RNA–Protein interactions for RNA: ENST00000296181.8

ITGB5-201, Transcript of integrin subunit beta 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB5, Length 4,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-201ENST00000296181 KRTAP10-4P60372 401 aaPredicted RBP8.82□□□□□ -1
ITGB5-201ENST00000296181 VPS13DQ5THJ4 4388 aa8.82□□□□□ -1
ITGB5-201ENST00000296181 FAT1Q14517 4588 aa8.81□□□□□ -1
ITGB5-201ENST00000296181 KMT2AQ03164 3969 aa8.75□□□□□ -1.01
ITGB5-201ENST00000296181 LRP1BQ9NZR2 4599 aa8.75□□□□□ -1.01
ITGB5-201ENST00000296181 DNAH8Q96JB1 4490 aa8.74□□□□□ -1.01
ITGB5-201ENST00000296181 LYSTQ99698 3801 aa8.74□□□□□ -1.01
ITGB5-201ENST00000296181 DNAH17Q9UFH2 4485 aa8.72□□□□□ -1.01
ITGB5-201ENST00000296181 MT1HL1P0DM35 61 aa8.7□□□□□ -1.02
ITGB5-201ENST00000296181 KRTAP15-1Q3LI76 137 aa8.7□□□□□ -1.02
ITGB5-201ENST00000296181 DNAH2Q9P225 4427 aa8.65□□□□□ -1.03
ITGB5-201ENST00000296181 DYNC1H1Q14204 4646 aaKnown RBP8.6□□□□□ -1.03
ITGB5-201ENST00000296181 KRTAP4-5Q9BYR2 181 aa8.57□□□□□ -1.04
ITGB5-201ENST00000296181 KRTAP10-10P60014 251 aa8.55□□□□□ -1.04
ITGB5-201ENST00000296181 MYCBP2O75592 4640 aa8.51□□□□□ -1.05
ITGB5-201ENST00000296181 CMYA5Q8N3K9 4069 aa8.5□□□□□ -1.05
ITGB5-201ENST00000296181 DNAH7Q8WXX0 4024 aa8.49□□□□□ -1.05
ITGB5-201ENST00000296181 DNAH3Q8TD57 4116 aa8.49□□□□□ -1.05
ITGB5-201ENST00000296181 FRAS1Q86XX4 4008 aa8.48□□□□□ -1.05
ITGB5-201ENST00000296181 ALMS1Q8TCU4 4167 aa8.43□□□□□ -1.06
ITGB5-201ENST00000296181 DNAH6Q9C0G6 4158 aa8.41□□□□□ -1.06
ITGB5-201ENST00000296181 VPS13BQ7Z7G8 4022 aa8.41□□□□□ -1.06
ITGB5-201ENST00000296181 RYR1P21817 5038 aa8.38□□□□□ -1.07
ITGB5-201ENST00000296181 DYNC2H1Q8NCM8 4307 aaKnown RBP8.37□□□□□ -1.07
ITGB5-201ENST00000296181 LORP23490 312 aaPredicted RBP8.35□□□□□ -1.07
ITGB5-201ENST00000296181 KIAA1109Q2LD37 5005 aa8.34□□□□□ -1.07
ITGB5-201ENST00000296181 SACSQ9NZJ4 4579 aa8.32□□□□□ -1.08
ITGB5-201ENST00000296181 HECTD4Q9Y4D8 3996 aa8.27□□□□□ -1.09
ITGB5-201ENST00000296181 LRP1Q07954 4544 aaKnown RBP8.26□□□□□ -1.09
ITGB5-201ENST00000296181 FAT3Q8TDW7 4589 aa8.23□□□□□ -1.09
ITGB5-201ENST00000296181 FAT2Q9NYQ8 4349 aa8.19□□□□□ -1.1
ITGB5-201ENST00000296181 HYDINQ4G0P3 5121 aa8.19□□□□□ -1.1
ITGB5-201ENST00000296181 APOBP04114 4563 aaKnown RBP8.17□□□□□ -1.1
ITGB5-201ENST00000296181 RYR3Q15413 4870 aa8.14□□□□□ -1.11
ITGB5-201ENST00000296181 PKHD1P08F94 4074 aa8.12□□□□□ -1.11
ITGB5-201ENST00000296181 PRO2289Q9P1D8 64 aa8.07□□□□□ -1.12
ITGB5-201ENST00000296181 KRTAP17-1Q9BYP8 105 aa8.01□□□□□ -1.13
ITGB5-201ENST00000296181 KRTAP4-1Q9BYQ7 146 aa8□□□□□ -1.13
ITGB5-201ENST00000296181 LRP2P98164 4655 aa7.87□□□□□ -1.15
ITGB5-201ENST00000296181 RYR2Q92736 4967 aa7.84□□□□□ -1.15
ITGB5-201ENST00000296181 KMT2CQ8NEZ4 4911 aaKnown RBP7.83□□□□□ -1.16
ITGB5-201ENST00000296181 LCE3AQ5TA76 89 aa7.82□□□□□ -1.16
ITGB5-201ENST00000296181 KRTAP10-12P60413 245 aa7.73□□□□□ -1.17
ITGB5-201ENST00000296181 PKD1P98161 4303 aa7.71□□□□□ -1.17
ITGB5-201ENST00000296181 KRTAP23-1A1A580 65 aa7.71□□□□□ -1.18
ITGB5-201ENST00000296181 KRTAP12-3P60328 96 aa7.69□□□□□ -1.18
ITGB5-201ENST00000296181 HERC2O95714 4834 aa7.65□□□□□ -1.18
ITGB5-201ENST00000296181 INE1O15225 51 aa7.63□□□□□ -1.19
ITGB5-201ENST00000296181 HSPG2P98160 4391 aa7.62□□□□□ -1.19
ITGB5-201ENST00000296181 LPAP08519 4548 aa7.53□□□□□ -1.2
ITGB5-201ENST00000296181 MT1HP80294 61 aa7.4□□□□□ -1.22
ITGB5-201ENST00000296181 SPRR2GQ9BYE4 73 aa7.36□□□□□ -1.23
ITGB5-201ENST00000296181 EPPK1P58107 5090 aaKnown RBP7.35□□□□□ -1.23
ITGB5-201ENST00000296181 MT2AP02795 61 aa7.34□□□□□ -1.23
ITGB5-201ENST00000296181 PKHD1L1Q86WI1 4243 aa7.32□□□□□ -1.24
ITGB5-201ENST00000296181 MT1FP04733 61 aa7.3□□□□□ -1.24
ITGB5-201ENST00000296181 TNXBP22105 4242 aa7.26□□□□□ -1.25
ITGB5-201ENST00000296181 CRCT1Q9UGL9 99 aa7.26□□□□□ -1.25
ITGB5-201ENST00000296181 ABCA13Q86UQ4 5058 aa7.22□□□□□ -1.25
ITGB5-201ENST00000296181 KRTAP19-1Q8IUB9 90 aa7.18□□□□□ -1.26
ITGB5-201ENST00000296181 KRTAP8-1Q8IUC2 63 aa7.15□□□□□ -1.26
ITGB5-201ENST00000296181 PCLOQ9Y6V0 5065 aa7.13□□□□□ -1.27
ITGB5-201ENST00000296181 BIRC6Q9NR09 4857 aa7.11□□□□□ -1.27
ITGB5-201ENST00000296181 HERC1Q15751 4861 aa7.06□□□□□ -1.28
ITGB5-201ENST00000296181 MUC2Q02817 5179 aa7.04□□□□□ -1.28
ITGB5-201ENST00000296181 SPRR5A0A1B0GTR4 108 aa7□□□□□ -1.29
ITGB5-201ENST00000296181 LCE2CQ5TA81 110 aa6.99□□□□□ -1.29
ITGB5-201ENST00000296181 KRTAP19-5Q3LI72 72 aa6.98□□□□□ -1.29
ITGB5-201ENST00000296181 MUC17Q685J3 4493 aa6.95□□□□□ -1.3
ITGB5-201ENST00000296181 KRTAP10-7P60409 375 aaPredicted RBP6.95□□□□□ -1.3
ITGB5-201ENST00000296181 KRTAP19-2Q3LHN2 52 aa6.95□□□□□ -1.3
ITGB5-201ENST00000296181 RNF213Q63HN8 5207 aa6.91□□□□□ -1.3
ITGB5-201ENST00000296181 KRTAP10-5P60370 271 aa6.88□□□□□ -1.31
ITGB5-201ENST00000296181 LCE3CQ5T5A8 94 aa6.87□□□□□ -1.31
ITGB5-201ENST00000296181 FAT4Q6V0I7 4981 aa6.87□□□□□ -1.31
ITGB5-201ENST00000296181 KRTAP9-8Q9BYQ0 159 aa6.87□□□□□ -1.31
ITGB5-201ENST00000296181 MT1XP80297 61 aa6.86□□□□□ -1.31
ITGB5-201ENST00000296181 KRTAP19-8Q3LI54 63 aa6.85□□□□□ -1.31
ITGB5-201ENST00000296181 FLGP20930 4061 aaPredicted RBP6.82□□□□□ -1.32
ITGB5-201ENST00000296181 MT1BP07438 61 aa6.8□□□□□ -1.32
ITGB5-201ENST00000296181 UBR4Q5T4S7 5183 aa6.79□□□□□ -1.32
ITGB5-201ENST00000296181 FSIP2Q5CZC0 6907 aa6.7□□□□□ -1.34
ITGB5-201ENST00000296181 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
ITGB5-201ENST00000296181 KRTAP4-8Q9BYQ9 185 aa6.62□□□□□ -1.35
ITGB5-201ENST00000296181 KRTAP9-3Q9BYQ3 159 aa6.61□□□□□ -1.35
ITGB5-201ENST00000296181 HMCN2Q8NDA2 5059 aa6.58□□□□□ -1.36
ITGB5-201ENST00000296181 LCE2BO14633 110 aa6.44□□□□□ -1.38
ITGB5-201ENST00000296181 KRTAP4-7Q9BYR0 210 aa6.42□□□□□ -1.38
ITGB5-201ENST00000296181 SPRR2FQ96RM1 72 aa6.38□□□□□ -1.39
ITGB5-201ENST00000296181 SYNE1Q8NF91 8797 aaKnown RBP6.32□□□□□ -1.4
ITGB5-201ENST00000296181 MT1GP13640 62 aa6.28□□□□□ -1.4
ITGB5-201ENST00000296181 KRTAP12-4P60329 112 aa6.27□□□□□ -1.4
ITGB5-201ENST00000296181 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
ITGB5-201ENST00000296181 LCE3BQ5TA77 95 aa6.18□□□□□ -1.42
ITGB5-201ENST00000296181 OBSCNQ5VST9 7968 aa6.14□□□□□ -1.43
ITGB5-201ENST00000296181 USH2AO75445 5202 aa6.12□□□□□ -1.43
ITGB5-201ENST00000296181 MT1LQ93083 61 aa6.1□□□□□ -1.43
ITGB5-201ENST00000296181 MT1EP04732 61 aa6.03□□□□□ -1.44
ITGB5-201ENST00000296181 KMT2DO14686 5537 aa5.98□□□□□ -1.45
ITGB5-201ENST00000296181 LCE2AQ5TA79 106 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms