa8.34□□□□□ -1.07
CYLD-201ENST00000311559 TNNT2P45379 298 aaPredicted RBP8.33□□□□□ -1.08
CYLD-201ENST00000311559 TONSLQ96HA7 1378 aa8.33□□□□□ -1.08
CYLD-201ENST00000311559 DCAF1Q9Y4B6 1507 aa8.32□□□□□ -1.08
CYLD-201ENST00000311559 BICRAQ9NZM4 1560 aa8.32□□□□□ -1.08
CYLD-201ENST00000311559 NBR1Q14596 966 aa8.31□□□□□ -1.08
CYLD-201ENST00000311559 BCL11AQ9H165 835 aa8.3□□□□□ -1.08
CYLD-201ENST00000311559 BECN1Q14457 450 aa8.3□□□□□ -1.08
CYLD-201ENST00000311559 ESF1Q9H501 851 aaKnown RBP8.3□□□□□ -1.08
CYLD-201ENST00000311559 CSRNP3Q8WYN3 585 aa8.29□□□□□ -1.08
CYLD-201ENST00000311559 ZCCHC6Q5VYS8 1495 aaKnown RBP8.29□□□□□ -1.08
CYLD-201ENST00000311559 FBLN2P98095 1184 aa8.29□□□□□ -1.08
CYLD-201ENST00000311559 TRIM44Q96DX7 344 aaPredicted RBP8.28□□□□□ -1.08
CYLD-201ENST00000311559 FAM9BQ8IZU0 186 aa8.26□□□□□ -1.09
CYLD-201ENST00000311559 ERICH6BQ5W0A0 696 aa8.26□□□□□ -1.09
CYLD-201ENST00000311559 GOLGA6L22H0YM25 854 aa8.26□□□□□ -1.09
CYLD-201ENST00000311559 TMC1Q8TDI8 760 aa8.26□□□□□ -1.09
CYLD-201ENST00000311559 PPM1GO15355 546 aaPredicted RBP8.25□□□□□ -1.09
CYLD-201ENST00000311559 NCLP19338 710 aaKnown RBP8.25□□□□□ -1.09
CYLD-201ENST00000311559 DDX10Q13206 875 aaKnown RBP8.25□□□□□ -1.09
CYLD-201ENST00000311559 SCAF1Q9H7N4 1312 aaKnown RBP8.24□□□□□ -1.09
CYLD-201ENST00000311559 ZNF777Q9ULD5 760 aaPredicted RBP8.23□□□□□ -1.09
CYLD-201ENST00000311559 STAG3Q9UJ98 1225 aa8.23□□□□□ -1.09
CYLD-201ENST00000311559 CDK11BP21127 795 aaKnown RBP8.23□□□□□ -1.09
CYLD-201ENST00000311559 WDR43Q15061 677 aaKnown RBP eCLIP8.23□□□□□ -1.09
CYLD-201ENST00000311559 MYH16Q9H6N6 1097 aa8.22□□□□□ -1.09
CYLD-201ENST00000311559 PABPN1Q86U42 306 aaKnown RBP eCLIP8.22□□□□□ -1.09
CYLD-201ENST00000311559 MRS2Q9HD23 443 aa8.21□□□□□ -1.1
CYLD-201ENST00000311559 NPM1P06748 294 aaKnown RBP eCLIP8.19□□□□□ -1.1
CYLD-201ENST00000311559 P3H3Q8IVL6 736 aa8.19□□□□□ -1.1
CYLD-201ENST00000311559 ARXQ96QS3 562 aa8.18□□□□□ -1.1
CYLD-201ENST00000311559 CHGAP10645 457 aaKnown RBP8.18□□□□□ -1.1
CYLD-201ENST00000311559 ABCC9O60706 1549 aa8.17□□□□□ -1.1
CYLD-201ENST00000311559 PTMAP06454 111 aaKnown RBP8.16□□□□□ -1.1
CYLD-201ENST00000311559 MIER1Q8N108 512 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms