RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 A0A0D9SG42 100 aa8.8□□□□□ -1
CCDC8-201ENST00000307522 EPPK1P58107 5090 aaKnown RBP8.78□□□□□ -1
CCDC8-201ENST00000307522 NDUFAF8A1L188 74 aa8.78□□□□□ -1
CCDC8-201ENST00000307522 FAT3Q8TDW7 4589 aa8.77□□□□□ -1.01
CCDC8-201ENST00000307522 KRTAP17-1Q9BYP8 105 aa8.75□□□□□ -1.01
CCDC8-201ENST00000307522 KRTAP3-1Q9BYR8 98 aa8.73□□□□□ -1.01
CCDC8-201ENST00000307522 HSPG2P98160 4391 aa8.71□□□□□ -1.01
CCDC8-201ENST00000307522 K7ERS5 55 aa8.71□□□□□ -1.02
CCDC8-201ENST00000307522 COX6B2Q6YFQ2 88 aa8.7□□□□□ -1.02
CCDC8-201ENST00000307522 TPRXLQ17RH7 258 aa8.69□□□□□ -1.02
CCDC8-201ENST00000307522 PKHD1L1Q86WI1 4243 aa8.69□□□□□ -1.02
CCDC8-201ENST00000307522 KRTAP10-4P60372 401 aaPredicted RBP8.67□□□□□ -1.02
CCDC8-201ENST00000307522 Q5VSD8 79 aa8.66□□□□□ -1.02
CCDC8-201ENST00000307522 RYR1P21817 5038 aa8.65□□□□□ -1.02
CCDC8-201ENST00000307522 KRTAP13-4Q3LI77 160 aa8.57□□□□□ -1.04
CCDC8-201ENST00000307522 C20orf166-AS1Q96NR2 134 aa8.54□□□□□ -1.04
CCDC8-201ENST00000307522 RPL37P61927 97 aaKnown RBP8.49□□□□□ -1.05
CCDC8-201ENST00000307522 KRTAP4-5Q9BYR2 181 aa8.47□□□□□ -1.05
CCDC8-201ENST00000307522 TNXBP22105 4242 aa8.46□□□□□ -1.06
CCDC8-201ENST00000307522 ABCA13Q86UQ4 5058 aa8.45□□□□□ -1.06
CCDC8-201ENST00000307522 LPAP08519 4548 aa8.43□□□□□ -1.06
CCDC8-201ENST00000307522 KRTAP15-1Q3LI76 137 aa8.43□□□□□ -1.06
CCDC8-201ENST00000307522 LRP2P98164 4655 aa8.39□□□□□ -1.07
CCDC8-201ENST00000307522 KRTAP10-6P60371 365 aaPredicted RBP8.38□□□□□ -1.07
CCDC8-201ENST00000307522 A0A0A0MQY5 61 aa8.33□□□□□ -1.08
CCDC8-201ENST00000307522 KRTAP12-2P59991 146 aa8.32□□□□□ -1.08
CCDC8-201ENST00000307522 KRTAP10-8P60410 259 aa8.31□□□□□ -1.08
CCDC8-201ENST00000307522 S4R3F8 94 aa8.28□□□□□ -1.08
CCDC8-201ENST00000307522 KRTAP3-3Q9BYR6 98 aa8.25□□□□□ -1.09
CCDC8-201ENST00000307522 MT1HL1P0DM35 61 aa8.25□□□□□ -1.09
CCDC8-201ENST00000307522 KRTAP3-2Q9BYR7 98 aa8.25□□□□□ -1.09
CCDC8-201ENST00000307522 RPS29P62273 56 aaKnown RBP8.24□□□□□ -1.09
CCDC8-201ENST00000307522 HERC2O95714 4834 aa8.23□□□□□ -1.09
CCDC8-201ENST00000307522 MUC2Q02817 5179 aa8.19□□□□□ -1.1
CCDC8-201ENST00000307522 XP32Q5T750 250 aa8.17□□□□□ -1.1
CCDC8-201ENST00000307522 HERC1Q15751 4861 aa8.09□□□□□ -1.11
CCDC8-201ENST00000307522 KRTAP12-1P59990 96 aa8.09□□□□□ -1.11
CCDC8-201ENST00000307522 J3QL48 77 aa8.06□□□□□ -1.12
CCDC8-201ENST00000307522 LUZP6Q538Z0 58 aa8.03□□□□□ -1.12
CCDC8-201ENST00000307522 PCLOQ9Y6V0 5065 aa7.98□□□□□ -1.13
CCDC8-201ENST00000307522 BIRC6Q9NR09 4857 aa7.89□□□□□ -1.15
CCDC8-201ENST00000307522 PLAC4Q8WY50 150 aa7.86□□□□□ -1.15
CCDC8-201ENST00000307522 RNF213Q63HN8 5207 aa7.83□□□□□ -1.16
CCDC8-201ENST00000307522 M0QZ58 72 aa7.78□□□□□ -1.16
CCDC8-201ENST00000307522 FAT4Q6V0I7 4981 aa7.78□□□□□ -1.16
CCDC8-201ENST00000307522 KRTAP4-1Q9BYQ7 146 aa7.76□□□□□ -1.17
CCDC8-201ENST00000307522 UBR4Q5T4S7 5183 aa7.69□□□□□ -1.18
CCDC8-201ENST00000307522 R4GN34 69 aa7.66□□□□□ -1.18
CCDC8-201ENST00000307522 MUC17Q685J3 4493 aa7.61□□□□□ -1.19
CCDC8-201ENST00000307522 LORP23490 312 aaPredicted RBP7.61□□□□□ -1.19
CCDC8-201ENST00000307522 SEC61BP60468 96 aaKnown RBP7.58□□□□□ -1.2
CCDC8-201ENST00000307522 HMCN2Q8NDA2 5059 aa7.56□□□□□ -1.2
CCDC8-201ENST00000307522 CAMK2N1Q7Z7J9 78 aa7.42□□□□□ -1.22
CCDC8-201ENST00000307522 KRTAP19-2Q3LHN2 52 aa7.27□□□□□ -1.25
CCDC8-201ENST00000307522 M0R2T5 61 aa7.26□□□□□ -1.25
CCDC8-201ENST00000307522 FLGP20930 4061 aaPredicted RBP7.21□□□□□ -1.26
CCDC8-201ENST00000307522 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
CCDC8-201ENST00000307522 LCE2CQ5TA81 110 aa7.07□□□□□ -1.28
CCDC8-201ENST00000307522 TNP1P09430 55 aa7.01□□□□□ -1.29
CCDC8-201ENST00000307522 MT1HP80294 61 aa6.95□□□□□ -1.3
CCDC8-201ENST00000307522 USH2AO75445 5202 aa6.92□□□□□ -1.3
CCDC8-201ENST00000307522 KRTAP10-10P60014 251 aa6.92□□□□□ -1.3
CCDC8-201ENST00000307522 SPRR5A0A1B0GTR4 108 aa6.91□□□□□ -1.3
CCDC8-201ENST00000307522 FSIP2Q5CZC0 6907 aa6.87□□□□□ -1.31
CCDC8-201ENST00000307522 MT1FP04733 61 aa6.82□□□□□ -1.32
CCDC8-201ENST00000307522 PRO2289Q9P1D8 64 aa6.82□□□□□ -1.32
CCDC8-201ENST00000307522 MT2AP02795 61 aa6.76□□□□□ -1.33
CCDC8-201ENST00000307522 LCE3AQ5TA76 89 aa6.73□□□□□ -1.33
CCDC8-201ENST00000307522 KRTAP19-1Q8IUB9 90 aa6.72□□□□□ -1.33
CCDC8-201ENST00000307522 KRTAP9-8Q9BYQ0 159 aa6.7□□□□□ -1.34
CCDC8-201ENST00000307522 KRTAP23-1A1A580 65 aa6.6□□□□□ -1.35
CCDC8-201ENST00000307522 KMT2DO14686 5537 aa6.58□□□□□ -1.36
CCDC8-201ENST00000307522 SPRR2GQ9BYE4 73 aa6.55□□□□□ -1.36
CCDC8-201ENST00000307522 INE1O15225 51 aa6.5□□□□□ -1.37
CCDC8-201ENST00000307522 MT1BP07438 61 aa6.42□□□□□ -1.38
CCDC8-201ENST00000307522 KRTAP9-3Q9BYQ3 159 aa6.4□□□□□ -1.38
CCDC8-201ENST00000307522 LCE2BO14633 110 aa6.35□□□□□ -1.39
CCDC8-201ENST00000307522 MT1XP80297 61 aa6.31□□□□□ -1.4
CCDC8-201ENST00000307522 KRTAP10-5P60370 271 aa6.3□□□□□ -1.4
CCDC8-201ENST00000307522 KRTAP12-3P60328 96 aa6.28□□□□□ -1.4
CCDC8-201ENST00000307522 KRTAP10-7P60409 375 aaPredicted RBP6.27□□□□□ -1.41
CCDC8-201ENST00000307522 LCE2AQ5TA79 106 aaPredicted RBP6.26□□□□□ -1.41
CCDC8-201ENST00000307522 KRTAP19-8Q3LI54 63 aa6.25□□□□□ -1.41
CCDC8-201ENST00000307522 KRTAP8-1Q8IUC2 63 aa6.24□□□□□ -1.41
CCDC8-201ENST00000307522 KRTAP10-12P60413 245 aa6.21□□□□□ -1.42
CCDC8-201ENST00000307522 SSPOA2VEC9 5147 aa6.16□□□□□ -1.42
CCDC8-201ENST00000307522 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
CCDC8-201ENST00000307522 KRTAP4-8Q9BYQ9 185 aa6.12□□□□□ -1.43
CCDC8-201ENST00000307522 KRTAP9-6A8MVA2 160 aa5.93□□□□□ -1.46
CCDC8-201ENST00000307522 KRTAP19-5Q3LI72 72 aa5.91□□□□□ -1.46
CCDC8-201ENST00000307522 MUC12Q9UKN1 5478 aa5.89□□□□□ -1.47
CCDC8-201ENST00000307522 DSTQ03001 7570 aaKnown RBP5.88□□□□□ -1.47
CCDC8-201ENST00000307522 LCE3CQ5T5A8 94 aa5.88□□□□□ -1.47
CCDC8-201ENST00000307522 KRTAP4-7Q9BYR0 210 aa5.88□□□□□ -1.47
CCDC8-201ENST00000307522 FCGBPQ9Y6R7 5405 aaPredicted RBP5.86□□□□□ -1.47
CCDC8-201ENST00000307522 MACF1Q9UPN3 7388 aaKnown RBP5.71□□□□□ -1.49
CCDC8-201ENST00000307522 SYNE2Q8WXH0 6885 aaKnown RBP5.71□□□□□ -1.49
CCDC8-201ENST00000307522 KRTAP19-7Q3SYF9 63 aa5.61□□□□□ -1.51
CCDC8-201ENST00000307522 KRTAP2-3P0C7H8 128 aa5.6□□□□□ -1.51
CCDC8-201ENST00000307522 KRTAP2-4Q9BYR9 128 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms